RNA–Protein interactions for RNA: ENST00000526955.1

PKNOX2-202, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 1 (best)

Gene PKNOX2, Length 4,531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-202ENST00000526955 LETM1O95202 739 aaPredicted RBP12.44□□□□□ -0.42
PKNOX2-202ENST00000526955 NGLY1Q96IV0 654 aa12.44□□□□□ -0.42
PKNOX2-202ENST00000526955 NOS1P29475 1434 aa12.44□□□□□ -0.42
PKNOX2-202ENST00000526955 TRIM6-TRIM34B2RNG4 842 aa12.44□□□□□ -0.42
PKNOX2-202ENST00000526955 ZNF500O60304 480 aaPredicted RBP12.44□□□□□ -0.42
PKNOX2-202ENST00000526955 LRSAM1Q6UWE0 723 aa12.44□□□□□ -0.42
PKNOX2-202ENST00000526955 RBM42Q9BTD8 480 aaKnown RBP12.44□□□□□ -0.42
PKNOX2-202ENST00000526955 ATAD2Q6PL18 1390 aa12.44□□□□□ -0.42
PKNOX2-202ENST00000526955 ERBB4Q15303 1308 aa12.44□□□□□ -0.42
PKNOX2-202ENST00000526955 HTATSF1O43719 755 aaKnown RBP12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 TPM3P06753 285 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 TMEM132EQ6IEE7 984 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 C1orf115Q9H7X2 142 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 CABP2Q9NPB3 220 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 TRAPPC8Q9Y2L5 1435 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 CEP152O94986 1710 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 IQSEC2Q5JU85 1478 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 UBAP1LF5GYI3 381 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 CLEC17AQ6ZS10 378 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 ARID3AQ99856 593 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 ATP6V1DQ9Y5K8 247 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 ERC2O15083 957 aa12.43□□□□□ -0.42
PKNOX2-202ENST00000526955 PLCB2Q00722 1185 aa12.42□□□□□ -0.42
PKNOX2-202ENST00000526955 TET3O43151 1660 aa12.42□□□□□ -0.42
PKNOX2-202ENST00000526955 ELL2O00472 640 aaPredicted RBP12.42□□□□□ -0.42
PKNOX2-202ENST00000526955 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
PKNOX2-202ENST00000526955 RPAP2Q8IXW5 612 aaPredicted RBP12.42□□□□□ -0.42
PKNOX2-202ENST00000526955 DIAPH3Q9NSV4 1193 aa12.42□□□□□ -0.42
PKNOX2-202ENST00000526955 PRKAR2BP31323 418 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 DDIT3P35638 169 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 MAP3K4Q9Y6R4 1608 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 TWISTNBQ3B726 338 aaPredicted RBP12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 PPP6R1Q9UPN7 881 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 CLTCL1P53675 1640 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 SMAP1Q8IYB5 467 aaPredicted RBP12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 IFT57Q9NWB7 429 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 KIF3AQ9Y496 699 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 SYCE3A1L190 88 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 NFE2L2Q16236 605 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 TTC22Q5TAA0 569 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 FOXD4L5Q5VV16 416 aaPredicted RBP12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 RNF214Q8ND24 703 aa12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 FOXD4L4Q8WXT5 416 aaPredicted RBP12.41□□□□□ -0.42
PKNOX2-202ENST00000526955 PRIMPOLQ96LW4 560 aa12.4□□□□□ -0.42
PKNOX2-202ENST00000526955 AKAP17AQ02040 695 aaKnown RBP12.4□□□□□ -0.42
PKNOX2-202ENST00000526955 UVSSAQ2YD98 709 aa12.4□□□□□ -0.43
PKNOX2-202ENST00000526955 CHMP4CQ96CF2 233 aa12.4□□□□□ -0.43
PKNOX2-202ENST00000526955 MYOM1P52179 1685 aa12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 WDHD1O75717 1129 aaPredicted RBP12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 CNKSR2Q8WXI2 1034 aa12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 NEK4P51957 841 aa12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 DDX54Q8TDD1 881 aaKnown RBP12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 SYNE3Q6ZMZ3 975 aa12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 LMBRD1Q9NUN5 540 aa12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 TRIM35Q9UPQ4 493 aa12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 CD109Q6YHK3 1445 aa12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 REREQ9P2R6 1566 aa12.39□□□□□ -0.43
PKNOX2-202ENST00000526955 ABCC1P33527 1531 aa12.38□□□□□ -0.43
PKNOX2-202ENST00000526955 ZBTB7BO15156 539 aaPredicted RBP12.38□□□□□ -0.43
PKNOX2-202ENST00000526955 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
PKNOX2-202ENST00000526955 BRPF1P55201 1214 aaPredicted RBP12.38□□□□□ -0.43
PKNOX2-202ENST00000526955 RBSNQ9H1K0 784 aa12.38□□□□□ -0.43
PKNOX2-202ENST00000526955 CPLX2Q6PUV4 134 aaKnown RBP12.38□□□□□ -0.43
PKNOX2-202ENST00000526955 MRPL50Q8N5N7 158 aaKnown RBP12.38□□□□□ -0.43
PKNOX2-202ENST00000526955 KIF1BO60333 1816 aa12.38□□□□□ -0.43
PKNOX2-202ENST00000526955 WDR33Q9C0J8 1336 aaKnown RBP12.38□□□□□ -0.43
PKNOX2-202ENST00000526955 RIC3Q7Z5B4 369 aa12.38□□□□□ -0.43
PKNOX2-202ENST00000526955 PRM3Q9NNZ6 103 aa12.37□□□□□ -0.43
PKNOX2-202ENST00000526955 NEURL4Q96JN8 1562 aa12.37□□□□□ -0.43
PKNOX2-202ENST00000526955 ADAMTS2O95450 1211 aa12.37□□□□□ -0.43
PKNOX2-202ENST00000526955 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
PKNOX2-202ENST00000526955 ZFYVE9O95405 1425 aa12.36□□□□□ -0.43
PKNOX2-202ENST00000526955 USP26Q9BXU7 913 aa12.36□□□□□ -0.43
PKNOX2-202ENST00000526955 KIF24Q5T7B8 1368 aa12.36□□□□□ -0.43
PKNOX2-202ENST00000526955 FKBP5Q13451 457 aaPredicted RBP12.36□□□□□ -0.43
PKNOX2-202ENST00000526955 TSPYL4Q9UJ04 414 aa12.36□□□□□ -0.43
PKNOX2-202ENST00000526955 SPG7Q9UQ90 795 aa12.36□□□□□ -0.43
PKNOX2-202ENST00000526955 ABCA6Q8N139 1617 aa12.35□□□□□ -0.43
PKNOX2-202ENST00000526955 CCDC94Q9BW85 323 aaPredicted RBP12.35□□□□□ -0.43
PKNOX2-202ENST00000526955 RBM27Q9P2N5 1060 aaKnown RBP12.35□□□□□ -0.43
PKNOX2-202ENST00000526955 FAM177BA6PVY3 158 aa12.35□□□□□ -0.43
PKNOX2-202ENST00000526955 DCTPP1Q9H773 170 aa12.35□□□□□ -0.43
PKNOX2-202ENST00000526955 ATP7AQ04656 1500 aa12.35□□□□□ -0.43
PKNOX2-202ENST00000526955 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
PKNOX2-202ENST00000526955 PRAM1Q96QH2 718 aa12.35□□□□□ -0.43
PKNOX2-202ENST00000526955 SETBP1Q9Y6X0 1596 aa12.35□□□□□ -0.43
PKNOX2-202ENST00000526955 CFAP74Q9C0B2 1584 aa12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 APPP05067 770 aa12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 NOL8Q76FK4 1167 aaKnown RBP12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 BRD2P25440 801 aaKnown RBP12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 ANO2Q9NQ90 1003 aa12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 HMOX1P09601 288 aa12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 DRC7Q8IY82 874 aa12.34□□□□□ -0.43
PKNOX2-202ENST00000526955 VAMP4O75379 141 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms