RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 ELL2O00472 640 aaPredicted RBP9.91□□□□□ -0.82
SOX6-211ENST00000528429 BRINP3Q76B58 766 aa9.91□□□□□ -0.82
SOX6-211ENST00000528429 SLAIN2Q9P270 581 aa9.91□□□□□ -0.82
SOX6-211ENST00000528429 KIF24Q5T7B8 1368 aa9.9□□□□□ -0.82
SOX6-211ENST00000528429 MTHFSDQ2M296 383 aaKnown RBP9.9□□□□□ -0.82
SOX6-211ENST00000528429 ARHGEF25Q86VW2 580 aa9.9□□□□□ -0.82
SOX6-211ENST00000528429 LRRC59Q96AG4 307 aaKnown RBP9.9□□□□□ -0.82
SOX6-211ENST00000528429 SMC4Q9NTJ3 1288 aa9.9□□□□□ -0.82
SOX6-211ENST00000528429 MARF1Q9Y4F3 1742 aaKnown RBP9.9□□□□□ -0.82
SOX6-211ENST00000528429 RTL1A6NKG5 1358 aa9.9□□□□□ -0.82
SOX6-211ENST00000528429 GNAI1P63096 354 aa9.9□□□□□ -0.82
SOX6-211ENST00000528429 PANK1Q8TE04 598 aa9.9□□□□□ -0.82
SOX6-211ENST00000528429 CLUAP1Q96AJ1 413 aa9.9□□□□□ -0.82
SOX6-211ENST00000528429 NFAT5O94916 1531 aa9.89□□□□□ -0.83
SOX6-211ENST00000528429 KIF1AQ12756 1690 aa9.89□□□□□ -0.83
SOX6-211ENST00000528429 HSP90B1P14625 803 aaKnown RBP9.89□□□□□ -0.83
SOX6-211ENST00000528429 NBPF6Q5VWK0 638 aa9.89□□□□□ -0.83
SOX6-211ENST00000528429 RTF1Q92541 710 aaKnown RBP9.89□□□□□ -0.83
SOX6-211ENST00000528429 NBPF4Q96M43 638 aa9.89□□□□□ -0.83
SOX6-211ENST00000528429 MBIPQ9NS73 344 aa9.89□□□□□ -0.83
SOX6-211ENST00000528429 IFT57Q9NWB7 429 aa9.89□□□□□ -0.83
SOX6-211ENST00000528429 USP19O94966 1318 aa9.89□□□□□ -0.83
SOX6-211ENST00000528429 KDRP35968 1356 aa9.89□□□□□ -0.83
SOX6-211ENST00000528429 TNNQ9UQP3 1299 aa9.89□□□□□ -0.83
SOX6-211ENST00000528429 ANKRD24Q8TF21 1146 aa9.88□□□□□ -0.83
SOX6-211ENST00000528429 SSH1Q8WYL5 1049 aa9.88□□□□□ -0.83
SOX6-211ENST00000528429 NAP1L2Q9ULW6 460 aaPredicted RBP9.88□□□□□ -0.83
SOX6-211ENST00000528429 COG6Q9Y2V7 657 aa9.88□□□□□ -0.83
SOX6-211ENST00000528429 TCERG1O14776 1098 aaKnown RBP9.88□□□□□ -0.83
SOX6-211ENST00000528429 GAS2L2Q8NHY3 880 aa9.88□□□□□ -0.83
SOX6-211ENST00000528429 AXIN2Q9Y2T1 843 aa9.88□□□□□ -0.83
SOX6-211ENST00000528429 RGPD1P0DJD0 1748 aa9.87□□□□□ -0.83
SOX6-211ENST00000528429 CT47B1P0C2W7 299 aaPredicted RBP9.87□□□□□ -0.83
SOX6-211ENST00000528429 CHRNA2Q15822 529 aa9.87□□□□□ -0.83
SOX6-211ENST00000528429 TSPYL6Q8N831 410 aa9.87□□□□□ -0.83
SOX6-211ENST00000528429 USP54Q70EL1 1684 aa9.87□□□□□ -0.83
SOX6-211ENST00000528429 LTN1O94822 1766 aa9.87□□□□□ -0.83
SOX6-211ENST00000528429 MIS18AQ9NYP9 233 aa9.87□□□□□ -0.83
SOX6-211ENST00000528429 SPATA31A3Q5VYP0 1347 aa9.87□□□□□ -0.83
SOX6-211ENST00000528429 TRPM3Q9HCF6 1732 aaPredicted RBP9.86□□□□□ -0.83
SOX6-211ENST00000528429 TNS3Q68CZ2 1445 aa9.86□□□□□ -0.83
SOX6-211ENST00000528429 ZNF853P0CG23 659 aa9.86□□□□□ -0.83
SOX6-211ENST00000528429 RLBP1P12271 317 aa9.86□□□□□ -0.83
SOX6-211ENST00000528429 PDE3AQ14432 1141 aa9.86□□□□□ -0.83
SOX6-211ENST00000528429 FTSJ3Q8IY81 847 aaKnown RBP9.86□□□□□ -0.83
SOX6-211ENST00000528429 BCCIPQ9P287 314 aaKnown RBP eCLIP9.86□□□□□ -0.83
SOX6-211ENST00000528429 XIRP1Q702N8 1843 aaKnown RBP9.86□□□□□ -0.83
SOX6-211ENST00000528429 SLIT3O75094 1523 aa9.85□□□□□ -0.83
SOX6-211ENST00000528429 GNAT3A8MTJ3 354 aa9.85□□□□□ -0.83
SOX6-211ENST00000528429 CSB-PGBD3P0DP91 1061 aa9.85□□□□□ -0.83
SOX6-211ENST00000528429 KRT24Q2M2I5 525 aa9.85□□□□□ -0.83
SOX6-211ENST00000528429 TWISTNBQ3B726 338 aaPredicted RBP9.85□□□□□ -0.83
SOX6-211ENST00000528429 ZKSCAN2Q63HK3 967 aa9.85□□□□□ -0.83
SOX6-211ENST00000528429 C8orf58Q8NAV2 365 aa9.85□□□□□ -0.83
SOX6-211ENST00000528429 NLRP2Q9NX02 1062 aa9.85□□□□□ -0.83
SOX6-211ENST00000528429 PXDNQ92626 1479 aa9.85□□□□□ -0.83
SOX6-211ENST00000528429 DLG5Q8TDM6 1919 aa9.85□□□□□ -0.83
SOX6-211ENST00000528429 CHMP4BQ9H444 224 aaKnown RBP9.84□□□□□ -0.83
SOX6-211ENST00000528429 NOB1Q9ULX3 412 aaKnown RBP9.84□□□□□ -0.83
SOX6-211ENST00000528429 MED1Q15648 1581 aaPredicted RBP9.84□□□□□ -0.83
SOX6-211ENST00000528429 TSPYL4Q9UJ04 414 aa9.84□□□□□ -0.83
SOX6-211ENST00000528429 ERBB3P21860 1342 aa9.83□□□□□ -0.84
SOX6-211ENST00000528429 VAMP4O75379 141 aa9.83□□□□□ -0.84
SOX6-211ENST00000528429 TRIM27P14373 513 aa9.83□□□□□ -0.84
SOX6-211ENST00000528429 KIAA0232Q92628 1395 aa9.83□□□□□ -0.84
SOX6-211ENST00000528429 ALS2Q96Q42 1657 aa9.83□□□□□ -0.84
SOX6-211ENST00000528429 CHL1O00533 1208 aa9.83□□□□□ -0.84
SOX6-211ENST00000528429 ZNF530Q6P9A1 599 aaPredicted RBP9.83□□□□□ -0.84
SOX6-211ENST00000528429 DZIP1LQ8IYY4 767 aaKnown RBP9.83□□□□□ -0.84
SOX6-211ENST00000528429 ZFP91Q96JP5 570 aaPredicted RBP9.83□□□□□ -0.84
SOX6-211ENST00000528429 PRDM11Q9NQV5 511 aa9.83□□□□□ -0.84
SOX6-211ENST00000528429 BRPF3Q9ULD4 1205 aa9.83□□□□□ -0.84
SOX6-211ENST00000528429 MAP3K5Q99683 1374 aa9.83□□□□□ -0.84
SOX6-211ENST00000528429 KIF16BQ96L93 1317 aa9.82□□□□□ -0.84
SOX6-211ENST00000528429 SOS2Q07890 1332 aaPredicted RBP9.82□□□□□ -0.84
SOX6-211ENST00000528429 ALDH1L2Q3SY69 923 aa9.82□□□□□ -0.84
SOX6-211ENST00000528429 ATF7IPQ6VMQ6 1270 aa9.82□□□□□ -0.84
SOX6-211ENST00000528429 IL17REQ8NFR9 667 aa9.82□□□□□ -0.84
SOX6-211ENST00000528429 RBM19Q9Y4C8 960 aaKnown RBP9.82□□□□□ -0.84
SOX6-211ENST00000528429 PLEKHO1Q53GL0 409 aaPredicted RBP9.81□□□□□ -0.84
SOX6-211ENST00000528429 ITPRIPQ8IWB1 547 aa9.81□□□□□ -0.84
SOX6-211ENST00000528429 CRB1P82279 1406 aa9.81□□□□□ -0.84
SOX6-211ENST00000528429 IPO8O15397 1037 aaKnown RBP9.81□□□□□ -0.84
SOX6-211ENST00000528429 SKAP1Q86WV1 359 aa9.81□□□□□ -0.84
SOX6-211ENST00000528429 RAPGEF4Q8WZA2 1011 aa9.81□□□□□ -0.84
SOX6-211ENST00000528429 ZNF428Q96B54 188 aa9.81□□□□□ -0.84
SOX6-211ENST00000528429 C1orf141Q5JVX7 400 aa9.8□□□□□ -0.84
SOX6-211ENST00000528429 MPRIPQ6WCQ1 1025 aa9.8□□□□□ -0.84
SOX6-211ENST00000528429 IL27Q8NEV9 243 aa9.8□□□□□ -0.84
SOX6-211ENST00000528429 HTATSF1O43719 755 aaKnown RBP9.8□□□□□ -0.84
SOX6-211ENST00000528429 MS4A1P11836 297 aa9.8□□□□□ -0.84
SOX6-211ENST00000528429 LGR6Q9HBX8 967 aa9.8□□□□□ -0.84
SOX6-211ENST00000528429 MVPQ14764 893 aaKnown RBP9.79□□□□□ -0.84
SOX6-211ENST00000528429 PRDM10Q9NQV6 1147 aa9.79□□□□□ -0.84
SOX6-211ENST00000528429 RGPD2P0DJD1 1756 aa9.79□□□□□ -0.84
SOX6-211ENST00000528429 TMEM57Q8N5G2 664 aa9.79□□□□□ -0.84
SOX6-211ENST00000528429 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
SOX6-211ENST00000528429 NECTIN2Q92692 538 aa9.79□□□□□ -0.84
SOX6-211ENST00000528429 TEFQ10587 303 aa9.79□□□□□ -0.84
SOX6-211ENST00000528429 TAF7Q15545 349 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms