RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 PKD1L3Q7Z443 1732 aa17.61■□□□□ 0.41
CNKSR1-211ENST00000528001 USHBP1Q8N6Y0 703 aa17.61■□□□□ 0.41
CNKSR1-211ENST00000528001 EP400Q96L91 3159 aa17.61■□□□□ 0.41
CNKSR1-211ENST00000528001 PCDH11XQ9BZA7 1347 aa17.59■□□□□ 0.41
CNKSR1-211ENST00000528001 PCDH11YQ9BZA8 1340 aa17.59■□□□□ 0.41
CNKSR1-211ENST00000528001 SHANK3Q9BYB0 1731 aa17.58■□□□□ 0.41
CNKSR1-211ENST00000528001 SPG7Q9UQ90 795 aa17.58■□□□□ 0.4
CNKSR1-211ENST00000528001 MYBBP1AQ9BQG0 1328 aaKnown RBP17.57■□□□□ 0.4
CNKSR1-211ENST00000528001 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
CNKSR1-211ENST00000528001 NUDCQ9Y266 331 aa17.57■□□□□ 0.4
CNKSR1-211ENST00000528001 SF3B2Q13435 895 aaKnown RBP17.56■□□□□ 0.4
CNKSR1-211ENST00000528001 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
CNKSR1-211ENST00000528001 AMOTQ4VCS5 1084 aa17.56■□□□□ 0.4
CNKSR1-211ENST00000528001 NKX1-1Q15270 411 aaPredicted RBP17.55■□□□□ 0.4
CNKSR1-211ENST00000528001 FAM182BQ5T319 152 aa17.55■□□□□ 0.4
CNKSR1-211ENST00000528001 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
CNKSR1-211ENST00000528001 TNS1Q9HBL0 1735 aaKnown RBP17.55■□□□□ 0.4
CNKSR1-211ENST00000528001 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
CNKSR1-211ENST00000528001 SBF2Q86WG5 1849 aa17.54■□□□□ 0.4
CNKSR1-211ENST00000528001 NHSQ6T4R5 1651 aa17.53■□□□□ 0.4
CNKSR1-211ENST00000528001 PLEKHO1Q53GL0 409 aaPredicted RBP17.53■□□□□ 0.4
CNKSR1-211ENST00000528001 DDX54Q8TDD1 881 aaKnown RBP17.53■□□□□ 0.4
CNKSR1-211ENST00000528001 CYP27B1O15528 508 aa17.52■□□□□ 0.4
CNKSR1-211ENST00000528001 BAG6P46379 1132 aa17.52■□□□□ 0.4
CNKSR1-211ENST00000528001 AEBP1Q8IUX7 1158 aa17.52■□□□□ 0.4
CNKSR1-211ENST00000528001 RGPD3A6NKT7 1758 aaPredicted RBP17.52■□□□□ 0.4
CNKSR1-211ENST00000528001 RGPD4Q7Z3J3 1758 aa17.52■□□□□ 0.4
CNKSR1-211ENST00000528001 TRIM37O94972 964 aa17.51■□□□□ 0.39
CNKSR1-211ENST00000528001 IFNL2Q8IZJ0 200 aa17.51■□□□□ 0.39
CNKSR1-211ENST00000528001 PLSCR1O15162 318 aa17.5■□□□□ 0.39
CNKSR1-211ENST00000528001 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
CNKSR1-211ENST00000528001 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
CNKSR1-211ENST00000528001 FCHSD2O94868 740 aa17.49■□□□□ 0.39
CNKSR1-211ENST00000528001 PHKG2P15735 406 aa17.49■□□□□ 0.39
CNKSR1-211ENST00000528001 HMOX1P09601 288 aa17.47■□□□□ 0.39
CNKSR1-211ENST00000528001 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
CNKSR1-211ENST00000528001 APBA3O96018 575 aa17.46■□□□□ 0.39
CNKSR1-211ENST00000528001 DCAF5Q96JK2 942 aa17.46■□□□□ 0.39
CNKSR1-211ENST00000528001 PNNQ9H307 717 aaKnown RBP17.46■□□□□ 0.39
CNKSR1-211ENST00000528001 DOT1LQ8TEK3 1739 aa17.46■□□□□ 0.39
CNKSR1-211ENST00000528001 ANP32CO43423 234 aa17.45■□□□□ 0.38
CNKSR1-211ENST00000528001 U2AF1L5P0DN76 240 aaPredicted RBP17.45■□□□□ 0.38
CNKSR1-211ENST00000528001 U2AF1Q01081 240 aaKnown RBP eCLIP17.45■□□□□ 0.38
CNKSR1-211ENST00000528001 AKAP4Q5JQC9 854 aa17.45■□□□□ 0.38
CNKSR1-211ENST00000528001 C1orf141Q5JVX7 400 aa17.45■□□□□ 0.38
CNKSR1-211ENST00000528001 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
CNKSR1-211ENST00000528001 CAMKK2Q96RR4 588 aa17.45■□□□□ 0.38
CNKSR1-211ENST00000528001 GAS2L2Q8NHY3 880 aa17.44■□□□□ 0.38
CNKSR1-211ENST00000528001 ERVV-2B6SEH9 535 aa17.43■□□□□ 0.38
CNKSR1-211ENST00000528001 KCNQ2O43526 872 aa17.43■□□□□ 0.38
CNKSR1-211ENST00000528001 DEFB132Q7Z7B7 95 aa17.43■□□□□ 0.38
CNKSR1-211ENST00000528001 ACSBG1Q96GR2 724 aa17.43■□□□□ 0.38
CNKSR1-211ENST00000528001 TOGARAM1Q9Y4F4 1720 aa17.43■□□□□ 0.38
CNKSR1-211ENST00000528001 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
CNKSR1-211ENST00000528001 PRKAR2BP31323 418 aa17.42■□□□□ 0.38
CNKSR1-211ENST00000528001 PRIM1P49642 420 aaKnown RBP17.42■□□□□ 0.38
CNKSR1-211ENST00000528001 BTAF1O14981 1849 aa17.42■□□□□ 0.38
CNKSR1-211ENST00000528001 RREB1Q92766 1687 aa17.42■□□□□ 0.38
CNKSR1-211ENST00000528001 HMGB2P26583 209 aaKnown RBP17.41■□□□□ 0.38
CNKSR1-211ENST00000528001 EN1Q05925 392 aaPredicted RBP17.41■□□□□ 0.38
CNKSR1-211ENST00000528001 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
CNKSR1-211ENST00000528001 PTF1AQ7RTS3 328 aa17.41■□□□□ 0.38
CNKSR1-211ENST00000528001 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
CNKSR1-211ENST00000528001 MRC1P22897 1456 aa17.39■□□□□ 0.37
CNKSR1-211ENST00000528001 NEFMP07197 916 aa17.39■□□□□ 0.37
CNKSR1-211ENST00000528001 PLEKHF1Q96S99 279 aa17.39■□□□□ 0.37
CNKSR1-211ENST00000528001 EZH2Q15910 746 aaKnown RBP17.38■□□□□ 0.37
CNKSR1-211ENST00000528001 SLC27A3Q5K4L6 730 aa17.38■□□□□ 0.37
CNKSR1-211ENST00000528001 SMARCC1Q92922 1105 aaPredicted RBP17.38■□□□□ 0.37
CNKSR1-211ENST00000528001 SYTL4Q96C24 671 aaPredicted RBP17.38■□□□□ 0.37
CNKSR1-211ENST00000528001 MAP3K5Q99683 1374 aa17.38■□□□□ 0.37
CNKSR1-211ENST00000528001 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
CNKSR1-211ENST00000528001 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
CNKSR1-211ENST00000528001 TMOD3Q9NYL9 352 aa17.37■□□□□ 0.37
CNKSR1-211ENST00000528001 SCN11AQ9UI33 1791 aa17.37■□□□□ 0.37
CNKSR1-211ENST00000528001 ITGB4P16144 1822 aa17.37■□□□□ 0.37
CNKSR1-211ENST00000528001 GNAT3A8MTJ3 354 aa17.36■□□□□ 0.37
CNKSR1-211ENST00000528001 WDR43Q15061 677 aaKnown RBP eCLIP17.36■□□□□ 0.37
CNKSR1-211ENST00000528001 PIGBQ92521 554 aa17.36■□□□□ 0.37
CNKSR1-211ENST00000528001 LY75O60449 1722 aa17.35■□□□□ 0.37
CNKSR1-211ENST00000528001 RNMTO43148 476 aaKnown RBP17.35■□□□□ 0.37
CNKSR1-211ENST00000528001 TXNRD1Q16881 649 aa17.35■□□□□ 0.37
CNKSR1-211ENST00000528001 MPRIPQ6WCQ1 1025 aa17.35■□□□□ 0.37
CNKSR1-211ENST00000528001 PROM2Q8N271 834 aa17.35■□□□□ 0.37
CNKSR1-211ENST00000528001 CEMIPQ8WUJ3 1361 aa17.35■□□□□ 0.37
CNKSR1-211ENST00000528001 NUP188Q5SRE5 1749 aa17.35■□□□□ 0.37
CNKSR1-211ENST00000528001 MAPK8IP3Q9UPT6 1336 aa17.33■□□□□ 0.36
CNKSR1-211ENST00000528001 CABP4P57796 275 aa17.33■□□□□ 0.36
CNKSR1-211ENST00000528001 SLC52A2Q9HAB3 445 aa17.33■□□□□ 0.36
CNKSR1-211ENST00000528001 ZNF831Q5JPB2 1677 aa17.32■□□□□ 0.36
CNKSR1-211ENST00000528001 PALLDQ8WX93 1383 aa17.32■□□□□ 0.36
CNKSR1-211ENST00000528001 NBPF14Q5TI25 921 aa17.32■□□□□ 0.36
CNKSR1-211ENST00000528001 NFE2L2Q16236 605 aa17.31■□□□□ 0.36
CNKSR1-211ENST00000528001 RUNDC1Q96C34 613 aa17.31■□□□□ 0.36
CNKSR1-211ENST00000528001 LGR6Q9HBX8 967 aa17.31■□□□□ 0.36
CNKSR1-211ENST00000528001 ADAMTS8Q9UP79 889 aa17.31■□□□□ 0.36
CNKSR1-211ENST00000528001 PAPPAQ13219 1627 aa17.31■□□□□ 0.36
CNKSR1-211ENST00000528001 NFATC2IPQ8NCF5 419 aa17.3■□□□□ 0.36
CNKSR1-211ENST00000528001 IL17REQ8NFR9 667 aa17.3■□□□□ 0.36
CNKSR1-211ENST00000528001 RTF1Q92541 710 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms