RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 CARD10Q9BWT7 1032 aa14.1□□□□□ -0.15
CAPN1-210ENST00000527699 LRRC4BQ9NT99 713 aa14.1□□□□□ -0.15
CAPN1-210ENST00000527699 WNK3Q9BYP7 1800 aa14.1□□□□□ -0.15
CAPN1-210ENST00000527699 AKT1S1Q96B36 256 aa14.09□□□□□ -0.15
CAPN1-210ENST00000527699 CARD11Q9BXL7 1154 aa14.09□□□□□ -0.15
CAPN1-210ENST00000527699 TTC21AQ8NDW8 1320 aa14.09□□□□□ -0.15
CAPN1-210ENST00000527699 NHSQ6T4R5 1651 aa14.08□□□□□ -0.16
CAPN1-210ENST00000527699 FSTL1Q12841 308 aa14.08□□□□□ -0.16
CAPN1-210ENST00000527699 LTV1Q96GA3 475 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-210ENST00000527699 CDCA7Q9BWT1 371 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-210ENST00000527699 SLC12A5Q9H2X9 1139 aa14.08□□□□□ -0.16
CAPN1-210ENST00000527699 TUBGCP6Q96RT7 1819 aa14.08□□□□□ -0.16
CAPN1-210ENST00000527699 CD2APQ9Y5K6 639 aa14.07□□□□□ -0.16
CAPN1-210ENST00000527699 BTAF1O14981 1849 aa14.06□□□□□ -0.16
CAPN1-210ENST00000527699 NFAT5O94916 1531 aa14.06□□□□□ -0.16
CAPN1-210ENST00000527699 ANKRD24Q8TF21 1146 aa14.06□□□□□ -0.16
CAPN1-210ENST00000527699 FBLN1P23142 703 aa14.05□□□□□ -0.16
CAPN1-210ENST00000527699 MLLT1Q03111 559 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-210ENST00000527699 HDGFL2Q7Z4V5 671 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-210ENST00000527699 IGSF1Q8N6C5 1336 aa14.05□□□□□ -0.16
CAPN1-210ENST00000527699 IL2RBP14784 551 aa14.03□□□□□ -0.16
CAPN1-210ENST00000527699 KCNQ4P56696 695 aa14.03□□□□□ -0.16
CAPN1-210ENST00000527699 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
CAPN1-210ENST00000527699 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
CAPN1-210ENST00000527699 CD163L1Q9NR16 1453 aa14.03□□□□□ -0.16
CAPN1-210ENST00000527699 SBNO2Q9Y2G9 1366 aa14.02□□□□□ -0.17
CAPN1-210ENST00000527699 ERBB3P21860 1342 aa14.02□□□□□ -0.17
CAPN1-210ENST00000527699 MON2Q7Z3U7 1717 aa14.01□□□□□ -0.17
CAPN1-210ENST00000527699 SLC27A3Q5K4L6 730 aa14.01□□□□□ -0.17
CAPN1-210ENST00000527699 USP31Q70CQ4 1352 aa14□□□□□ -0.17
CAPN1-210ENST00000527699 LTN1O94822 1766 aa13.99□□□□□ -0.17
CAPN1-210ENST00000527699 A0A1W2PP64 1363 aa13.99□□□□□ -0.17
CAPN1-210ENST00000527699 TONSLQ96HA7 1378 aa13.99□□□□□ -0.17
CAPN1-210ENST00000527699 COL23A1Q86Y22 540 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-210ENST00000527699 SYTL4Q96C24 671 aaPredicted RBP13.99□□□□□ -0.17
CAPN1-210ENST00000527699 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
CAPN1-210ENST00000527699 TERF2IPQ9NYB0 399 aa13.98□□□□□ -0.17
CAPN1-210ENST00000527699 ST20-MTHFSA0A0A6YYL1 179 aa13.97□□□□□ -0.17
CAPN1-210ENST00000527699 ABHD8Q96I13 439 aa13.97□□□□□ -0.17
CAPN1-210ENST00000527699 EDC4Q6P2E9 1401 aaKnown RBP13.97□□□□□ -0.17
CAPN1-210ENST00000527699 FOXN1O15353 648 aa13.96□□□□□ -0.17
CAPN1-210ENST00000527699 AMPHP49418 695 aa13.96□□□□□ -0.17
CAPN1-210ENST00000527699 ARHGAP27Q6ZUM4 889 aa13.96□□□□□ -0.17
CAPN1-210ENST00000527699 USHBP1Q8N6Y0 703 aa13.96□□□□□ -0.17
CAPN1-210ENST00000527699 CCDC85CA6NKD9 419 aa13.95□□□□□ -0.18
CAPN1-210ENST00000527699 IP6K1Q92551 441 aa13.95□□□□□ -0.18
CAPN1-210ENST00000527699 COG3Q96JB2 828 aa13.95□□□□□ -0.18
CAPN1-210ENST00000527699 RRAGCQ9HB90 399 aa13.95□□□□□ -0.18
CAPN1-210ENST00000527699 PRDM10Q9NQV6 1147 aa13.95□□□□□ -0.18
CAPN1-210ENST00000527699 KDM2BQ8NHM5 1336 aa13.94□□□□□ -0.18
CAPN1-210ENST00000527699 PRIM1P49642 420 aaKnown RBP13.94□□□□□ -0.18
CAPN1-210ENST00000527699 RRS1Q15050 365 aaKnown RBP13.94□□□□□ -0.18
CAPN1-210ENST00000527699 AIDAQ96BJ3 306 aa13.94□□□□□ -0.18
CAPN1-210ENST00000527699 ABCC6O95255 1503 aa13.94□□□□□ -0.18
CAPN1-210ENST00000527699 MAP3K19Q56UN5 1328 aa13.93□□□□□ -0.18
CAPN1-210ENST00000527699 HOXC9P31274 260 aa13.93□□□□□ -0.18
CAPN1-210ENST00000527699 BCS1LQ9Y276 419 aa13.93□□□□□ -0.18
CAPN1-210ENST00000527699 KCPQ6ZWJ8 1503 aa13.93□□□□□ -0.18
CAPN1-210ENST00000527699 CICQ96RK0 1608 aaPredicted RBP13.93□□□□□ -0.18
CAPN1-210ENST00000527699 TESK2Q96S53 571 aa13.92□□□□□ -0.18
CAPN1-210ENST00000527699 GGNBP2Q9H3C7 697 aa13.92□□□□□ -0.18
CAPN1-210ENST00000527699 CTCFP49711 727 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-210ENST00000527699 CFAP44Q96MT7 982 aa13.91□□□□□ -0.18
CAPN1-210ENST00000527699 MKRN1Q9UHC7 482 aaKnown RBP13.91□□□□□ -0.18
CAPN1-210ENST00000527699 CCNL1Q9UK58 526 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-210ENST00000527699 USP54Q70EL1 1684 aa13.91□□□□□ -0.18
CAPN1-210ENST00000527699 C9orf131Q5VYM1 1079 aa13.9□□□□□ -0.18
CAPN1-210ENST00000527699 ZCRB1Q8TBF4 217 aaKnown RBP13.9□□□□□ -0.18
CAPN1-210ENST00000527699 RGPD2P0DJD1 1756 aa13.9□□□□□ -0.18
CAPN1-210ENST00000527699 PLEKHG2Q9H7P9 1386 aa13.89□□□□□ -0.19
CAPN1-210ENST00000527699 NBPF6Q5VWK0 638 aa13.89□□□□□ -0.19
CAPN1-210ENST00000527699 NBPF4Q96M43 638 aa13.89□□□□□ -0.19
CAPN1-210ENST00000527699 MEGF6O75095 1541 aa13.88□□□□□ -0.19
CAPN1-210ENST00000527699 LBX1P52954 281 aa13.87□□□□□ -0.19
CAPN1-210ENST00000527699 TNRC6CQ9HCJ0 1690 aaKnown RBP13.87□□□□□ -0.19
CAPN1-210ENST00000527699 PDE4DIPQ5VU43 2346 aa13.87□□□□□ -0.19
CAPN1-210ENST00000527699 DOT1LQ8TEK3 1739 aa13.87□□□□□ -0.19
CAPN1-210ENST00000527699 FYB1O15117 783 aa13.86□□□□□ -0.19
CAPN1-210ENST00000527699 NSD2O96028 1365 aa13.85□□□□□ -0.19
CAPN1-210ENST00000527699 PKD1L3Q7Z443 1732 aa13.85□□□□□ -0.19
CAPN1-210ENST00000527699 C10orf71Q711Q0 1435 aa13.85□□□□□ -0.19
CAPN1-210ENST00000527699 HSP90AB2PQ58FF8 381 aa13.85□□□□□ -0.19
CAPN1-210ENST00000527699 SMIM5Q71RC9 77 aa13.85□□□□□ -0.19
CAPN1-210ENST00000527699 FLAD1Q8NFF5 587 aa13.85□□□□□ -0.19
CAPN1-210ENST00000527699 PUS7Q96PZ0 661 aaKnown RBP13.85□□□□□ -0.19
CAPN1-210ENST00000527699 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
CAPN1-210ENST00000527699 ANKRD36BQ8N2N9 1353 aa13.84□□□□□ -0.19
CAPN1-210ENST00000527699 PPM1GO15355 546 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-210ENST00000527699 FCHSD2O94868 740 aa13.84□□□□□ -0.19
CAPN1-210ENST00000527699 RGS19P49795 217 aa13.84□□□□□ -0.19
CAPN1-210ENST00000527699 TMF1P82094 1093 aa13.84□□□□□ -0.19
CAPN1-210ENST00000527699 RAPGEF4Q8WZA2 1011 aa13.84□□□□□ -0.19
CAPN1-210ENST00000527699 POLR3GLQ9BT43 218 aa13.84□□□□□ -0.19
CAPN1-210ENST00000527699 RNF181Q9P0P0 153 aa13.84□□□□□ -0.19
CAPN1-210ENST00000527699 LY75O60449 1722 aa13.84□□□□□ -0.19
CAPN1-210ENST00000527699 TATP17735 454 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-210ENST00000527699 N4BP2Q86UW6 1770 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-210ENST00000527699 MPRIPQ6WCQ1 1025 aa13.82□□□□□ -0.2
CAPN1-210ENST00000527699 EMILIN1Q9Y6C2 1016 aa13.82□□□□□ -0.2
CAPN1-210ENST00000527699 USP47Q96K76 1375 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 697.5 ms