RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 EYA1Q99502 592 aa19.45■□□□□ 0.7
CAPN1-216ENST00000528739 PRIM1P49642 420 aaKnown RBP19.44■□□□□ 0.7
CAPN1-216ENST00000528739 EIF4A2Q14240 407 aaKnown RBP19.44■□□□□ 0.7
CAPN1-216ENST00000528739 TXNRD1Q16881 649 aa19.44■□□□□ 0.7
CAPN1-216ENST00000528739 RGPD2P0DJD1 1756 aa19.43■□□□□ 0.7
CAPN1-216ENST00000528739 AMER1Q5JTC6 1135 aaPredicted RBP19.42■□□□□ 0.7
CAPN1-216ENST00000528739 SPG7Q9UQ90 795 aa19.42■□□□□ 0.7
CAPN1-216ENST00000528739 PCDH11XQ9BZA7 1347 aa19.42■□□□□ 0.7
CAPN1-216ENST00000528739 PCDH11YQ9BZA8 1340 aa19.42■□□□□ 0.7
CAPN1-216ENST00000528739 MAP2P11137 1827 aaKnown RBP19.41■□□□□ 0.7
CAPN1-216ENST00000528739 SBF2Q86WG5 1849 aa19.4■□□□□ 0.7
CAPN1-216ENST00000528739 PROM2Q8N271 834 aa19.4■□□□□ 0.7
CAPN1-216ENST00000528739 STK32BQ9NY57 414 aa19.4■□□□□ 0.7
CAPN1-216ENST00000528739 KAT6BQ8WYB5 2073 aa19.39■□□□□ 0.69
CAPN1-216ENST00000528739 PER1O15534 1290 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-216ENST00000528739 ANKRD26Q9UPS8 1709 aa19.38■□□□□ 0.69
CAPN1-216ENST00000528739 MTHFSP49914 203 aa19.37■□□□□ 0.69
CAPN1-216ENST00000528739 ANO8Q9HCE9 1232 aaPredicted RBP19.37■□□□□ 0.69
CAPN1-216ENST00000528739 CYP27B1O15528 508 aa19.36■□□□□ 0.69
CAPN1-216ENST00000528739 MPRIPQ6WCQ1 1025 aa19.36■□□□□ 0.69
CAPN1-216ENST00000528739 NHSQ6T4R5 1651 aa19.35■□□□□ 0.69
CAPN1-216ENST00000528739 RREB1Q92766 1687 aa19.33■□□□□ 0.69
CAPN1-216ENST00000528739 SLC15A2Q16348 729 aa19.33■□□□□ 0.68
CAPN1-216ENST00000528739 PLEKHO1Q53GL0 409 aaPredicted RBP19.33■□□□□ 0.68
CAPN1-216ENST00000528739 SULT6B1Q6IMI4 303 aa19.33■□□□□ 0.68
CAPN1-216ENST00000528739 IFNL2Q8IZJ0 200 aa19.33■□□□□ 0.68
CAPN1-216ENST00000528739 NUP188Q5SRE5 1749 aa19.33■□□□□ 0.68
CAPN1-216ENST00000528739 IGSF1Q8N6C5 1336 aa19.32■□□□□ 0.68
CAPN1-216ENST00000528739 KCNQ4P56696 695 aa19.32■□□□□ 0.68
CAPN1-216ENST00000528739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.32■□□□□ 0.682e-6■■□□□ 11.9
CAPN1-216ENST00000528739 SLC27A3Q5K4L6 730 aa19.31■□□□□ 0.68
CAPN1-216ENST00000528739 PPP1R1BQ9UD71 204 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-216ENST00000528739 CCNL1Q9UK58 526 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-216ENST00000528739 PHKG2P15735 406 aa19.3■□□□□ 0.68
CAPN1-216ENST00000528739 IL13P35225 146 aa19.3■□□□□ 0.68
CAPN1-216ENST00000528739 AEBP1Q8IUX7 1158 aa19.3■□□□□ 0.68
CAPN1-216ENST00000528739 SPON1Q9HCB6 807 aa19.3■□□□□ 0.68
CAPN1-216ENST00000528739 LRRC4BQ9NT99 713 aa19.3■□□□□ 0.68
CAPN1-216ENST00000528739 DIAPH1O60610 1272 aaKnown RBP19.29■□□□□ 0.68
CAPN1-216ENST00000528739 ZNF530Q6P9A1 599 aaPredicted RBP19.29■□□□□ 0.68
CAPN1-216ENST00000528739 BTAF1O14981 1849 aa19.29■□□□□ 0.68
CAPN1-216ENST00000528739 NCAPD2Q15021 1401 aa19.28■□□□□ 0.68
CAPN1-216ENST00000528739 ZBTB7AO95365 584 aa19.28■□□□□ 0.68
CAPN1-216ENST00000528739 HMOX1P09601 288 aa19.28■□□□□ 0.68
CAPN1-216ENST00000528739 AMOTQ4VCS5 1084 aa19.28■□□□□ 0.68
CAPN1-216ENST00000528739 C1orf141Q5JVX7 400 aa19.28■□□□□ 0.68
CAPN1-216ENST00000528739 TMOD3Q9NYL9 352 aa19.28■□□□□ 0.68
CAPN1-216ENST00000528739 RGPD3A6NKT7 1758 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-216ENST00000528739 RGPD4Q7Z3J3 1758 aa19.28■□□□□ 0.68
CAPN1-216ENST00000528739 DOT1LQ8TEK3 1739 aa19.28■□□□□ 0.68
CAPN1-216ENST00000528739 U2SURPO15042 1029 aaKnown RBP19.27■□□□□ 0.68
CAPN1-216ENST00000528739 NKX1-1Q15270 411 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-216ENST00000528739 PDGFDQ9GZP0 370 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-216ENST00000528739 SHANK3Q9BYB0 1731 aa19.26■□□□□ 0.67
CAPN1-216ENST00000528739 HSP90AB1P08238 724 aaKnown RBP19.26■□□□□ 0.67
CAPN1-216ENST00000528739 PIGBQ92521 554 aa19.26■□□□□ 0.67
CAPN1-216ENST00000528739 SMARCC1Q92922 1105 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-216ENST00000528739 TFCP2L1Q9NZI6 479 aa19.26■□□□□ 0.67
CAPN1-216ENST00000528739 ATF5Q9Y2D1 282 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-216ENST00000528739 NPC1L1Q9UHC9 1359 aa19.25■□□□□ 0.67
CAPN1-216ENST00000528739 MSH5O43196 834 aa19.25■□□□□ 0.67
CAPN1-216ENST00000528739 ZNF827Q17R98 1081 aa19.25■□□□□ 0.67
CAPN1-216ENST00000528739 CFAP53Q96M91 514 aa19.25■□□□□ 0.67
CAPN1-216ENST00000528739 PALLDQ8WX93 1383 aa19.23■□□□□ 0.67
CAPN1-216ENST00000528739 CABP4P57796 275 aa19.22■□□□□ 0.67
CAPN1-216ENST00000528739 DCAF5Q96JK2 942 aa19.22■□□□□ 0.67
CAPN1-216ENST00000528739 HMGB2P26583 209 aaKnown RBP19.21■□□□□ 0.67
CAPN1-216ENST00000528739 AKT1S1Q96B36 256 aa19.21■□□□□ 0.67
CAPN1-216ENST00000528739 PKD1L3Q7Z443 1732 aa19.2■□□□□ 0.66
CAPN1-216ENST00000528739 ASAP1Q9ULH1 1129 aa19.2■□□□□ 0.66
CAPN1-216ENST00000528739 LRP5O75197 1615 aa19.2■□□□□ 0.66
CAPN1-216ENST00000528739 SRCAPQ6ZRS2 3230 aa19.2■□□□□ 0.66
CAPN1-216ENST00000528739 ERVV-2B6SEH9 535 aa19.19■□□□□ 0.66
CAPN1-216ENST00000528739 MTFR1LQ9H019 292 aa19.19■□□□□ 0.66
CAPN1-216ENST00000528739 NUDCQ9Y266 331 aa19.19■□□□□ 0.66
CAPN1-216ENST00000528739 PPP2R1AP30153 589 aa19.18■□□□□ 0.66
CAPN1-216ENST00000528739 RBM42Q9BTD8 480 aaKnown RBP19.18■□□□□ 0.66
CAPN1-216ENST00000528739 PLEKHG2Q9H7P9 1386 aa19.18■□□□□ 0.66
CAPN1-216ENST00000528739 LOC102724428A0A0B4J2F2 783 aa19.17■□□□□ 0.66
CAPN1-216ENST00000528739 ATP6V1AP38606 617 aa19.17■□□□□ 0.66
CAPN1-216ENST00000528739 SIK1P57059 783 aa19.17■□□□□ 0.66
CAPN1-216ENST00000528739 AKAP4Q5JQC9 854 aa19.17■□□□□ 0.66
CAPN1-216ENST00000528739 AK7Q96M32 723 aa19.17■□□□□ 0.66
CAPN1-216ENST00000528739 KDRP35968 1356 aa19.17■□□□□ 0.66
CAPN1-216ENST00000528739 DDX10Q13206 875 aaKnown RBP19.16■□□□□ 0.66
CAPN1-216ENST00000528739 ATG3Q9NT62 314 aa19.16■□□□□ 0.66
CAPN1-216ENST00000528739 PNPLA7Q6ZV29 1317 aa19.15■□□□□ 0.66
CAPN1-216ENST00000528739 U2AF1L5P0DN76 240 aaPredicted RBP19.14■□□□□ 0.65
CAPN1-216ENST00000528739 U2AF1Q01081 240 aaKnown RBP eCLIP19.14■□□□□ 0.65
CAPN1-216ENST00000528739 MTHFSDQ2M296 383 aaKnown RBP19.14■□□□□ 0.65
CAPN1-216ENST00000528739 NFATC2IPQ8NCF5 419 aa19.14■□□□□ 0.65
CAPN1-216ENST00000528739 DCAF8L1A6NGE4 600 aa19.13■□□□□ 0.65
CAPN1-216ENST00000528739 PHF14O94880 888 aa19.13■□□□□ 0.65
CAPN1-216ENST00000528739 POLD1P28340 1107 aa19.13■□□□□ 0.65
CAPN1-216ENST00000528739 ZEB1P37275 1124 aaPredicted RBP19.13■□□□□ 0.65
CAPN1-216ENST00000528739 KLHL34Q8N239 644 aa19.13■□□□□ 0.65
CAPN1-216ENST00000528739 SLC16A10Q8TF71 515 aa19.13■□□□□ 0.65
CAPN1-216ENST00000528739 TOGARAM1Q9Y4F4 1720 aa19.13■□□□□ 0.65
CAPN1-216ENST00000528739 PAPPAQ13219 1627 aa19.11■□□□□ 0.65
CAPN1-216ENST00000528739 KDM6AO15550 1401 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms