RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TTC21BQ7Z4L5 1316 aa14.5□□□□□ -0.09
LINC01001-201ENST00000526704 K7ELQ4 463 aaPredicted RBP14.5□□□□□ -0.09
LINC01001-201ENST00000526704 PANK2Q9BZ23 570 aa14.5□□□□□ -0.09
LINC01001-201ENST00000526704 KIAA0232Q92628 1395 aa14.5□□□□□ -0.09
LINC01001-201ENST00000526704 TUBGCP6Q96RT7 1819 aa14.5□□□□□ -0.09
LINC01001-201ENST00000526704 RRAGDQ9NQL2 400 aaPredicted RBP14.49□□□□□ -0.09
LINC01001-201ENST00000526704 USP6P35125 1406 aa14.49□□□□□ -0.09
LINC01001-201ENST00000526704 TNRQ92752 1358 aa14.49□□□□□ -0.09
LINC01001-201ENST00000526704 TMEM2Q9UHN6 1383 aa14.49□□□□□ -0.09
LINC01001-201ENST00000526704 CHL1O00533 1208 aa14.49□□□□□ -0.09
LINC01001-201ENST00000526704 TTC22Q5TAA0 569 aa14.49□□□□□ -0.09
LINC01001-201ENST00000526704 ANKRD44Q8N8A2 993 aa14.49□□□□□ -0.09
LINC01001-201ENST00000526704 MCM10Q7L590 875 aa14.48□□□□□ -0.09
LINC01001-201ENST00000526704 RGPD8O14715 1765 aaPredicted RBP14.48□□□□□ -0.09
LINC01001-201ENST00000526704 CRB1P82279 1406 aa14.48□□□□□ -0.09
LINC01001-201ENST00000526704 RTL1A6NKG5 1358 aa14.48□□□□□ -0.09
LINC01001-201ENST00000526704 FAM208AQ9UK61 1670 aaKnown RBP14.48□□□□□ -0.09
LINC01001-201ENST00000526704 ACEP12821 1306 aa14.47□□□□□ -0.09
LINC01001-201ENST00000526704 CEP85Q6P2H3 762 aa14.47□□□□□ -0.09
LINC01001-201ENST00000526704 GBP4Q96PP9 640 aa14.47□□□□□ -0.09
LINC01001-201ENST00000526704 FOXD4L1Q9NU39 408 aa14.47□□□□□ -0.09
LINC01001-201ENST00000526704 C16orf71Q8IYS4 520 aaPredicted RBP14.47□□□□□ -0.09
LINC01001-201ENST00000526704 GAS2L2Q8NHY3 880 aa14.47□□□□□ -0.09
LINC01001-201ENST00000526704 USP31Q70CQ4 1352 aa14.47□□□□□ -0.09
LINC01001-201ENST00000526704 LRRC37A3O60309 1634 aa14.46□□□□□ -0.09
LINC01001-201ENST00000526704 OTUD7AQ8TE49 926 aaPredicted RBP14.46□□□□□ -0.09
LINC01001-201ENST00000526704 N4BP2Q86UW6 1770 aaPredicted RBP14.46□□□□□ -0.09
LINC01001-201ENST00000526704 PTPRCP08575 1304 aa14.46□□□□□ -0.09
LINC01001-201ENST00000526704 MRE11P49959 708 aa14.46□□□□□ -0.09
LINC01001-201ENST00000526704 HDGFP51858 240 aaKnown RBP14.46□□□□□ -0.09
LINC01001-201ENST00000526704 HSP90AA1P07900 732 aaKnown RBP14.45□□□□□ -0.1
LINC01001-201ENST00000526704 HAP1P54257 671 aaPredicted RBP14.45□□□□□ -0.1
LINC01001-201ENST00000526704 HSP90AB2PQ58FF8 381 aa14.45□□□□□ -0.1
LINC01001-201ENST00000526704 RPAP2Q8IXW5 612 aaPredicted RBP14.45□□□□□ -0.1
LINC01001-201ENST00000526704 SSH2Q76I76 1423 aa14.45□□□□□ -0.1
LINC01001-201ENST00000526704 ARHGEF10O15013 1369 aa14.45□□□□□ -0.1
LINC01001-201ENST00000526704 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
LINC01001-201ENST00000526704 MEIS3Q99687 375 aa14.44□□□□□ -0.1
LINC01001-201ENST00000526704 ESF1Q9H501 851 aaKnown RBP14.44□□□□□ -0.1
LINC01001-201ENST00000526704 GRPEL1Q9HAV7 217 aa14.44□□□□□ -0.1
LINC01001-201ENST00000526704 XRN1Q8IZH2 1706 aaKnown RBP14.44□□□□□ -0.1
LINC01001-201ENST00000526704 PIK3C2AO00443 1686 aa14.44□□□□□ -0.1
LINC01001-201ENST00000526704 CACNA1FO60840 1977 aa14.44□□□□□ -0.1
LINC01001-201ENST00000526704 EIF5BO60841 1220 aaKnown RBP14.43□□□□□ -0.1
LINC01001-201ENST00000526704 SSFA2P28290 1259 aa14.43□□□□□ -0.1
LINC01001-201ENST00000526704 RABEP1Q15276 862 aa14.43□□□□□ -0.1
LINC01001-201ENST00000526704 ISY1Q9ULR0 285 aaKnown RBP14.43□□□□□ -0.1
LINC01001-201ENST00000526704 PLEKHG1Q9ULL1 1385 aa14.43□□□□□ -0.1
LINC01001-201ENST00000526704 MARF1Q9Y4F3 1742 aaKnown RBP14.43□□□□□ -0.1
LINC01001-201ENST00000526704 PTPRUQ92729 1446 aa14.43□□□□□ -0.1
LINC01001-201ENST00000526704 SMARCA5O60264 1052 aaPredicted RBP14.43□□□□□ -0.1
LINC01001-201ENST00000526704 USP26Q9BXU7 913 aa14.43□□□□□ -0.1
LINC01001-201ENST00000526704 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
LINC01001-201ENST00000526704 MAP3K19Q56UN5 1328 aa14.42□□□□□ -0.1
LINC01001-201ENST00000526704 CEP170BQ9Y4F5 1589 aaPredicted RBP14.42□□□□□ -0.1
LINC01001-201ENST00000526704 PTMSP20962 102 aa14.42□□□□□ -0.1
LINC01001-201ENST00000526704 SDSP20132 328 aa14.41□□□□□ -0.1
LINC01001-201ENST00000526704 SKOR2Q2VWA4 1001 aaPredicted RBP14.41□□□□□ -0.1
LINC01001-201ENST00000526704 CLEC17AQ6ZS10 378 aa14.41□□□□□ -0.1
LINC01001-201ENST00000526704 FOXO3O43524 673 aa14.4□□□□□ -0.1
LINC01001-201ENST00000526704 GAS2L3Q86XJ1 694 aa14.4□□□□□ -0.1
LINC01001-201ENST00000526704 MIS18AQ9NYP9 233 aa14.4□□□□□ -0.1
LINC01001-201ENST00000526704 KDRP35968 1356 aa14.4□□□□□ -0.1
LINC01001-201ENST00000526704 DIP2AQ14689 1571 aa14.4□□□□□ -0.1
LINC01001-201ENST00000526704 APBB1O00213 710 aa14.4□□□□□ -0.1
LINC01001-201ENST00000526704 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
LINC01001-201ENST00000526704 SOX12O15370 315 aa14.39□□□□□ -0.11
LINC01001-201ENST00000526704 LTKP29376 864 aa14.39□□□□□ -0.11
LINC01001-201ENST00000526704 G2E3Q7L622 706 aa14.39□□□□□ -0.11
LINC01001-201ENST00000526704 SBNO1A3KN83 1393 aa14.39□□□□□ -0.11
LINC01001-201ENST00000526704 FLT4P35916 1363 aa14.39□□□□□ -0.11
LINC01001-201ENST00000526704 MTHFSDQ2M296 383 aaKnown RBP14.39□□□□□ -0.11
LINC01001-201ENST00000526704 BAG4O95429 457 aaKnown RBP14.38□□□□□ -0.11
LINC01001-201ENST00000526704 TSPYL4Q9UJ04 414 aa14.38□□□□□ -0.11
LINC01001-201ENST00000526704 USP54Q70EL1 1684 aa14.38□□□□□ -0.11
LINC01001-201ENST00000526704 TTC21AQ8NDW8 1320 aa14.37□□□□□ -0.11
LINC01001-201ENST00000526704 F6X3S4 739 aa14.37□□□□□ -0.11
LINC01001-201ENST00000526704 CYP2E1P05181 493 aaPredicted RBP14.36□□□□□ -0.11
LINC01001-201ENST00000526704 CASC1Q6TDU7 716 aa14.36□□□□□ -0.11
LINC01001-201ENST00000526704 IGSF1Q8N6C5 1336 aa14.36□□□□□ -0.11
LINC01001-201ENST00000526704 HMMRO75330 724 aa14.36□□□□□ -0.11
LINC01001-201ENST00000526704 CCT4P50991 539 aaKnown RBP14.36□□□□□ -0.11
LINC01001-201ENST00000526704 NWD1Q149M9 1564 aa14.36□□□□□ -0.11
LINC01001-201ENST00000526704 CLCN1P35523 988 aa14.35□□□□□ -0.11
LINC01001-201ENST00000526704 SLC4A10Q6U841 1118 aa14.35□□□□□ -0.11
LINC01001-201ENST00000526704 RTF1Q92541 710 aaKnown RBP14.35□□□□□ -0.11
LINC01001-201ENST00000526704 OSBPL3Q9H4L5 887 aa14.35□□□□□ -0.11
LINC01001-201ENST00000526704 GOLGA6L22H0YM25 854 aa14.35□□□□□ -0.11
LINC01001-201ENST00000526704 KLHL40Q2TBA0 621 aa14.34□□□□□ -0.11
LINC01001-201ENST00000526704 SLIT1O75093 1534 aa14.34□□□□□ -0.11
LINC01001-201ENST00000526704 IBTKQ9P2D0 1353 aaPredicted RBP14.34□□□□□ -0.11
LINC01001-201ENST00000526704 REC8O95072 547 aa14.34□□□□□ -0.11
LINC01001-201ENST00000526704 PDE1AP54750 535 aa14.34□□□□□ -0.11
LINC01001-201ENST00000526704 SLC26A8Q96RN1 970 aa14.34□□□□□ -0.11
LINC01001-201ENST00000526704 EYA1Q99502 592 aa14.34□□□□□ -0.11
LINC01001-201ENST00000526704 SALL3Q9BXA9 1300 aa14.34□□□□□ -0.11
LINC01001-201ENST00000526704 ERC2O15083 957 aa14.33□□□□□ -0.11
LINC01001-201ENST00000526704 NUCB2P80303 420 aa14.33□□□□□ -0.11
LINC01001-201ENST00000526704 PKP1Q13835 747 aa14.33□□□□□ -0.11
LINC01001-201ENST00000526704 ARHGAP23Q9P227 1491 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms