RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 MON2Q7Z3U7 1717 aa20.28■□□□□ 0.84
TRIM3-208ENST00000529058 PRIM1P49642 420 aaKnown RBP20.28■□□□□ 0.84
TRIM3-208ENST00000529058 NSD2O96028 1365 aa20.27■□□□□ 0.84
TRIM3-208ENST00000529058 DNAJC5GQ8N7S2 189 aa20.27■□□□□ 0.84
TRIM3-208ENST00000529058 USP31Q70CQ4 1352 aa20.26■□□□□ 0.83
TRIM3-208ENST00000529058 FAM208AQ9UK61 1670 aaKnown RBP20.25■□□□□ 0.83
TRIM3-208ENST00000529058 C5P01031 1676 aa20.24■□□□□ 0.83
TRIM3-208ENST00000529058 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRIM3-208ENST00000529058 IGSF1Q8N6C5 1336 aa20.22■□□□□ 0.83
TRIM3-208ENST00000529058 USP47Q96K76 1375 aa20.21■□□□□ 0.83
TRIM3-208ENST00000529058 TAF1LQ8IZX4 1826 aa20.2■□□□□ 0.82
TRIM3-208ENST00000529058 WDR90Q96KV7 1748 aa20.2■□□□□ 0.82
TRIM3-208ENST00000529058 TOMM70O94826 608 aa20.2■□□□□ 0.82
TRIM3-208ENST00000529058 FLAD1Q8NFF5 587 aa20.2■□□□□ 0.82
TRIM3-208ENST00000529058 WWC3Q9ULE0 1092 aa20.2■□□□□ 0.82
TRIM3-208ENST00000529058 COL13A1Q5TAT6 717 aaPredicted RBP20.19■□□□□ 0.82
TRIM3-208ENST00000529058 NME9Q86XW9 330 aa20.19■□□□□ 0.82
TRIM3-208ENST00000529058 CICQ96RK0 1608 aaPredicted RBP20.18■□□□□ 0.82
TRIM3-208ENST00000529058 CAPN15O75808 1086 aa20.18■□□□□ 0.82
TRIM3-208ENST00000529058 HMGB2P26583 209 aaKnown RBP20.16■□□□□ 0.82
TRIM3-208ENST00000529058 LTV1Q96GA3 475 aaPredicted RBP20.16■□□□□ 0.82
TRIM3-208ENST00000529058 ZCRB1Q8TBF4 217 aaKnown RBP20.15■□□□□ 0.82
TRIM3-208ENST00000529058 IP6K1Q92551 441 aa20.15■□□□□ 0.82
TRIM3-208ENST00000529058 SBNO2Q9Y2G9 1366 aa20.15■□□□□ 0.82
TRIM3-208ENST00000529058 RGPD2P0DJD1 1756 aa20.15■□□□□ 0.82
TRIM3-208ENST00000529058 CD163L1Q9NR16 1453 aa20.12■□□□□ 0.81
TRIM3-208ENST00000529058 PRELPP51888 382 aa20.12■□□□□ 0.81
TRIM3-208ENST00000529058 JMYQ8N9B5 988 aa20.12■□□□□ 0.81
TRIM3-208ENST00000529058 KLRG1Q96E93 195 aa20.12■□□□□ 0.81
TRIM3-208ENST00000529058 C4BP0C0L5 1744 aa20.12■□□□□ 0.81
TRIM3-208ENST00000529058 TOGARAM1Q9Y4F4 1720 aa20.12■□□□□ 0.81
TRIM3-208ENST00000529058 MEGF6O75095 1541 aa20.12■□□□□ 0.81
TRIM3-208ENST00000529058 UBR3Q6ZT12 1888 aa20.11■□□□□ 0.81
TRIM3-208ENST00000529058 TNS4Q8IZW8 715 aa20.11■□□□□ 0.81
TRIM3-208ENST00000529058 EDC4Q6P2E9 1401 aaKnown RBP20.09■□□□□ 0.81
TRIM3-208ENST00000529058 PCNTO95613 3336 aa20.09■□□□□ 0.81
TRIM3-208ENST00000529058 PALLDQ8WX93 1383 aa20.08■□□□□ 0.81
TRIM3-208ENST00000529058 RBM46Q8TBY0 533 aaKnown RBP20.08■□□□□ 0.81
TRIM3-208ENST00000529058 AK7Q96M32 723 aa20.08■□□□□ 0.81
TRIM3-208ENST00000529058 NMRK2Q9NPI5 230 aa20.08■□□□□ 0.81
TRIM3-208ENST00000529058 HTRA3P83110 453 aa20.07■□□□□ 0.8
TRIM3-208ENST00000529058 HDGFL2Q7Z4V5 671 aaPredicted RBP20.07■□□□□ 0.8
TRIM3-208ENST00000529058 AMIGO3Q86WK7 504 aa20.07■□□□□ 0.8
TRIM3-208ENST00000529058 PHF14O94880 888 aa20.06■□□□□ 0.8
TRIM3-208ENST00000529058 NSD3Q9BZ95 1437 aa20.06■□□□□ 0.8
TRIM3-208ENST00000529058 KIF13BQ9NQT8 1826 aa20.06■□□□□ 0.8
TRIM3-208ENST00000529058 TMC1Q8TDI8 760 aa20.05■□□□□ 0.8
TRIM3-208ENST00000529058 N4BP2Q86UW6 1770 aaPredicted RBP20.05■□□□□ 0.8
TRIM3-208ENST00000529058 KIAA1551Q9HCM1 1747 aa20.05■□□□□ 0.8
TRIM3-208ENST00000529058 CGNL1Q0VF96 1302 aa20.04■□□□□ 0.8
TRIM3-208ENST00000529058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.04■□□□□ 0.8
TRIM3-208ENST00000529058 HOXC9P31274 260 aa20.04■□□□□ 0.8
TRIM3-208ENST00000529058 ROCK2O75116 1388 aaKnown RBP20.04■□□□□ 0.8
TRIM3-208ENST00000529058 ITGB4P16144 1822 aa20.04■□□□□ 0.8
TRIM3-208ENST00000529058 SMIM5Q71RC9 77 aa20.03■□□□□ 0.8
TRIM3-208ENST00000529058 C16orf71Q8IYS4 520 aaPredicted RBP20.03■□□□□ 0.8
TRIM3-208ENST00000529058 PXDNLA1KZ92 1463 aa20.03■□□□□ 0.8
TRIM3-208ENST00000529058 MAP3K19Q56UN5 1328 aa20.02■□□□□ 0.8
TRIM3-208ENST00000529058 SSFA2P28290 1259 aa20.02■□□□□ 0.8
TRIM3-208ENST00000529058 AMPHP49418 695 aa20.02■□□□□ 0.8
TRIM3-208ENST00000529058 FSTL1Q12841 308 aa20.02■□□□□ 0.8
TRIM3-208ENST00000529058 MPRIPQ6WCQ1 1025 aa20.02■□□□□ 0.8
TRIM3-208ENST00000529058 L3MBTL2Q969R5 705 aa20.01■□□□□ 0.79
TRIM3-208ENST00000529058 SLC12A5Q9H2X9 1139 aa20.01■□□□□ 0.79
TRIM3-208ENST00000529058 BCS1LQ9Y276 419 aa20.01■□□□□ 0.79
TRIM3-208ENST00000529058 A0A1W2PP64 1363 aa20■□□□□ 0.79
TRIM3-208ENST00000529058 RAPGEF4Q8WZA2 1011 aa20■□□□□ 0.79
TRIM3-208ENST00000529058 SMARCC1Q92922 1105 aaPredicted RBP20■□□□□ 0.79
TRIM3-208ENST00000529058 NBPF6Q5VWK0 638 aa19.99■□□□□ 0.79
TRIM3-208ENST00000529058 ARHGAP27Q6ZUM4 889 aa19.99■□□□□ 0.79
TRIM3-208ENST00000529058 NBPF4Q96M43 638 aa19.99■□□□□ 0.79
TRIM3-208ENST00000529058 TERF2IPQ9NYB0 399 aa19.99■□□□□ 0.79
TRIM3-208ENST00000529058 PCDH11XQ9BZA7 1347 aa19.99■□□□□ 0.79
TRIM3-208ENST00000529058 PCDH11YQ9BZA8 1340 aa19.99■□□□□ 0.79
TRIM3-208ENST00000529058 MAP2P11137 1827 aaKnown RBP19.98■□□□□ 0.79
TRIM3-208ENST00000529058 TGFB2P61812 414 aa19.98■□□□□ 0.79
TRIM3-208ENST00000529058 BRCA1P38398 1863 aaKnown RBP19.98■□□□□ 0.79
TRIM3-208ENST00000529058 PKD1L3Q7Z443 1732 aa19.97■□□□□ 0.79
TRIM3-208ENST00000529058 TATP17735 454 aaPredicted RBP19.97■□□□□ 0.79
TRIM3-208ENST00000529058 USHBP1Q8N6Y0 703 aa19.97■□□□□ 0.79
TRIM3-208ENST00000529058 PLEKHG2Q9H7P9 1386 aa19.96■□□□□ 0.79
TRIM3-208ENST00000529058 MMP10P09238 476 aa19.96■□□□□ 0.79
TRIM3-208ENST00000529058 FBLN1P23142 703 aa19.96■□□□□ 0.79
TRIM3-208ENST00000529058 COG3Q96JB2 828 aa19.96■□□□□ 0.79
TRIM3-208ENST00000529058 RTL1A6NKG5 1358 aa19.95■□□□□ 0.79
TRIM3-208ENST00000529058 A0A0G2JLW4 131 aa19.95■□□□□ 0.78
TRIM3-208ENST00000529058 ARFGEF1Q9Y6D6 1849 aa19.95■□□□□ 0.78
TRIM3-208ENST00000529058 C9orf131Q5VYM1 1079 aa19.94■□□□□ 0.78
TRIM3-208ENST00000529058 LINC00116Q8NCU8 138 aa19.94■□□□□ 0.78
TRIM3-208ENST00000529058 TNRC6CQ9HCJ0 1690 aaKnown RBP19.94■□□□□ 0.78
TRIM3-208ENST00000529058 C10orf71Q711Q0 1435 aa19.93■□□□□ 0.78
TRIM3-208ENST00000529058 KCPQ6ZWJ8 1503 aa19.93■□□□□ 0.78
TRIM3-208ENST00000529058 FCHSD2O94868 740 aa19.93■□□□□ 0.78
TRIM3-208ENST00000529058 KDM2BQ8NHM5 1336 aa19.93■□□□□ 0.78
TRIM3-208ENST00000529058 SMG6Q86US8 1419 aaKnown RBP19.93■□□□□ 0.78
TRIM3-208ENST00000529058 LOC102724428A0A0B4J2F2 783 aa19.92■□□□□ 0.78
TRIM3-208ENST00000529058 GNPATO15228 680 aa19.92■□□□□ 0.78
TRIM3-208ENST00000529058 SIK1P57059 783 aa19.92■□□□□ 0.78
TRIM3-208ENST00000529058 CYP27B1O15528 508 aa19.91■□□□□ 0.78
TRIM3-208ENST00000529058 PIGBQ92521 554 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms