RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
LINC00958-203ENST00000527945 MEGF6O75095 1541 aa12.59□□□□□ -0.39
LINC00958-203ENST00000527945 CC2D1BQ5T0F9 858 aaKnown RBP12.59□□□□□ -0.39
LINC00958-203ENST00000527945 PLEKHG2Q9H7P9 1386 aa12.58□□□□□ -0.4
LINC00958-203ENST00000527945 PKD1L3Q7Z443 1732 aa12.58□□□□□ -0.4
LINC00958-203ENST00000527945 LTV1Q96GA3 475 aaPredicted RBP12.58□□□□□ -0.4
LINC00958-203ENST00000527945 PROM2Q8N271 834 aa12.57□□□□□ -0.4
LINC00958-203ENST00000527945 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
LINC00958-203ENST00000527945 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
LINC00958-203ENST00000527945 R3HDM1Q15032 1099 aaKnown RBP12.56□□□□□ -0.4
LINC00958-203ENST00000527945 NBPF6Q5VWK0 638 aa12.56□□□□□ -0.4
LINC00958-203ENST00000527945 MORC1Q86VD1 984 aa12.56□□□□□ -0.4
LINC00958-203ENST00000527945 NBPF4Q96M43 638 aa12.56□□□□□ -0.4
LINC00958-203ENST00000527945 RREB1Q92766 1687 aa12.56□□□□□ -0.4
LINC00958-203ENST00000527945 CNGB1Q14028 1251 aaPredicted RBP12.55□□□□□ -0.4
LINC00958-203ENST00000527945 USHBP1Q8N6Y0 703 aa12.55□□□□□ -0.4
LINC00958-203ENST00000527945 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
LINC00958-203ENST00000527945 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
LINC00958-203ENST00000527945 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
LINC00958-203ENST00000527945 EIF4A2Q14240 407 aaKnown RBP12.54□□□□□ -0.4
LINC00958-203ENST00000527945 NBPF14Q5TI25 921 aa12.54□□□□□ -0.4
LINC00958-203ENST00000527945 PTF1AQ7RTS3 328 aa12.54□□□□□ -0.4
LINC00958-203ENST00000527945 RAPGEF4Q8WZA2 1011 aa12.54□□□□□ -0.4
LINC00958-203ENST00000527945 PPM1GO15355 546 aaPredicted RBP12.53□□□□□ -0.4
LINC00958-203ENST00000527945 ZCRB1Q8TBF4 217 aaKnown RBP12.53□□□□□ -0.4
LINC00958-203ENST00000527945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC00958-203ENST00000527945 DOT1LQ8TEK3 1739 aa12.53□□□□□ -0.4
LINC00958-203ENST00000527945 TATP17735 454 aaPredicted RBP12.52□□□□□ -0.41
LINC00958-203ENST00000527945 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
LINC00958-203ENST00000527945 HMGB2P26583 209 aaKnown RBP12.51□□□□□ -0.41
LINC00958-203ENST00000527945 MTHFSP49914 203 aa12.51□□□□□ -0.41
LINC00958-203ENST00000527945 EYA1Q99502 592 aa12.51□□□□□ -0.41
LINC00958-203ENST00000527945 NUP188Q5SRE5 1749 aa12.51□□□□□ -0.41
LINC00958-203ENST00000527945 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
LINC00958-203ENST00000527945 KCNQ2O43526 872 aa12.5□□□□□ -0.41
LINC00958-203ENST00000527945 IL13P35225 146 aa12.5□□□□□ -0.41
LINC00958-203ENST00000527945 TXNRD1Q16881 649 aa12.5□□□□□ -0.41
LINC00958-203ENST00000527945 IGSF1Q8N6C5 1336 aa12.5□□□□□ -0.41
LINC00958-203ENST00000527945 PCDH11XQ9BZA7 1347 aa12.49□□□□□ -0.41
LINC00958-203ENST00000527945 PCDH11YQ9BZA8 1340 aa12.49□□□□□ -0.41
LINC00958-203ENST00000527945 PPP2R1AP30153 589 aa12.49□□□□□ -0.41
LINC00958-203ENST00000527945 ANO8Q9HCE9 1232 aaPredicted RBP12.49□□□□□ -0.41
LINC00958-203ENST00000527945 BTAF1O14981 1849 aa12.48□□□□□ -0.41
LINC00958-203ENST00000527945 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
LINC00958-203ENST00000527945 AEBP1Q8IUX7 1158 aa12.48□□□□□ -0.41
LINC00958-203ENST00000527945 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
LINC00958-203ENST00000527945 SPG7Q9UQ90 795 aa12.48□□□□□ -0.41
LINC00958-203ENST00000527945 ITGB4P16144 1822 aa12.48□□□□□ -0.41
LINC00958-203ENST00000527945 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
LINC00958-203ENST00000527945 KDRP35968 1356 aa12.46□□□□□ -0.41
LINC00958-203ENST00000527945 NKX1-1Q15270 411 aaPredicted RBP12.46□□□□□ -0.41
LINC00958-203ENST00000527945 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
LINC00958-203ENST00000527945 SLC15A2Q16348 729 aa12.45□□□□□ -0.42
LINC00958-203ENST00000527945 AMOTQ4VCS5 1084 aa12.45□□□□□ -0.42
LINC00958-203ENST00000527945 SLC27A3Q5K4L6 730 aa12.45□□□□□ -0.42
LINC00958-203ENST00000527945 ADAMTS7Q9UKP4 1686 aa12.44□□□□□ -0.42
LINC00958-203ENST00000527945 HSP90AB1P08238 724 aaKnown RBP12.43□□□□□ -0.42
LINC00958-203ENST00000527945 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
LINC00958-203ENST00000527945 LRRC4BQ9NT99 713 aa12.43□□□□□ -0.42
LINC00958-203ENST00000527945 PAPPAQ13219 1627 aa12.43□□□□□ -0.42
LINC00958-203ENST00000527945 SCN11AQ9UI33 1791 aa12.43□□□□□ -0.42
LINC00958-203ENST00000527945 CYP27B1O15528 508 aa12.42□□□□□ -0.42
LINC00958-203ENST00000527945 PTGER2P43116 358 aa12.42□□□□□ -0.42
LINC00958-203ENST00000527945 PRIM1P49642 420 aaKnown RBP12.42□□□□□ -0.42
LINC00958-203ENST00000527945 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
LINC00958-203ENST00000527945 IFNL2Q8IZJ0 200 aa12.42□□□□□ -0.42
LINC00958-203ENST00000527945 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
LINC00958-203ENST00000527945 ACSBG1Q96GR2 724 aa12.42□□□□□ -0.42
LINC00958-203ENST00000527945 STK32BQ9NY57 414 aa12.42□□□□□ -0.42
LINC00958-203ENST00000527945 KAT6BQ8WYB5 2073 aa12.42□□□□□ -0.42
LINC00958-203ENST00000527945 LY75O60449 1722 aa12.42□□□□□ -0.42
LINC00958-203ENST00000527945 CASZ1Q86V15 1759 aa12.41□□□□□ -0.42
LINC00958-203ENST00000527945 DLG5Q8TDM6 1919 aa12.41□□□□□ -0.42
LINC00958-203ENST00000527945 SULT6B1Q6IMI4 303 aa12.41□□□□□ -0.42
LINC00958-203ENST00000527945 KDM6AO15550 1401 aaPredicted RBP12.4□□□□□ -0.42
LINC00958-203ENST00000527945 DIAPH1O60610 1272 aaKnown RBP12.4□□□□□ -0.42
LINC00958-203ENST00000527945 HMOX1P09601 288 aa12.4□□□□□ -0.42
LINC00958-203ENST00000527945 SMARCC1Q92922 1105 aaPredicted RBP12.4□□□□□ -0.42
LINC00958-203ENST00000527945 CFAP53Q96M91 514 aa12.4□□□□□ -0.42
LINC00958-203ENST00000527945 PDGFDQ9GZP0 370 aaPredicted RBP12.4□□□□□ -0.42
LINC00958-203ENST00000527945 MTFR1LQ9H019 292 aa12.4□□□□□ -0.42
LINC00958-203ENST00000527945 PRKRIP1Q9H875 184 aaPredicted RBP12.4□□□□□ -0.42
LINC00958-203ENST00000527945 SIPA1L3O60292 1781 aaPredicted RBP12.39□□□□□ -0.43
LINC00958-203ENST00000527945 PHKG2P15735 406 aa12.39□□□□□ -0.43
LINC00958-203ENST00000527945 SLC16A10Q8TF71 515 aa12.39□□□□□ -0.43
LINC00958-203ENST00000527945 DCAF5Q96JK2 942 aa12.39□□□□□ -0.43
LINC00958-203ENST00000527945 MAP3K5Q99683 1374 aa12.39□□□□□ -0.43
LINC00958-203ENST00000527945 ERVV-2B6SEH9 535 aa12.38□□□□□ -0.43
LINC00958-203ENST00000527945 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
LINC00958-203ENST00000527945 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
LINC00958-203ENST00000527945 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
LINC00958-203ENST00000527945 RALBP1Q15311 655 aa12.37□□□□□ -0.43
LINC00958-203ENST00000527945 ZNF827Q17R98 1081 aa12.37□□□□□ -0.43
LINC00958-203ENST00000527945 CCDC184Q52MB2 194 aa12.37□□□□□ -0.43
LINC00958-203ENST00000527945 RSPH6AQ9H0K4 717 aa12.37□□□□□ -0.43
LINC00958-203ENST00000527945 C1orf141Q5JVX7 400 aa12.36□□□□□ -0.43
LINC00958-203ENST00000527945 NUDCQ9Y266 331 aa12.36□□□□□ -0.43
LINC00958-203ENST00000527945 TAF1LQ8IZX4 1826 aa12.36□□□□□ -0.43
LINC00958-203ENST00000527945 MRC1P22897 1456 aa12.35□□□□□ -0.43
LINC00958-203ENST00000527945 ZNF530Q6P9A1 599 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms