RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 TRAK1Q9UPV9 953 aa15.19■□□□□ 0.02
KDM2A-207ENST00000526258 HCLS1P14317 486 aaPredicted RBP15.19■□□□□ 0.02
KDM2A-207ENST00000526258 BRD2P25440 801 aaKnown RBP15.19■□□□□ 0.02
KDM2A-207ENST00000526258 GNAI1P63096 354 aa15.19■□□□□ 0.02
KDM2A-207ENST00000526258 NEUROD6Q96NK8 337 aa15.18■□□□□ 0.02
KDM2A-207ENST00000526258 TOP1P11387 765 aaKnown RBP15.18■□□□□ 0.02
KDM2A-207ENST00000526258 ZSCAN31Q96LW9 406 aaPredicted RBP15.18■□□□□ 0.02
KDM2A-207ENST00000526258 TANGO6Q9C0B7 1094 aa15.18■□□□□ 0.02
KDM2A-207ENST00000526258 RAI14Q9P0K7 980 aa15.18■□□□□ 0.02
KDM2A-207ENST00000526258 GOLGA6L9A6NEM1 432 aa15.18■□□□□ 0.02
KDM2A-207ENST00000526258 RSRC1Q96IZ7 334 aaKnown RBP15.18■□□□□ 0.02
KDM2A-207ENST00000526258 CDK5RAP3Q96JB5 506 aa15.18■□□□□ 0.02
KDM2A-207ENST00000526258 MYRIPQ8NFW9 859 aa15.17■□□□□ 0.02
KDM2A-207ENST00000526258 MAP2K2P36507 400 aa15.17■□□□□ 0.02
KDM2A-207ENST00000526258 STK3Q13188 491 aa15.17■□□□□ 0.02
KDM2A-207ENST00000526258 OTUD6BQ8N6M0 293 aa15.17■□□□□ 0.02
KDM2A-207ENST00000526258 CEP63Q96MT8 703 aa15.17■□□□□ 0.02
KDM2A-207ENST00000526258 TAF4BQ92750 862 aa15.17■□□□□ 0.02
KDM2A-207ENST00000526258 DMTNQ08495 405 aa15.17■□□□□ 0.02
KDM2A-207ENST00000526258 SRRTQ9BXP5 876 aaKnown RBP15.17■□□□□ 0.02
KDM2A-207ENST00000526258 SMC1AQ14683 1233 aaKnown RBP15.16■□□□□ 0.02
KDM2A-207ENST00000526258 SPECC1LQ69YQ0 1117 aa15.16■□□□□ 0.02
KDM2A-207ENST00000526258 CKAP2LQ8IYA6 745 aa15.16■□□□□ 0.02
KDM2A-207ENST00000526258 TCP11L2Q8N4U5 519 aa15.16■□□□□ 0.02
KDM2A-207ENST00000526258 GTF3C6Q969F1 213 aa15.16■□□□□ 0.02
KDM2A-207ENST00000526258 MPHOSPH10O00566 681 aaKnown RBP15.16■□□□□ 0.02
KDM2A-207ENST00000526258 STIM1Q13586 685 aa15.16■□□□□ 0.02
KDM2A-207ENST00000526258 C1orf141Q5JVX7 400 aa15.16■□□□□ 0.02
KDM2A-207ENST00000526258 NUTM2DQ5VT03 806 aaPredicted RBP15.16■□□□□ 0.02
KDM2A-207ENST00000526258 VPS37DQ86XT2 251 aa15.16■□□□□ 0.02
KDM2A-207ENST00000526258 MTMR7Q9Y216 660 aa15.16■□□□□ 0.02
KDM2A-207ENST00000526258 ATP2C2O75185 946 aa15.16■□□□□ 0.02
KDM2A-207ENST00000526258 SCAND2PQ9GZW5 306 aaPredicted RBP15.16■□□□□ 0.02
KDM2A-207ENST00000526258 ZSWIM4Q9H7M6 989 aa15.16■□□□□ 0.02
KDM2A-207ENST00000526258 UTP14CQ5TAP6 766 aaKnown RBP15.15■□□□□ 0.02
KDM2A-207ENST00000526258 PPM1EQ8WY54 764 aa15.15■□□□□ 0.02
KDM2A-207ENST00000526258 VPS18Q9P253 973 aa15.15■□□□□ 0.02
KDM2A-207ENST00000526258 DIAPH1O60610 1272 aaKnown RBP15.15■□□□□ 0.02
KDM2A-207ENST00000526258 IMMTQ16891 758 aaKnown RBP15.15■□□□□ 0.02
KDM2A-207ENST00000526258 CCDC186Q7Z3E2 898 aa15.15■□□□□ 0.02
KDM2A-207ENST00000526258 NBPF11Q86T75 865 aa15.15■□□□□ 0.02
KDM2A-207ENST00000526258 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.15■□□□□ 0.02
KDM2A-207ENST00000526258 DDX58O95786 925 aaKnown RBP15.15■□□□□ 0.02
KDM2A-207ENST00000526258 GIGYF2Q6Y7W6 1299 aaKnown RBP15.15■□□□□ 0.02
KDM2A-207ENST00000526258 EXOSC9Q06265 439 aaKnown RBP15.15■□□□□ 0.02
KDM2A-207ENST00000526258 C20orf194Q5TEA3 1177 aa15.15■□□□□ 0.02
KDM2A-207ENST00000526258 NUTM2FA1L443 756 aa15.15■□□□□ 0.02
KDM2A-207ENST00000526258 KRT18P05783 430 aaKnown RBP15.15■□□□□ 0.02
KDM2A-207ENST00000526258 PRIM1P49642 420 aaKnown RBP15.15■□□□□ 0.02
KDM2A-207ENST00000526258 GNG11P61952 73 aa15.15■□□□□ 0.02
KDM2A-207ENST00000526258 ERC1Q8IUD2 1116 aa15.15■□□□□ 0.02
KDM2A-207ENST00000526258 CCDC83Q8IWF9 413 aa15.15■□□□□ 0.02
KDM2A-207ENST00000526258 NOB1Q9ULX3 412 aaKnown RBP15.15■□□□□ 0.02
KDM2A-207ENST00000526258 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 GDPD2Q9HCC8 539 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 SETSIPP0DME0 302 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 NUP133Q8WUM0 1156 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 BCCIPQ9P287 314 aaKnown RBP eCLIP15.14■□□□□ 0.01
KDM2A-207ENST00000526258 UBTFL1P0CB47 393 aaPredicted RBP15.14■□□□□ 0.01
KDM2A-207ENST00000526258 ZNF165P49910 485 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
KDM2A-207ENST00000526258 TMC6Q7Z403 805 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 FERMT3Q86UX7 667 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 UACAQ9BZF9 1416 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 FYB1O15117 783 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 LIG1P18858 919 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 MSL1Q68DK7 614 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 SPATA24Q86W54 205 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 CERS3Q8IU89 383 aa15.14■□□□□ 0.01
KDM2A-207ENST00000526258 SKILP12757 684 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 IFFO1Q0D2I5 559 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 SART3Q15020 963 aaKnown RBP15.13■□□□□ 0.01
KDM2A-207ENST00000526258 PAF1Q8N7H5 531 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 COG3Q96JB2 828 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 SCLT1Q96NL6 688 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 DDX19AQ9NUU7 478 aaKnown RBP15.13■□□□□ 0.01
KDM2A-207ENST00000526258 LRCH2Q5VUJ6 765 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 CCDC150Q8NCX0 1101 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 PDRG1Q9NUG6 133 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 HIP1O00291 1037 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 GOLIM4O00461 696 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 WDR66Q8TBY9 1149 aa15.13■□□□□ 0.01
KDM2A-207ENST00000526258 CCDC12Q8WUD4 166 aaPredicted RBP15.12■□□□□ 0.01
KDM2A-207ENST00000526258 ATF7IPQ6VMQ6 1270 aa15.12■□□□□ 0.01
KDM2A-207ENST00000526258 DNAI1Q9UI46 699 aa15.12■□□□□ 0.01
KDM2A-207ENST00000526258 PLEKHH1Q9ULM0 1364 aa15.12■□□□□ 0.01
KDM2A-207ENST00000526258 CTAGE5O15320 804 aa15.12■□□□□ 0.01
KDM2A-207ENST00000526258 KRI1Q8N9T8 703 aaKnown RBP15.12■□□□□ 0.01
KDM2A-207ENST00000526258 CCDC144AA2RUR9 1427 aa15.12■□□□□ 0.01
KDM2A-207ENST00000526258 SURF6O75683 361 aaKnown RBP15.12■□□□□ 0.01
KDM2A-207ENST00000526258 ATP6V1AP38606 617 aa15.12■□□□□ 0.01
KDM2A-207ENST00000526258 CLNS1AP54105 237 aaKnown RBP15.12■□□□□ 0.01
KDM2A-207ENST00000526258 EIF5P55010 431 aaKnown RBP15.12■□□□□ 0.01
KDM2A-207ENST00000526258 ZNF622Q969S3 477 aaKnown RBP eCLIP15.12■□□□□ 0.012e-6■□□□□ 8.5
KDM2A-207ENST00000526258 SEPT11Q9NVA2 429 aaKnown RBP15.12■□□□□ 0.01
KDM2A-207ENST00000526258 CAVIN2O95810 425 aa15.11■□□□□ 0.01
KDM2A-207ENST00000526258 PPP2R1AP30153 589 aa15.11■□□□□ 0.01
KDM2A-207ENST00000526258 TUBB4AP04350 444 aa15.11■□□□□ 0.01
KDM2A-207ENST00000526258 TTC5Q8N0Z6 440 aa15.11■□□□□ 0.01
KDM2A-207ENST00000526258 PAFAH1B1P43034 410 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms