RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 RNF217Q8TC41 542 aa9.07□□□□□ -0.96
SOX6-208ENST00000527619 KDM5AP29375 1690 aaKnown RBP9.06□□□□□ -0.96
SOX6-208ENST00000527619 SLC4A2P04920 1241 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 FKBP5Q13451 457 aaPredicted RBP9.06□□□□□ -0.96
SOX6-208ENST00000527619 RNF214Q8ND24 703 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.06□□□□□ -0.96
SOX6-208ENST00000527619 FEZ1Q99689 392 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 RABEP1Q15276 862 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 CHD1LQ86WJ1 897 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 ITPRIPQ8IWB1 547 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 OTUD6BQ8N6M0 293 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 ANKRD7Q92527 254 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 MYCBPQ99417 103 aaPredicted RBP9.06□□□□□ -0.96
SOX6-208ENST00000527619 LNPKQ9C0E8 428 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 TSPY26PQ9H489 355 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 SPTLC3Q9NUV7 552 aa9.06□□□□□ -0.96
SOX6-208ENST00000527619 RRP7AQ9Y3A4 280 aaKnown RBP9.06□□□□□ -0.96
SOX6-208ENST00000527619 CD109Q6YHK3 1445 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 GLI2P10070 1586 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 FAM177BA6PVY3 158 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 MBD3O95983 291 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 TSPY4P0CV99 314 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 TSPY10P0CW01 314 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 U2AF2P26368 475 aaKnown RBP eCLIP9.05□□□□□ -0.96
SOX6-208ENST00000527619 CASC1Q6TDU7 716 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 TBC1D9Q6ZT07 1266 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 TCP11L2Q8N4U5 519 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 TERF2IPQ9NYB0 399 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 CEP152O94986 1710 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 CT47B1P0C2W7 299 aaPredicted RBP9.05□□□□□ -0.96
SOX6-208ENST00000527619 ARID4AP29374 1257 aaPredicted RBP9.05□□□□□ -0.96
SOX6-208ENST00000527619 SSR1P43307 286 aaKnown RBP9.05□□□□□ -0.96
SOX6-208ENST00000527619 GABPB1Q06547 395 aaPredicted RBP9.05□□□□□ -0.96
SOX6-208ENST00000527619 CT47A1Q5JQC4 288 aaPredicted RBP9.05□□□□□ -0.96
SOX6-208ENST00000527619 OGFRQ9NZT2 677 aa9.05□□□□□ -0.96
SOX6-208ENST00000527619 CCDC66A2RUB6 948 aa9.04□□□□□ -0.96
SOX6-208ENST00000527619 MLECQ14165 292 aa9.04□□□□□ -0.96
SOX6-208ENST00000527619 DIAPH3Q9NSV4 1193 aa9.04□□□□□ -0.96
SOX6-208ENST00000527619 ATF5Q9Y2D1 282 aaPredicted RBP9.04□□□□□ -0.96
SOX6-208ENST00000527619 TSPOAP1O95153 1857 aa9.04□□□□□ -0.96
SOX6-208ENST00000527619 TRIM27P14373 513 aa9.04□□□□□ -0.96
SOX6-208ENST00000527619 PKP1Q13835 747 aa9.04□□□□□ -0.96
SOX6-208ENST00000527619 NBPF10Q6P3W6 841 aaKnown RBP9.04□□□□□ -0.96
SOX6-208ENST00000527619 TIGD1Q96MW7 591 aa9.04□□□□□ -0.96
SOX6-208ENST00000527619 ZBTB12Q9Y330 459 aaPredicted RBP9.04□□□□□ -0.96
SOX6-208ENST00000527619 REREQ9P2R6 1566 aa9.04□□□□□ -0.96
SOX6-208ENST00000527619 UNC13BO14795 1591 aa9.03□□□□□ -0.96
SOX6-208ENST00000527619 CCDC172P0C7W6 258 aa9.03□□□□□ -0.96
SOX6-208ENST00000527619 CHAF1AQ13111 956 aaPredicted RBP9.03□□□□□ -0.96
SOX6-208ENST00000527619 SMC4Q9NTJ3 1288 aa9.03□□□□□ -0.96
SOX6-208ENST00000527619 MADDQ8WXG6 1647 aa9.03□□□□□ -0.96
SOX6-208ENST00000527619 SCAF11Q99590 1463 aaKnown RBP9.03□□□□□ -0.96
SOX6-208ENST00000527619 ARHGEF5Q12774 1597 aa9.03□□□□□ -0.96
SOX6-208ENST00000527619 NBPF6Q5VWK0 638 aa9.03□□□□□ -0.96
SOX6-208ENST00000527619 NBPF5PQ86XG9 351 aaPredicted RBP9.03□□□□□ -0.96
SOX6-208ENST00000527619 NBPF4Q96M43 638 aa9.03□□□□□ -0.96
SOX6-208ENST00000527619 ZBTB40Q9NUA8 1239 aa9.03□□□□□ -0.96
SOX6-208ENST00000527619 NSFL1CQ9UNZ2 370 aaKnown RBP9.03□□□□□ -0.96
SOX6-208ENST00000527619 UVSSAQ2YD98 709 aa9.02□□□□□ -0.97
SOX6-208ENST00000527619 ATF7IPQ6VMQ6 1270 aa9.02□□□□□ -0.97
SOX6-208ENST00000527619 SIRT1Q96EB6 747 aa9.02□□□□□ -0.97
SOX6-208ENST00000527619 CTIFO43310 598 aaKnown RBP9.02□□□□□ -0.97
SOX6-208ENST00000527619 CDC45O75419 566 aa9.02□□□□□ -0.97
SOX6-208ENST00000527619 ZC3H15Q8WU90 426 aaKnown RBP9.02□□□□□ -0.97
SOX6-208ENST00000527619 SYAP1Q96A49 352 aaPredicted RBP9.02□□□□□ -0.97
SOX6-208ENST00000527619 ZDHHC9Q9Y397 364 aa9.02□□□□□ -0.97
SOX6-208ENST00000527619 CLTCL1P53675 1640 aa9.02□□□□□ -0.97
SOX6-208ENST00000527619 TULP2O00295 520 aa9.01□□□□□ -0.97
SOX6-208ENST00000527619 RIOK3O14730 519 aaKnown RBP9.01□□□□□ -0.97
SOX6-208ENST00000527619 C17orf53Q8N3J3 647 aaPredicted RBP9.01□□□□□ -0.97
SOX6-208ENST00000527619 FAM184AQ8NB25 1140 aa9.01□□□□□ -0.97
SOX6-208ENST00000527619 IRF5Q13568 498 aa9.01□□□□□ -0.97
SOX6-208ENST00000527619 TMEM57Q8N5G2 664 aa9.01□□□□□ -0.97
SOX6-208ENST00000527619 ZNF513Q8N8E2 541 aaPredicted RBP9.01□□□□□ -0.97
SOX6-208ENST00000527619 NCAPGQ9BPX3 1015 aa9.01□□□□□ -0.97
SOX6-208ENST00000527619 TTC12Q9H892 705 aaPredicted RBP9.01□□□□□ -0.97
SOX6-208ENST00000527619 ATP10AO60312 1499 aa9.01□□□□□ -0.97
SOX6-208ENST00000527619 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.01□□□□□ -0.97
SOX6-208ENST00000527619 TTC37Q6PGP7 1564 aa9.01□□□□□ -0.97
SOX6-208ENST00000527619 IQGAP3Q86VI3 1631 aa9.01□□□□□ -0.97
SOX6-208ENST00000527619 ABCA9Q8IUA7 1624 aa9□□□□□ -0.97
SOX6-208ENST00000527619 MAP3K4Q9Y6R4 1608 aa9□□□□□ -0.97
SOX6-208ENST00000527619 TNNT3P45378 269 aaPredicted RBP9□□□□□ -0.97
SOX6-208ENST00000527619 ANKRD45Q5TZF3 282 aa9□□□□□ -0.97
SOX6-208ENST00000527619 GCC1Q96CN9 775 aa9□□□□□ -0.97
SOX6-208ENST00000527619 RBM28Q9NW13 759 aaKnown RBP9□□□□□ -0.97
SOX6-208ENST00000527619 YEATS2Q9ULM3 1422 aa9□□□□□ -0.97
SOX6-208ENST00000527619 SLFN14P0C7P3 912 aa8.99□□□□□ -0.97
SOX6-208ENST00000527619 CAPN2P17655 700 aa8.99□□□□□ -0.97
SOX6-208ENST00000527619 SYCP1Q15431 976 aa8.99□□□□□ -0.97
SOX6-208ENST00000527619 ZGPATQ8N5A5 531 aaKnown RBP8.99□□□□□ -0.97
SOX6-208ENST00000527619 SSH1Q8WYL5 1049 aa8.99□□□□□ -0.97
SOX6-208ENST00000527619 NOB1Q9ULX3 412 aaKnown RBP8.99□□□□□ -0.97
SOX6-208ENST00000527619 ST18O60284 1047 aa8.99□□□□□ -0.97
SOX6-208ENST00000527619 ADCY5O95622 1261 aa8.99□□□□□ -0.97
SOX6-208ENST00000527619 GTF2A1P52655 376 aaPredicted RBP8.99□□□□□ -0.97
SOX6-208ENST00000527619 ZKSCAN8Q15776 578 aaPredicted RBP8.99□□□□□ -0.97
SOX6-208ENST00000527619 EFCAB2Q5VUJ9 269 aa8.99□□□□□ -0.97
SOX6-208ENST00000527619 ANKRD36BQ8N2N9 1353 aa8.99□□□□□ -0.97
SOX6-208ENST00000527619 SMARCA5O60264 1052 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms