RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 KCNQ2O43526 872 aa16.62■□□□□ 0.25
COPB1-206ENST00000529210 PANK3Q9H999 370 aa16.62■□□□□ 0.25
COPB1-206ENST00000529210 ZCRB1Q8TBF4 217 aaKnown RBP16.61■□□□□ 0.25
COPB1-206ENST00000529210 POLKQ9UBT6 870 aa16.61■□□□□ 0.25
COPB1-206ENST00000529210 PLEKHG2Q9H7P9 1386 aa16.61■□□□□ 0.25
COPB1-206ENST00000529210 PKD1L3Q7Z443 1732 aa16.59■□□□□ 0.25
COPB1-206ENST00000529210 TXNRD1Q16881 649 aa16.59■□□□□ 0.25
COPB1-206ENST00000529210 POLR3GLQ9BT43 218 aa16.59■□□□□ 0.25
COPB1-206ENST00000529210 PAPPAQ13219 1627 aa16.59■□□□□ 0.25
COPB1-206ENST00000529210 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
COPB1-206ENST00000529210 DDX54Q8TDD1 881 aaKnown RBP16.58■□□□□ 0.24
COPB1-206ENST00000529210 RAPGEF4Q8WZA2 1011 aa16.58■□□□□ 0.24
COPB1-206ENST00000529210 ACSBG1Q96GR2 724 aa16.58■□□□□ 0.24
COPB1-206ENST00000529210 KIF7Q2M1P5 1343 aa16.58■□□□□ 0.24
COPB1-206ENST00000529210 CASZ1Q86V15 1759 aa16.58■□□□□ 0.24
COPB1-206ENST00000529210 TATP17735 454 aaPredicted RBP16.57■□□□□ 0.24
COPB1-206ENST00000529210 ANO8Q9HCE9 1232 aaPredicted RBP16.57■□□□□ 0.24
COPB1-206ENST00000529210 USHBP1Q8N6Y0 703 aa16.56■□□□□ 0.24
COPB1-206ENST00000529210 KAT6BQ8WYB5 2073 aa16.56■□□□□ 0.24
COPB1-206ENST00000529210 PCDH11XQ9BZA7 1347 aa16.55■□□□□ 0.24
COPB1-206ENST00000529210 PCDH11YQ9BZA8 1340 aa16.55■□□□□ 0.24
COPB1-206ENST00000529210 LY75O60449 1722 aa16.55■□□□□ 0.24
COPB1-206ENST00000529210 AMER1Q5JTC6 1135 aaPredicted RBP16.54■□□□□ 0.24
COPB1-206ENST00000529210 EYA1Q99502 592 aa16.54■□□□□ 0.24
COPB1-206ENST00000529210 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.54■□□□□ 0.24
COPB1-206ENST00000529210 KNSTRNQ9Y448 316 aa16.54■□□□□ 0.24
COPB1-206ENST00000529210 SLC15A2Q16348 729 aa16.53■□□□□ 0.24
COPB1-206ENST00000529210 SLC27A3Q5K4L6 730 aa16.53■□□□□ 0.24
COPB1-206ENST00000529210 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.24
COPB1-206ENST00000529210 PER1O15534 1290 aaPredicted RBP16.52■□□□□ 0.24
COPB1-206ENST00000529210 PRIM1P49642 420 aaKnown RBP16.52■□□□□ 0.24
COPB1-206ENST00000529210 EIF4A2Q14240 407 aaKnown RBP16.52■□□□□ 0.24
COPB1-206ENST00000529210 NKX1-1Q15270 411 aaPredicted RBP16.52■□□□□ 0.24
COPB1-206ENST00000529210 QSER1Q2KHR3 1735 aa16.52■□□□□ 0.24
COPB1-206ENST00000529210 IGSF1Q8N6C5 1336 aa16.51■□□□□ 0.23
COPB1-206ENST00000529210 CYP27B1O15528 508 aa16.51■□□□□ 0.23
COPB1-206ENST00000529210 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
COPB1-206ENST00000529210 MORC1Q86VD1 984 aa16.5■□□□□ 0.23
COPB1-206ENST00000529210 SPON1Q9HCB6 807 aa16.5■□□□□ 0.23
COPB1-206ENST00000529210 LRRC4BQ9NT99 713 aa16.5■□□□□ 0.23
COPB1-206ENST00000529210 TOGARAM1Q9Y4F4 1720 aa16.5■□□□□ 0.23
COPB1-206ENST00000529210 NPC1L1Q9UHC9 1359 aa16.5■□□□□ 0.23
COPB1-206ENST00000529210 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
COPB1-206ENST00000529210 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
COPB1-206ENST00000529210 ITGB4P16144 1822 aa16.47■□□□□ 0.23
COPB1-206ENST00000529210 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
COPB1-206ENST00000529210 SYTL4Q96C24 671 aaPredicted RBP16.47■□□□□ 0.23
COPB1-206ENST00000529210 HMGB2P26583 209 aaKnown RBP16.46■□□□□ 0.23
COPB1-206ENST00000529210 PDGFDQ9GZP0 370 aaPredicted RBP16.45■□□□□ 0.22
COPB1-206ENST00000529210 KDRP35968 1356 aa16.45■□□□□ 0.22
COPB1-206ENST00000529210 COL24A1Q17RW2 1714 aa16.45■□□□□ 0.22
COPB1-206ENST00000529210 ZNF827Q17R98 1081 aa16.44■□□□□ 0.22
COPB1-206ENST00000529210 IFNL2Q8IZJ0 200 aa16.44■□□□□ 0.22
COPB1-206ENST00000529210 PHKG2P15735 406 aa16.43■□□□□ 0.22
COPB1-206ENST00000529210 MTFR1LQ9H019 292 aa16.43■□□□□ 0.22
COPB1-206ENST00000529210 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
COPB1-206ENST00000529210 IL13P35225 146 aa16.42■□□□□ 0.22
COPB1-206ENST00000529210 PTGER2P43116 358 aa16.42■□□□□ 0.22
COPB1-206ENST00000529210 SGIP1Q9BQI5 828 aa16.42■□□□□ 0.22
COPB1-206ENST00000529210 TAF1LQ8IZX4 1826 aa16.42■□□□□ 0.22
COPB1-206ENST00000529210 C5P01031 1676 aa16.41■□□□□ 0.22
COPB1-206ENST00000529210 AMOTQ4VCS5 1084 aa16.41■□□□□ 0.22
COPB1-206ENST00000529210 SLC16A10Q8TF71 515 aa16.41■□□□□ 0.22
COPB1-206ENST00000529210 SMARCC1Q92922 1105 aaPredicted RBP16.41■□□□□ 0.22
COPB1-206ENST00000529210 CCNL1Q9UK58 526 aaPredicted RBP16.41■□□□□ 0.22
COPB1-206ENST00000529210 PALLDQ8WX93 1383 aa16.4■□□□□ 0.22
COPB1-206ENST00000529210 PIGBQ92521 554 aa16.4■□□□□ 0.22
COPB1-206ENST00000529210 ZBTB7AO95365 584 aa16.39■□□□□ 0.21
COPB1-206ENST00000529210 HSP90AB1P08238 724 aaKnown RBP16.39■□□□□ 0.21
COPB1-206ENST00000529210 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
COPB1-206ENST00000529210 MPRIPQ6WCQ1 1025 aa16.39■□□□□ 0.21
COPB1-206ENST00000529210 PNPLA7Q6ZV29 1317 aa16.39■□□□□ 0.21
COPB1-206ENST00000529210 ZNF831Q5JPB2 1677 aa16.38■□□□□ 0.21
COPB1-206ENST00000529210 MTHFSP49914 203 aa16.38■□□□□ 0.21
COPB1-206ENST00000529210 ERVV-2B6SEH9 535 aa16.37■□□□□ 0.21
COPB1-206ENST00000529210 DCAF5Q96JK2 942 aa16.37■□□□□ 0.21
COPB1-206ENST00000529210 PPP1R1BQ9UD71 204 aaPredicted RBP16.37■□□□□ 0.21
COPB1-206ENST00000529210 COL3A1P02461 1466 aaPredicted RBP16.36■□□□□ 0.21
COPB1-206ENST00000529210 KCNQ4P56696 695 aa16.36■□□□□ 0.21
COPB1-206ENST00000529210 CC2D1BQ5T0F9 858 aaKnown RBP16.36■□□□□ 0.21
COPB1-206ENST00000529210 SULT6B1Q6IMI4 303 aa16.36■□□□□ 0.21
COPB1-206ENST00000529210 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
COPB1-206ENST00000529210 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
COPB1-206ENST00000529210 MAP3K5Q99683 1374 aa16.36■□□□□ 0.21
COPB1-206ENST00000529210 TFCP2L1Q9NZI6 479 aa16.35■□□□□ 0.21
COPB1-206ENST00000529210 ATF5Q9Y2D1 282 aaPredicted RBP16.35■□□□□ 0.21
COPB1-206ENST00000529210 C4BP0C0L5 1744 aa16.35■□□□□ 0.21
COPB1-206ENST00000529210 KDM6AO15550 1401 aaPredicted RBP16.35■□□□□ 0.21
COPB1-206ENST00000529210 LOC102724428A0A0B4J2F2 783 aa16.33■□□□□ 0.2
COPB1-206ENST00000529210 SIK1P57059 783 aa16.33■□□□□ 0.2
COPB1-206ENST00000529210 ZNF530Q6P9A1 599 aaPredicted RBP16.33■□□□□ 0.2
COPB1-206ENST00000529210 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.2
COPB1-206ENST00000529210 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.2
COPB1-206ENST00000529210 UBR3Q6ZT12 1888 aa16.33■□□□□ 0.2
COPB1-206ENST00000529210 DIAPH1O60610 1272 aaKnown RBP16.32■□□□□ 0.2
COPB1-206ENST00000529210 ADAMTS7Q9UKP4 1686 aa16.32■□□□□ 0.2
COPB1-206ENST00000529210 ASAP1Q9ULH1 1129 aa16.32■□□□□ 0.2
COPB1-206ENST00000529210 CICQ96RK0 1608 aaPredicted RBP16.31■□□□□ 0.2
COPB1-206ENST00000529210 ATG3Q9NT62 314 aa16.31■□□□□ 0.2
COPB1-206ENST00000529210 C1orf141Q5JVX7 400 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms