RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 APBB1O00213 710 aa17.87■□□□□ 0.45
CAPN1-214ENST00000528165 C8orf58Q8NAV2 365 aa17.87■□□□□ 0.45
CAPN1-214ENST00000528165 CCDC94Q9BW85 323 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-214ENST00000528165 KNDC1Q76NI1 1749 aa17.87■□□□□ 0.45
CAPN1-214ENST00000528165 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
CAPN1-214ENST00000528165 NEK4P51957 841 aa17.86■□□□□ 0.45
CAPN1-214ENST00000528165 MYRIPQ8NFW9 859 aa17.86■□□□□ 0.45
CAPN1-214ENST00000528165 TMX3Q96JJ7 454 aa17.86■□□□□ 0.45
CAPN1-214ENST00000528165 KIDINS220Q9ULH0 1771 aa17.86■□□□□ 0.45
CAPN1-214ENST00000528165 CD163L1Q9NR16 1453 aa17.86■□□□□ 0.45
CAPN1-214ENST00000528165 SMARCA5O60264 1052 aaPredicted RBP17.86■□□□□ 0.45
CAPN1-214ENST00000528165 PHF14O94880 888 aa17.85■□□□□ 0.45
CAPN1-214ENST00000528165 BRD1O95696 1058 aa17.85■□□□□ 0.45
CAPN1-214ENST00000528165 YEATS2Q9ULM3 1422 aa17.85■□□□□ 0.45
CAPN1-214ENST00000528165 MCM2P49736 904 aa17.85■□□□□ 0.45
CAPN1-214ENST00000528165 LMOD3Q0VAK6 560 aa17.85■□□□□ 0.45
CAPN1-214ENST00000528165 PRDM10Q9NQV6 1147 aa17.85■□□□□ 0.45
CAPN1-214ENST00000528165 POLKQ9UBT6 870 aa17.85■□□□□ 0.45
CAPN1-214ENST00000528165 ZBTB7CA1YPR0 619 aa17.84■□□□□ 0.45
CAPN1-214ENST00000528165 CEP85Q6P2H3 762 aa17.84■□□□□ 0.45
CAPN1-214ENST00000528165 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
CAPN1-214ENST00000528165 ATP10DQ9P241 1426 aa17.83■□□□□ 0.45
CAPN1-214ENST00000528165 FBLN1P23142 703 aa17.83■□□□□ 0.45
CAPN1-214ENST00000528165 PRIMPOLQ96LW4 560 aa17.83■□□□□ 0.45
CAPN1-214ENST00000528165 NEXMIFQ5QGS0 1516 aa17.83■□□□□ 0.44
CAPN1-214ENST00000528165 HMGN5P82970 282 aaKnown RBP17.83■□□□□ 0.44
CAPN1-214ENST00000528165 PRAM1Q96QH2 718 aa17.82■□□□□ 0.44
CAPN1-214ENST00000528165 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.82■□□□□ 0.44
CAPN1-214ENST00000528165 CABP1Q9NZU7 370 aa17.81■□□□□ 0.44
CAPN1-214ENST00000528165 FAM184AQ8NB25 1140 aa17.81■□□□□ 0.44
CAPN1-214ENST00000528165 PIBF1Q8WXW3 757 aa17.81■□□□□ 0.44
CAPN1-214ENST00000528165 ABCC3O15438 1527 aa17.8■□□□□ 0.44
CAPN1-214ENST00000528165 KIF20BQ96Q89 1820 aa17.8■□□□□ 0.44
CAPN1-214ENST00000528165 MCCP23508 829 aa17.8■□□□□ 0.44
CAPN1-214ENST00000528165 CUL4AQ13619 759 aa17.8■□□□□ 0.44
CAPN1-214ENST00000528165 UVSSAQ2YD98 709 aa17.8■□□□□ 0.44
CAPN1-214ENST00000528165 NOLC1Q14978 699 aaKnown RBP eCLIP17.79■□□□□ 0.44
CAPN1-214ENST00000528165 INTS4Q96HW7 963 aaKnown RBP17.79■□□□□ 0.44
CAPN1-214ENST00000528165 ASXL2Q76L83 1435 aa17.79■□□□□ 0.44
CAPN1-214ENST00000528165 RIMS2Q9UQ26 1411 aa17.79■□□□□ 0.44
CAPN1-214ENST00000528165 MPNDQ8N594 471 aa17.79■□□□□ 0.44
CAPN1-214ENST00000528165 DMTNQ08495 405 aa17.78■□□□□ 0.44
CAPN1-214ENST00000528165 UTP14CQ5TAP6 766 aaKnown RBP17.78■□□□□ 0.44
CAPN1-214ENST00000528165 NOL8Q76FK4 1167 aaKnown RBP17.78■□□□□ 0.44
CAPN1-214ENST00000528165 ZNF830Q96NB3 372 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-214ENST00000528165 CDK19Q9BWU1 502 aa17.78■□□□□ 0.44
CAPN1-214ENST00000528165 RTL1A6NKG5 1358 aa17.78■□□□□ 0.44
CAPN1-214ENST00000528165 PTPRMP28827 1452 aa17.78■□□□□ 0.44
CAPN1-214ENST00000528165 YTHDC2Q9H6S0 1430 aaKnown RBP17.78■□□□□ 0.44
CAPN1-214ENST00000528165 FAM83GA6ND36 823 aa17.78■□□□□ 0.44
CAPN1-214ENST00000528165 HAP1P54257 671 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-214ENST00000528165 FOXD4L6Q3SYB3 417 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-214ENST00000528165 FOXD4L3Q6VB84 417 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-214ENST00000528165 ZHX1Q9UKY1 873 aaPredicted RBP17.78■□□□□ 0.44
CAPN1-214ENST00000528165 HECW2Q9P2P5 1572 aa17.77■□□□□ 0.44
CAPN1-214ENST00000528165 HMMRO75330 724 aa17.77■□□□□ 0.44
CAPN1-214ENST00000528165 USP25Q9UHP3 1055 aa17.77■□□□□ 0.44
CAPN1-214ENST00000528165 MSH6P52701 1360 aa17.77■□□□□ 0.44
CAPN1-214ENST00000528165 IL13P35225 146 aa17.77■□□□□ 0.44
CAPN1-214ENST00000528165 GTF2F1P35269 517 aaKnown RBP eCLIP17.77■□□□□ 0.44
CAPN1-214ENST00000528165 JARID2Q92833 1246 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-214ENST00000528165 GDPD2Q9HCC8 539 aa17.77■□□□□ 0.44
CAPN1-214ENST00000528165 FRMPD1Q5SYB0 1578 aa17.77■□□□□ 0.43
CAPN1-214ENST00000528165 PIK3C2BO00750 1634 aa17.77■□□□□ 0.43
CAPN1-214ENST00000528165 GADD45BO75293 160 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-214ENST00000528165 PDE1AP54750 535 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 TSC1Q92574 1164 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 OSBPL3Q9H4L5 887 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 EMILIN1Q9Y6C2 1016 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 CLTCQ00610 1675 aaKnown RBP17.76■□□□□ 0.43
CAPN1-214ENST00000528165 MEIS3Q99687 375 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 PODXL2Q9NZ53 605 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 ARHGEF40Q8TER5 1519 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 DCTN1Q14203 1278 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 USP48Q86UV5 1035 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 ZNF710Q8N1W2 664 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 TTC12Q9H892 705 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-214ENST00000528165 KIF3AQ9Y496 699 aa17.76■□□□□ 0.43
CAPN1-214ENST00000528165 ZSCAN20P17040 1043 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-214ENST00000528165 ADCY5O95622 1261 aa17.75■□□□□ 0.43
CAPN1-214ENST00000528165 ESYT1Q9BSJ8 1104 aa17.75■□□□□ 0.43
CAPN1-214ENST00000528165 WDR33Q9C0J8 1336 aaKnown RBP17.75■□□□□ 0.43
CAPN1-214ENST00000528165 ANAPC15P60006 121 aa17.74■□□□□ 0.43
CAPN1-214ENST00000528165 RGS12O14924 1447 aa17.74■□□□□ 0.43
CAPN1-214ENST00000528165 CCDC183Q5T5S1 534 aa17.73■□□□□ 0.43
CAPN1-214ENST00000528165 ANO2Q9NQ90 1003 aa17.73■□□□□ 0.43
CAPN1-214ENST00000528165 PALD1Q9ULE6 856 aa17.73■□□□□ 0.43
CAPN1-214ENST00000528165 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
CAPN1-214ENST00000528165 IDI1Q13907 227 aa17.73■□□□□ 0.43
CAPN1-214ENST00000528165 KRT24Q2M2I5 525 aa17.73■□□□□ 0.43
CAPN1-214ENST00000528165 C17orf53Q8N3J3 647 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-214ENST00000528165 PTPRCP08575 1304 aa17.73■□□□□ 0.43
CAPN1-214ENST00000528165 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
CAPN1-214ENST00000528165 CBX1P83916 185 aa17.72■□□□□ 0.43
CAPN1-214ENST00000528165 FKBP5Q13451 457 aaPredicted RBP17.72■□□□□ 0.43
CAPN1-214ENST00000528165 SPTLC3Q9NUV7 552 aa17.72■□□□□ 0.43
CAPN1-214ENST00000528165 SIGLEC1Q9BZZ2 1709 aa17.72■□□□□ 0.43
CAPN1-214ENST00000528165 LETM1O95202 739 aaPredicted RBP17.71■□□□□ 0.43
CAPN1-214ENST00000528165 PPP4R3BQ5MIZ7 849 aa17.71■□□□□ 0.43
CAPN1-214ENST00000528165 DLG5Q8TDM6 1919 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms