RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 PPP2R1AP30153 589 aa23.32■■□□□ 1.32
LMX1B-203ENST00000526117 FAM182BQ5T319 152 aa23.32■■□□□ 1.32
LMX1B-203ENST00000526117 ZCRB1Q8TBF4 217 aaKnown RBP23.32■■□□□ 1.32
LMX1B-203ENST00000526117 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.32■■□□□ 1.32
LMX1B-203ENST00000526117 RALBP1Q15311 655 aa23.3■■□□□ 1.32
LMX1B-203ENST00000526117 DIAPH1O60610 1272 aaKnown RBP23.29■■□□□ 1.32
LMX1B-203ENST00000526117 NHSQ6T4R5 1651 aa23.28■■□□□ 1.32
LMX1B-203ENST00000526117 PCDH11XQ9BZA7 1347 aa23.28■■□□□ 1.32
LMX1B-203ENST00000526117 PCDH11YQ9BZA8 1340 aa23.28■■□□□ 1.32
LMX1B-203ENST00000526117 SF3B2Q13435 895 aaKnown RBP23.27■■□□□ 1.32
LMX1B-203ENST00000526117 CFAP53Q96M91 514 aa23.27■■□□□ 1.32
LMX1B-203ENST00000526117 RGPD3A6NKT7 1758 aaPredicted RBP23.26■■□□□ 1.31
LMX1B-203ENST00000526117 RGPD4Q7Z3J3 1758 aa23.26■■□□□ 1.31
LMX1B-203ENST00000526117 CNGB1Q14028 1251 aaPredicted RBP23.25■■□□□ 1.31
LMX1B-203ENST00000526117 TRIM37O94972 964 aa23.24■■□□□ 1.31
LMX1B-203ENST00000526117 BCL11BQ9C0K0 894 aaPredicted RBP23.24■■□□□ 1.31
LMX1B-203ENST00000526117 SPG7Q9UQ90 795 aa23.24■■□□□ 1.31
LMX1B-203ENST00000526117 BAG6P46379 1132 aa23.22■■□□□ 1.31
LMX1B-203ENST00000526117 NKX1-1Q15270 411 aaPredicted RBP23.21■■□□□ 1.31
LMX1B-203ENST00000526117 AMOTQ4VCS5 1084 aa23.21■■□□□ 1.31
LMX1B-203ENST00000526117 SULT6B1Q6IMI4 303 aa23.21■■□□□ 1.31
LMX1B-203ENST00000526117 DDX54Q8TDD1 881 aaKnown RBP23.21■■□□□ 1.31
LMX1B-203ENST00000526117 CYP27B1O15528 508 aa23.2■■□□□ 1.3
LMX1B-203ENST00000526117 AEBP1Q8IUX7 1158 aa23.2■■□□□ 1.3
LMX1B-203ENST00000526117 DOT1LQ8TEK3 1739 aa23.19■■□□□ 1.3
LMX1B-203ENST00000526117 MYBBP1AQ9BQG0 1328 aaKnown RBP23.19■■□□□ 1.3
LMX1B-203ENST00000526117 PRKRIP1Q9H875 184 aaPredicted RBP23.18■■□□□ 1.3
LMX1B-203ENST00000526117 NUDCQ9Y266 331 aa23.18■■□□□ 1.3
LMX1B-203ENST00000526117 PLSCR1O15162 318 aa23.17■■□□□ 1.3
LMX1B-203ENST00000526117 PLEKHO1Q53GL0 409 aaPredicted RBP23.17■■□□□ 1.3
LMX1B-203ENST00000526117 RREB1Q92766 1687 aa23.16■■□□□ 1.3
LMX1B-203ENST00000526117 APBA3O96018 575 aa23.16■■□□□ 1.3
LMX1B-203ENST00000526117 DEFB132Q7Z7B7 95 aa23.16■■□□□ 1.3
LMX1B-203ENST00000526117 IFNL2Q8IZJ0 200 aa23.16■■□□□ 1.3
LMX1B-203ENST00000526117 PHKG2P15735 406 aa23.15■■□□□ 1.3
LMX1B-203ENST00000526117 CAMKK2Q96RR4 588 aa23.15■■□□□ 1.3
LMX1B-203ENST00000526117 TOGARAM1Q9Y4F4 1720 aa23.14■■□□□ 1.3
LMX1B-203ENST00000526117 BTAF1O14981 1849 aa23.14■■□□□ 1.29
LMX1B-203ENST00000526117 KCNQ2O43526 872 aa23.13■■□□□ 1.29
LMX1B-203ENST00000526117 U2SURPO15042 1029 aaKnown RBP23.12■■□□□ 1.29
LMX1B-203ENST00000526117 HSP90AB1P08238 724 aaKnown RBP23.12■■□□□ 1.29
LMX1B-203ENST00000526117 HMOX1P09601 288 aa23.12■■□□□ 1.29
LMX1B-203ENST00000526117 PTF1AQ7RTS3 328 aa23.12■■□□□ 1.29
LMX1B-203ENST00000526117 EN1Q05925 392 aaPredicted RBP23.11■■□□□ 1.29
LMX1B-203ENST00000526117 ACSBG1Q96GR2 724 aa23.11■■□□□ 1.29
LMX1B-203ENST00000526117 RSPH6AQ9H0K4 717 aa23.11■■□□□ 1.29
LMX1B-203ENST00000526117 FCHSD2O94868 740 aa23.1■■□□□ 1.29
LMX1B-203ENST00000526117 PRIM1P49642 420 aaKnown RBP23.09■■□□□ 1.29
LMX1B-203ENST00000526117 ZNF530Q6P9A1 599 aaPredicted RBP23.09■■□□□ 1.29
LMX1B-203ENST00000526117 DCAF5Q96JK2 942 aa23.09■■□□□ 1.29
LMX1B-203ENST00000526117 ADAMTS7Q9UKP4 1686 aa23.09■■□□□ 1.29
LMX1B-203ENST00000526117 NUP188Q5SRE5 1749 aa23.08■■□□□ 1.28
LMX1B-203ENST00000526117 EZH2Q15910 746 aaKnown RBP23.07■■□□□ 1.28
LMX1B-203ENST00000526117 AKAP4Q5JQC9 854 aa23.07■■□□□ 1.28
LMX1B-203ENST00000526117 ITGB4P16144 1822 aa23.07■■□□□ 1.28
LMX1B-203ENST00000526117 KDM6AO15550 1401 aaPredicted RBP23.07■■□□□ 1.28
LMX1B-203ENST00000526117 ERVV-2B6SEH9 535 aa23.06■■□□□ 1.28
LMX1B-203ENST00000526117 U2AF1L5P0DN76 240 aaPredicted RBP23.06■■□□□ 1.28
LMX1B-203ENST00000526117 U2AF1Q01081 240 aaKnown RBP eCLIP23.06■■□□□ 1.28
LMX1B-203ENST00000526117 C1orf141Q5JVX7 400 aa23.06■■□□□ 1.28
LMX1B-203ENST00000526117 LY75O60449 1722 aa23.05■■□□□ 1.28
LMX1B-203ENST00000526117 SCN11AQ9UI33 1791 aa23.04■■□□□ 1.28
LMX1B-203ENST00000526117 PRKAR2BP31323 418 aa23.03■■□□□ 1.28
LMX1B-203ENST00000526117 MTHFSDQ2M296 383 aaKnown RBP23.03■■□□□ 1.28
LMX1B-203ENST00000526117 GAS2L2Q8NHY3 880 aa23.03■■□□□ 1.28
LMX1B-203ENST00000526117 MRC1P22897 1456 aa23.03■■□□□ 1.28
LMX1B-203ENST00000526117 PROM2Q8N271 834 aa23.02■■□□□ 1.28
LMX1B-203ENST00000526117 SYTL4Q96C24 671 aaPredicted RBP23.02■■□□□ 1.28
LMX1B-203ENST00000526117 PNNQ9H307 717 aaKnown RBP23.01■■□□□ 1.27
LMX1B-203ENST00000526117 TXNRD1Q16881 649 aa23■■□□□ 1.27
LMX1B-203ENST00000526117 SLC27A3Q5K4L6 730 aa23■■□□□ 1.27
LMX1B-203ENST00000526117 PAPPAQ13219 1627 aa23■■□□□ 1.27
LMX1B-203ENST00000526117 ANP32CO43423 234 aa22.99■■□□□ 1.27
LMX1B-203ENST00000526117 PIGBQ92521 554 aa22.99■■□□□ 1.27
LMX1B-203ENST00000526117 TMOD3Q9NYL9 352 aa22.99■■□□□ 1.27
LMX1B-203ENST00000526117 MAP3K5Q99683 1374 aa22.99■■□□□ 1.27
LMX1B-203ENST00000526117 KAT6BQ8WYB5 2073 aa22.98■■□□□ 1.27
LMX1B-203ENST00000526117 MPRIPQ6WCQ1 1025 aa22.98■■□□□ 1.27
LMX1B-203ENST00000526117 SMARCC1Q92922 1105 aaPredicted RBP22.98■■□□□ 1.27
LMX1B-203ENST00000526117 PHACTR3Q96KR7 559 aa22.98■■□□□ 1.27
LMX1B-203ENST00000526117 PLEKHF1Q96S99 279 aa22.98■■□□□ 1.27
LMX1B-203ENST00000526117 HMGB2P26583 209 aaKnown RBP22.97■■□□□ 1.27
LMX1B-203ENST00000526117 ZNF831Q5JPB2 1677 aa22.97■■□□□ 1.27
LMX1B-203ENST00000526117 VIRMAQ69YN4 1812 aaKnown RBP22.96■■□□□ 1.27
LMX1B-203ENST00000526117 GNAT3A8MTJ3 354 aa22.95■■□□□ 1.26
LMX1B-203ENST00000526117 RNMTO43148 476 aaKnown RBP22.95■■□□□ 1.26
LMX1B-203ENST00000526117 PALLDQ8WX93 1383 aa22.95■■□□□ 1.26
LMX1B-203ENST00000526117 CEMIPQ8WUJ3 1361 aa22.94■■□□□ 1.26
LMX1B-203ENST00000526117 NBPF14Q5TI25 921 aa22.94■■□□□ 1.26
LMX1B-203ENST00000526117 HTATSF1O43719 755 aaKnown RBP22.93■■□□□ 1.26
LMX1B-203ENST00000526117 NEFMP07197 916 aa22.93■■□□□ 1.26
LMX1B-203ENST00000526117 CABP4P57796 275 aa22.93■■□□□ 1.26
LMX1B-203ENST00000526117 SLC52A2Q9HAB3 445 aa22.93■■□□□ 1.26
LMX1B-203ENST00000526117 CICQ96RK0 1608 aaPredicted RBP22.92■■□□□ 1.26
LMX1B-203ENST00000526117 WDR43Q15061 677 aaKnown RBP eCLIP22.91■■□□□ 1.26
LMX1B-203ENST00000526117 LGR6Q9HBX8 967 aa22.91■■□□□ 1.26
LMX1B-203ENST00000526117 LRRC4BQ9NT99 713 aa22.91■■□□□ 1.26
LMX1B-203ENST00000526117 SIPA1L3O60292 1781 aaPredicted RBP22.91■■□□□ 1.26
LMX1B-203ENST00000526117 ATG3Q9NT62 314 aa22.9■■□□□ 1.26
LMX1B-203ENST00000526117 NFATC2IPQ8NCF5 419 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms