RNA–Protein interactions for RNA: ENST00000526884.1

NFRKB-204, Transcript of nuclear factor related to kappaB binding protein, human

TSL 3

Gene NFRKB, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFRKB-204	ENST00000526884	PLSCR1	O15162	318 aa		32.5	■■■□□ 2.79
NFRKB-204	ENST00000526884	DOT1L	Q8TEK3	1739 aa		32.5	■■■□□ 2.79
NFRKB-204	ENST00000526884	TNNT2	P45379	298 aa	Predicted RBP	32.49	■■■□□ 2.79
NFRKB-204	ENST00000526884	PLEKHG2	Q9H7P9	1386 aa		32.48	■■■□□ 2.79
NFRKB-204	ENST00000526884	NPC1L1	Q9UHC9	1359 aa		32.48	■■■□□ 2.79
NFRKB-204	ENST00000526884	PER1	O15534	1290 aa	Predicted RBP	32.48	■■■□□ 2.79
NFRKB-204	ENST00000526884	ZCRB1	Q8TBF4	217 aa	Known RBP	32.48	■■■□□ 2.79
NFRKB-204	ENST00000526884	TAT	P17735	454 aa	Predicted RBP	32.46	■■■□□ 2.79
NFRKB-204	ENST00000526884	USHBP1	Q8N6Y0	703 aa		32.46	■■■□□ 2.79
NFRKB-204	ENST00000526884	DDX54	Q8TDD1	881 aa	Known RBP	32.42	■■■□□ 2.78
NFRKB-204	ENST00000526884	PCDH11X	Q9BZA7	1347 aa		32.41	■■■□□ 2.78
NFRKB-204	ENST00000526884	PCDH11Y	Q9BZA8	1340 aa		32.41	■■■□□ 2.78
NFRKB-204	ENST00000526884	EIF4A2	Q14240	407 aa	Known RBP	32.4	■■■□□ 2.78
NFRKB-204	ENST00000526884	EYA1	Q99502	592 aa		32.39	■■■□□ 2.78
NFRKB-204	ENST00000526884	PTF1A	Q7RTS3	328 aa		32.38	■■■□□ 2.77
NFRKB-204	ENST00000526884	LRP5	O75197	1615 aa		32.37	■■■□□ 2.77
NFRKB-204	ENST00000526884	KCNQ2	O43526	872 aa		32.36	■■■□□ 2.77
NFRKB-204	ENST00000526884	NBPF14	Q5TI25	921 aa		32.36	■■■□□ 2.77
NFRKB-204	ENST00000526884	ACSBG1	Q96GR2	724 aa		32.36	■■■□□ 2.77
NFRKB-204	ENST00000526884	IGSF1	Q8N6C5	1336 aa		32.35	■■■□□ 2.77
NFRKB-204	ENST00000526884	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.34	■■■□□ 2.77	2e-8	■■□□□ 12.8
NFRKB-204	ENST00000526884	LY75	O60449	1722 aa		32.33	■■■□□ 2.77
NFRKB-204	ENST00000526884	ITGB4	P16144	1822 aa		32.33	■■■□□ 2.77
NFRKB-204	ENST00000526884	CC2D1B	Q5T0F9	858 aa	Known RBP	32.31	■■■□□ 2.76
NFRKB-204	ENST00000526884	SPG7	Q9UQ90	795 aa		32.31	■■■□□ 2.76
NFRKB-204	ENST00000526884	TOGARAM1	Q9Y4F4	1720 aa		32.3	■■■□□ 2.76
NFRKB-204	ENST00000526884	PSD	A5PKW4	1024 aa	Predicted RBP	32.28	■■■□□ 2.76
NFRKB-204	ENST00000526884	R3HDM1	Q15032	1099 aa	Known RBP	32.28	■■■□□ 2.76
NFRKB-204	ENST00000526884	TXNRD1	Q16881	649 aa		32.28	■■■□□ 2.76
NFRKB-204	ENST00000526884	PAPPA	Q13219	1627 aa		32.27	■■■□□ 2.76
NFRKB-204	ENST00000526884	SRCAP	Q6ZRS2	3230 aa		32.26	■■■□□ 2.75
NFRKB-204	ENST00000526884	CYP27B1	O15528	508 aa		32.25	■■■□□ 2.75
NFRKB-204	ENST00000526884	PROM2	Q8N271	834 aa		32.25	■■■□□ 2.75
NFRKB-204	ENST00000526884	KDR	P35968	1356 aa		32.24	■■■□□ 2.75
NFRKB-204	ENST00000526884	MTHFS	P49914	203 aa		32.24	■■■□□ 2.75
NFRKB-204	ENST00000526884	PRIM1	P49642	420 aa	Known RBP	32.23	■■■□□ 2.75
NFRKB-204	ENST00000526884	SYTL4	Q96C24	671 aa	Predicted RBP	32.23	■■■□□ 2.75
NFRKB-204	ENST00000526884	NKX1-1	Q15270	411 aa	Predicted RBP	32.22	■■■□□ 2.75
NFRKB-204	ENST00000526884	IL13	P35225	146 aa		32.21	■■■□□ 2.75
NFRKB-204	ENST00000526884	CASZ1	Q86V15	1759 aa		32.21	■■■□□ 2.75
NFRKB-204	ENST00000526884	QSER1	Q2KHR3	1735 aa		32.2	■■■□□ 2.75
NFRKB-204	ENST00000526884	SLC27A3	Q5K4L6	730 aa		32.19	■■■□□ 2.74
NFRKB-204	ENST00000526884	IFNL2	Q8IZJ0	200 aa		32.18	■■■□□ 2.74
NFRKB-204	ENST00000526884	COL3A1	P02461	1466 aa	Predicted RBP	32.17	■■■□□ 2.74
NFRKB-204	ENST00000526884	AMOT	Q4VCS5	1084 aa		32.17	■■■□□ 2.74
NFRKB-204	ENST00000526884	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.16	■■■□□ 2.74
NFRKB-204	ENST00000526884	PHKG2	P15735	406 aa		32.15	■■■□□ 2.74
NFRKB-204	ENST00000526884	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.14	■■■□□ 2.74
NFRKB-204	ENST00000526884	STK32B	Q9NY57	414 aa		32.14	■■■□□ 2.74
NFRKB-204	ENST00000526884	DIAPH1	O60610	1272 aa	Known RBP	32.13	■■■□□ 2.73
NFRKB-204	ENST00000526884	HMGB2	P26583	209 aa	Known RBP	32.13	■■■□□ 2.73
NFRKB-204	ENST00000526884	VIRMA	Q69YN4	1812 aa	Known RBP	32.13	■■■□□ 2.73
NFRKB-204	ENST00000526884	TAF1L	Q8IZX4	1826 aa		32.13	■■■□□ 2.73
NFRKB-204	ENST00000526884	C5	P01031	1676 aa		32.12	■■■□□ 2.73
NFRKB-204	ENST00000526884	SULT6B1	Q6IMI4	303 aa		32.12	■■■□□ 2.73
NFRKB-204	ENST00000526884	HSP90AB1	P08238	724 aa	Known RBP	32.11	■■■□□ 2.73
NFRKB-204	ENST00000526884	SCN11A	Q9UI33	1791 aa		32.1	■■■□□ 2.73
NFRKB-204	ENST00000526884	ZEB1	P37275	1124 aa	Predicted RBP	32.1	■■■□□ 2.73
NFRKB-204	ENST00000526884	SLC15A2	Q16348	729 aa		32.1	■■■□□ 2.73
NFRKB-204	ENST00000526884	AEBP1	Q8IUX7	1158 aa		32.1	■■■□□ 2.73
NFRKB-204	ENST00000526884	TUBGCP6	Q96RT7	1819 aa		32.08	■■■□□ 2.73
NFRKB-204	ENST00000526884	MPRIP	Q6WCQ1	1025 aa		32.07	■■■□□ 2.72
NFRKB-204	ENST00000526884	SMARCC1	Q92922	1105 aa	Predicted RBP	32.07	■■■□□ 2.72
NFRKB-204	ENST00000526884	LRRC4B	Q9NT99	713 aa		32.07	■■■□□ 2.72
NFRKB-204	ENST00000526884	CNGB1	Q14028	1251 aa	Predicted RBP	32.06	■■■□□ 2.72
NFRKB-204	ENST00000526884	DCAF5	Q96JK2	942 aa		32.06	■■■□□ 2.72
NFRKB-204	ENST00000526884	CFAP53	Q96M91	514 aa		32.06	■■■□□ 2.72
NFRKB-204	ENST00000526884	PALLD	Q8WX93	1383 aa		32.06	■■■□□ 2.72
NFRKB-204	ENST00000526884	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.05	■■■□□ 2.72
NFRKB-204	ENST00000526884	TMOD3	Q9NYL9	352 aa		32.04	■■■□□ 2.72
NFRKB-204	ENST00000526884	ZNF831	Q5JPB2	1677 aa		32.03	■■■□□ 2.72
NFRKB-204	ENST00000526884	C1orf141	Q5JVX7	400 aa		32.03	■■■□□ 2.72
NFRKB-204	ENST00000526884	CCNL1	Q9UK58	526 aa	Predicted RBP	32.03	■■■□□ 2.72
NFRKB-204	ENST00000526884	ERVV-2	B6SEH9	535 aa		32.02	■■■□□ 2.72
NFRKB-204	ENST00000526884	PIGB	Q92521	554 aa		32.01	■■■□□ 2.71
NFRKB-204	ENST00000526884	KDM6A	O15550	1401 aa	Predicted RBP	32	■■■□□ 2.71
NFRKB-204	ENST00000526884	PPP2R1A	P30153	589 aa		32	■■■□□ 2.71
NFRKB-204	ENST00000526884	AKT1S1	Q96B36	256 aa		31.99	■■■□□ 2.71
NFRKB-204	ENST00000526884	SPON1	Q9HCB6	807 aa		31.99	■■■□□ 2.71
NFRKB-204	ENST00000526884	ADAMTS7	Q9UKP4	1686 aa		31.99	■■■□□ 2.71
NFRKB-204	ENST00000526884	HMOX1	P09601	288 aa		31.98	■■■□□ 2.71
NFRKB-204	ENST00000526884	ZNF827	Q17R98	1081 aa		31.97	■■■□□ 2.71
NFRKB-204	ENST00000526884	C4B	P0C0L5	1744 aa		31.96	■■■□□ 2.71
NFRKB-204	ENST00000526884	AKAP4	Q5JQC9	854 aa		31.95	■■■□□ 2.71
NFRKB-204	ENST00000526884	NUDC	Q9Y266	331 aa		31.95	■■■□□ 2.71
NFRKB-204	ENST00000526884	COL24A1	Q17RW2	1714 aa		31.95	■■■□□ 2.7
NFRKB-204	ENST00000526884	U2SURP	O15042	1029 aa	Known RBP	31.94	■■■□□ 2.7
NFRKB-204	ENST00000526884	MRC1	P22897	1456 aa		31.92	■■■□□ 2.7
NFRKB-204	ENST00000526884	UBR3	Q6ZT12	1888 aa		31.92	■■■□□ 2.7
NFRKB-204	ENST00000526884	CIC	Q96RK0	1608 aa	Predicted RBP	31.9	■■■□□ 2.7
NFRKB-204	ENST00000526884	KCNQ4	P56696	695 aa		31.9	■■■□□ 2.7
NFRKB-204	ENST00000526884	MTFR1L	Q9H019	292 aa		31.9	■■■□□ 2.7
NFRKB-204	ENST00000526884	CABP4	P57796	275 aa		31.89	■■■□□ 2.7
NFRKB-204	ENST00000526884	TFCP2L1	Q9NZI6	479 aa		31.89	■■■□□ 2.7
NFRKB-204	ENST00000526884	COL5A3	P25940	1745 aa	Predicted RBP	31.89	■■■□□ 2.69
NFRKB-204	ENST00000526884	LOC102724428	A0A0B4J2F2	783 aa		31.88	■■■□□ 2.69
NFRKB-204	ENST00000526884	SIK1	P57059	783 aa		31.88	■■■□□ 2.69
NFRKB-204	ENST00000526884	SLC16A10	Q8TF71	515 aa		31.88	■■■□□ 2.69
NFRKB-204	ENST00000526884	PDGFD	Q9GZP0	370 aa	Predicted RBP	31.88	■■■□□ 2.69
NFRKB-204	ENST00000526884	ASAP1	Q9ULH1	1129 aa		31.87	■■■□□ 2.69

Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms