RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 ADCY9O60503 1353 aa25.49■■□□□ 1.67
LTBP3-211ENST00000528966 ROCK2O75116 1388 aaKnown RBP25.48■■□□□ 1.67
LTBP3-211ENST00000528966 HSPA6P17066 643 aa25.48■■□□□ 1.67
LTBP3-211ENST00000528966 GPBP1L1Q9HC44 474 aaPredicted RBP25.48■■□□□ 1.67
LTBP3-211ENST00000528966 MSL1Q68DK7 614 aa25.47■■□□□ 1.67
LTBP3-211ENST00000528966 CCNL1Q9UK58 526 aaPredicted RBP25.47■■□□□ 1.67
LTBP3-211ENST00000528966 MSH5O43196 834 aa25.46■■□□□ 1.67
LTBP3-211ENST00000528966 IP6K1Q92551 441 aa25.45■■□□□ 1.66
LTBP3-211ENST00000528966 RGPD2P0DJD1 1756 aa25.45■■□□□ 1.66
LTBP3-211ENST00000528966 LTV1Q96GA3 475 aaPredicted RBP25.44■■□□□ 1.66
LTBP3-211ENST00000528966 EDC4Q6P2E9 1401 aaKnown RBP25.44■■□□□ 1.66
LTBP3-211ENST00000528966 C5P01031 1676 aa25.43■■□□□ 1.66
LTBP3-211ENST00000528966 ZNF526Q8TF50 670 aaPredicted RBP25.43■■□□□ 1.66
LTBP3-211ENST00000528966 CD2APQ9Y5K6 639 aa25.42■■□□□ 1.66
LTBP3-211ENST00000528966 MEGF6O75095 1541 aa25.41■■□□□ 1.66
LTBP3-211ENST00000528966 SLC12A5Q9H2X9 1139 aa25.4■■□□□ 1.66
LTBP3-211ENST00000528966 HDGFL2Q7Z4V5 671 aaPredicted RBP25.39■■□□□ 1.66
LTBP3-211ENST00000528966 ZCRB1Q8TBF4 217 aaKnown RBP25.39■■□□□ 1.66
LTBP3-211ENST00000528966 TMC1Q8TDI8 760 aa25.39■■□□□ 1.66
LTBP3-211ENST00000528966 USP47Q96K76 1375 aa25.39■■□□□ 1.65
LTBP3-211ENST00000528966 TAF1LQ8IZX4 1826 aa25.39■■□□□ 1.65
LTBP3-211ENST00000528966 A0A1W2PP64 1363 aa25.37■■□□□ 1.65
LTBP3-211ENST00000528966 HOXC9P31274 260 aa25.34■■□□□ 1.65
LTBP3-211ENST00000528966 MAP3K19Q56UN5 1328 aa25.34■■□□□ 1.65
LTBP3-211ENST00000528966 TOGARAM1Q9Y4F4 1720 aa25.32■■□□□ 1.64
LTBP3-211ENST00000528966 KIF3CO14782 793 aa25.32■■□□□ 1.64
LTBP3-211ENST00000528966 SIN3AQ96ST3 1273 aa25.32■■□□□ 1.64
LTBP3-211ENST00000528966 FBLN1P23142 703 aa25.31■■□□□ 1.64
LTBP3-211ENST00000528966 TERF2IPQ9NYB0 399 aa25.31■■□□□ 1.64
LTBP3-211ENST00000528966 WWC3Q9ULE0 1092 aa25.31■■□□□ 1.64
LTBP3-211ENST00000528966 AMIGO3Q86WK7 504 aa25.3■■□□□ 1.64
LTBP3-211ENST00000528966 FLAD1Q8NFF5 587 aa25.3■■□□□ 1.64
LTBP3-211ENST00000528966 IGSF1Q8N6C5 1336 aa25.3■■□□□ 1.64
LTBP3-211ENST00000528966 C4BP0C0L5 1744 aa25.29■■□□□ 1.64
LTBP3-211ENST00000528966 UBR3Q6ZT12 1888 aa25.29■■□□□ 1.64
LTBP3-211ENST00000528966 PALLDQ8WX93 1383 aa25.28■■□□□ 1.64
LTBP3-211ENST00000528966 AMPHP49418 695 aa25.27■■□□□ 1.64
LTBP3-211ENST00000528966 NBPF6Q5VWK0 638 aa25.27■■□□□ 1.64
LTBP3-211ENST00000528966 NBPF4Q96M43 638 aa25.27■■□□□ 1.64
LTBP3-211ENST00000528966 USHBP1Q8N6Y0 703 aa25.25■■□□□ 1.63
LTBP3-211ENST00000528966 CICQ96RK0 1608 aaPredicted RBP25.25■■□□□ 1.63
LTBP3-211ENST00000528966 ITGB4P16144 1822 aa25.24■■□□□ 1.63
LTBP3-211ENST00000528966 CGNL1Q0VF96 1302 aa25.24■■□□□ 1.63
LTBP3-211ENST00000528966 SMIM5Q71RC9 77 aa25.24■■□□□ 1.63
LTBP3-211ENST00000528966 COG3Q96JB2 828 aa25.24■■□□□ 1.63
LTBP3-211ENST00000528966 APLP1P51693 650 aa25.22■■□□□ 1.63
LTBP3-211ENST00000528966 NEUROD1Q13562 356 aa25.22■■□□□ 1.63
LTBP3-211ENST00000528966 DNAJC5GQ8N7S2 189 aa25.22■■□□□ 1.63
LTBP3-211ENST00000528966 RTL1A6NKG5 1358 aa25.21■■□□□ 1.63
LTBP3-211ENST00000528966 CARD11Q9BXL7 1154 aa25.21■■□□□ 1.63
LTBP3-211ENST00000528966 PHF14O94880 888 aa25.2■■□□□ 1.62
LTBP3-211ENST00000528966 HMGB2P26583 209 aaKnown RBP25.2■■□□□ 1.62
LTBP3-211ENST00000528966 MPRIPQ6WCQ1 1025 aa25.2■■□□□ 1.62
LTBP3-211ENST00000528966 RAPGEF4Q8WZA2 1011 aa25.2■■□□□ 1.62
LTBP3-211ENST00000528966 AK7Q96M32 723 aa25.2■■□□□ 1.62
LTBP3-211ENST00000528966 PUS7Q96PZ0 661 aaKnown RBP25.2■■□□□ 1.62
LTBP3-211ENST00000528966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.19■■□□□ 1.62
LTBP3-211ENST00000528966 MAP2P11137 1827 aaKnown RBP25.19■■□□□ 1.62
LTBP3-211ENST00000528966 PCDH11XQ9BZA7 1347 aa25.18■■□□□ 1.62
LTBP3-211ENST00000528966 PCDH11YQ9BZA8 1340 aa25.18■■□□□ 1.62
LTBP3-211ENST00000528966 RRS1Q15050 365 aaKnown RBP25.18■■□□□ 1.62
LTBP3-211ENST00000528966 KIAA1551Q9HCM1 1747 aa25.17■■□□□ 1.62
LTBP3-211ENST00000528966 TATP17735 454 aaPredicted RBP25.16■■□□□ 1.62
LTBP3-211ENST00000528966 NSD3Q9BZ95 1437 aa25.15■■□□□ 1.62
LTBP3-211ENST00000528966 KIF13BQ9NQT8 1826 aa25.15■■□□□ 1.62
LTBP3-211ENST00000528966 CYP27B1O15528 508 aa25.15■■□□□ 1.62
LTBP3-211ENST00000528966 SMG6Q86US8 1419 aaKnown RBP25.14■■□□□ 1.62
LTBP3-211ENST00000528966 TOMM70O94826 608 aa25.14■■□□□ 1.62
LTBP3-211ENST00000528966 SMARCC1Q92922 1105 aaPredicted RBP25.14■■□□□ 1.62
LTBP3-211ENST00000528966 WDR90Q96KV7 1748 aa25.13■■□□□ 1.61
LTBP3-211ENST00000528966 SSFA2P28290 1259 aa25.13■■□□□ 1.61
LTBP3-211ENST00000528966 PXDNLA1KZ92 1463 aa25.13■■□□□ 1.61
LTBP3-211ENST00000528966 N4BP2Q86UW6 1770 aaPredicted RBP25.13■■□□□ 1.61
LTBP3-211ENST00000528966 PKD1L3Q7Z443 1732 aa25.12■■□□□ 1.61
LTBP3-211ENST00000528966 PCNTO95613 3336 aa25.11■■□□□ 1.61
LTBP3-211ENST00000528966 LINC00116Q8NCU8 138 aa25.11■■□□□ 1.61
LTBP3-211ENST00000528966 PIGBQ92521 554 aa25.11■■□□□ 1.61
LTBP3-211ENST00000528966 INSRP06213 1382 aa25.09■■□□□ 1.61
LTBP3-211ENST00000528966 HSP90AB2PQ58FF8 381 aa25.09■■□□□ 1.61
LTBP3-211ENST00000528966 NMRK2Q9NPI5 230 aa25.09■■□□□ 1.61
LTBP3-211ENST00000528966 LOC102724428A0A0B4J2F2 783 aa25.08■■□□□ 1.61
LTBP3-211ENST00000528966 SIK1P57059 783 aa25.08■■□□□ 1.61
LTBP3-211ENST00000528966 TESK2Q96S53 571 aa25.08■■□□□ 1.61
LTBP3-211ENST00000528966 FYB1O15117 783 aa25.07■■□□□ 1.6
LTBP3-211ENST00000528966 GGNBP2Q9H3C7 697 aa25.07■■□□□ 1.6
LTBP3-211ENST00000528966 MMP10P09238 476 aa25.06■■□□□ 1.6
LTBP3-211ENST00000528966 BRCA1P38398 1863 aaKnown RBP25.05■■□□□ 1.6
LTBP3-211ENST00000528966 GNPATO15228 680 aa25.05■■□□□ 1.6
LTBP3-211ENST00000528966 ITPK1Q13572 414 aa25.05■■□□□ 1.6
LTBP3-211ENST00000528966 BCS1LQ9Y276 419 aa25.05■■□□□ 1.6
LTBP3-211ENST00000528966 COL13A1Q5TAT6 717 aaPredicted RBP25.04■■□□□ 1.6
LTBP3-211ENST00000528966 FLT4P35916 1363 aa25.04■■□□□ 1.6
LTBP3-211ENST00000528966 A0A0G2JLW4 131 aa25.03■■□□□ 1.6
LTBP3-211ENST00000528966 HTRA3P83110 453 aa25.03■■□□□ 1.6
LTBP3-211ENST00000528966 NKX1-1Q15270 411 aaPredicted RBP25.03■■□□□ 1.6
LTBP3-211ENST00000528966 C10orf71Q711Q0 1435 aa25.03■■□□□ 1.6
LTBP3-211ENST00000528966 TGFB2P61812 414 aa25.02■■□□□ 1.6
LTBP3-211ENST00000528966 KIF20BQ96Q89 1820 aa25.01■■□□□ 1.59
LTBP3-211ENST00000528966 ARHGAP27Q6ZUM4 889 aa25.01■■□□□ 1.59
LTBP3-211ENST00000528966 RBM46Q8TBY0 533 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms