RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 KLHL34Q8N239 644 aa23.59■■□□□ 1.37
CCS-204ENST00000526066 CARD14Q9BXL6 1004 aa23.59■■□□□ 1.37
CCS-204ENST00000526066 MAP3K5Q99683 1374 aa23.59■■□□□ 1.37
CCS-204ENST00000526066 SLC16A10Q8TF71 515 aa23.58■■□□□ 1.37
CCS-204ENST00000526066 SYTL4Q96C24 671 aaPredicted RBP23.58■■□□□ 1.37
CCS-204ENST00000526066 LTV1Q96GA3 475 aaPredicted RBP23.58■■□□□ 1.37
CCS-204ENST00000526066 PER1O15534 1290 aaPredicted RBP23.57■■□□□ 1.36
CCS-204ENST00000526066 GPR162Q16538 588 aa23.57■■□□□ 1.36
CCS-204ENST00000526066 ZNF827Q17R98 1081 aa23.57■■□□□ 1.36
CCS-204ENST00000526066 IP6K1Q92551 441 aa23.57■■□□□ 1.36
CCS-204ENST00000526066 NSD3Q9BZ95 1437 aa23.56■■□□□ 1.36
CCS-204ENST00000526066 QSER1Q2KHR3 1735 aa23.56■■□□□ 1.36
CCS-204ENST00000526066 COG3Q96JB2 828 aa23.55■■□□□ 1.36
CCS-204ENST00000526066 LRRC4BQ9NT99 713 aa23.55■■□□□ 1.36
CCS-204ENST00000526066 TFCP2L1Q9NZI6 479 aa23.54■■□□□ 1.36
CCS-204ENST00000526066 KNSTRNQ9Y448 316 aa23.54■■□□□ 1.36
CCS-204ENST00000526066 SENP3-EIF4A1A0A087X0R7 540 aa23.53■■□□□ 1.36
CCS-204ENST00000526066 AMPHP49418 695 aa23.53■■□□□ 1.36
CCS-204ENST00000526066 PELP1Q8IZL8 1130 aaKnown RBP23.52■■□□□ 1.36
CCS-204ENST00000526066 AKT1S1Q96B36 256 aa23.52■■□□□ 1.36
CCS-204ENST00000526066 DOT1LQ8TEK3 1739 aa23.52■■□□□ 1.36
CCS-204ENST00000526066 C1QTNF8P60827 252 aa23.51■■□□□ 1.35
CCS-204ENST00000526066 CGNL1Q0VF96 1302 aa23.51■■□□□ 1.35
CCS-204ENST00000526066 NPC1L1Q9UHC9 1359 aa23.51■■□□□ 1.35
CCS-204ENST00000526066 PRIM1P49642 420 aaKnown RBP23.49■■□□□ 1.35
CCS-204ENST00000526066 UTRNP46939 3433 aa23.49■■□□□ 1.35
CCS-204ENST00000526066 AMER1Q5JTC6 1135 aaPredicted RBP23.48■■□□□ 1.35
CCS-204ENST00000526066 ZCRB1Q8TBF4 217 aaKnown RBP23.48■■□□□ 1.35
CCS-204ENST00000526066 PNPLA7Q6ZV29 1317 aa23.48■■□□□ 1.35
CCS-204ENST00000526066 NSD2O96028 1365 aa23.48■■□□□ 1.35
CCS-204ENST00000526066 MSH5O43196 834 aa23.47■■□□□ 1.35
CCS-204ENST00000526066 HOXC9P31274 260 aa23.47■■□□□ 1.35
CCS-204ENST00000526066 MAP3K19Q56UN5 1328 aa23.47■■□□□ 1.35
CCS-204ENST00000526066 LY75O60449 1722 aa23.46■■□□□ 1.35
CCS-204ENST00000526066 SMG6Q86US8 1419 aaKnown RBP23.46■■□□□ 1.35
CCS-204ENST00000526066 CCNL1Q9UK58 526 aaPredicted RBP23.46■■□□□ 1.35
CCS-204ENST00000526066 TUBGCP6Q96RT7 1819 aa23.45■■□□□ 1.34
CCS-204ENST00000526066 FYB1O15117 783 aa23.45■■□□□ 1.34
CCS-204ENST00000526066 RTL1A6NKG5 1358 aa23.44■■□□□ 1.34
CCS-204ENST00000526066 HMGB2P26583 209 aaKnown RBP23.44■■□□□ 1.34
CCS-204ENST00000526066 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
CCS-204ENST00000526066 COL24A1Q17RW2 1714 aa23.43■■□□□ 1.34
CCS-204ENST00000526066 KCNQ4P56696 695 aa23.43■■□□□ 1.34
CCS-204ENST00000526066 RAPGEF4Q8WZA2 1011 aa23.43■■□□□ 1.34
CCS-204ENST00000526066 GIGYF1O75420 1035 aaPredicted RBP23.42■■□□□ 1.34
CCS-204ENST00000526066 MEGF6O75095 1541 aa23.41■■□□□ 1.34
CCS-204ENST00000526066 SHANK3Q9BYB0 1731 aa23.41■■□□□ 1.34
CCS-204ENST00000526066 KIF20BQ96Q89 1820 aa23.4■■□□□ 1.34
CCS-204ENST00000526066 GRIN3BO60391 1043 aa23.39■■□□□ 1.33
CCS-204ENST00000526066 GGNBP2Q9H3C7 697 aa23.39■■□□□ 1.33
CCS-204ENST00000526066 TATP17735 454 aaPredicted RBP23.38■■□□□ 1.33
CCS-204ENST00000526066 DIEXFQ68CQ4 756 aaKnown RBP23.38■■□□□ 1.33
CCS-204ENST00000526066 CC2D1BQ5T0F9 858 aaKnown RBP23.37■■□□□ 1.33
CCS-204ENST00000526066 FBLN1P23142 703 aa23.36■■□□□ 1.33
CCS-204ENST00000526066 RRS1Q15050 365 aaKnown RBP23.36■■□□□ 1.33
CCS-204ENST00000526066 NLGN2Q8NFZ4 835 aa23.36■■□□□ 1.33
CCS-204ENST00000526066 ANKRD26Q9UPS8 1709 aa23.36■■□□□ 1.33
CCS-204ENST00000526066 PCDH11XQ9BZA7 1347 aa23.35■■□□□ 1.33
CCS-204ENST00000526066 PCDH11YQ9BZA8 1340 aa23.35■■□□□ 1.33
CCS-204ENST00000526066 C5P01031 1676 aa23.35■■□□□ 1.33
CCS-204ENST00000526066 IFFO2Q5TF58 517 aa23.34■■□□□ 1.33
CCS-204ENST00000526066 NBPF6Q5VWK0 638 aa23.34■■□□□ 1.33
CCS-204ENST00000526066 USHBP1Q8N6Y0 703 aa23.34■■□□□ 1.33
CCS-204ENST00000526066 FLAD1Q8NFF5 587 aa23.34■■□□□ 1.33
CCS-204ENST00000526066 NBPF4Q96M43 638 aa23.34■■□□□ 1.33
CCS-204ENST00000526066 RALBP1Q15311 655 aa23.33■■□□□ 1.33
CCS-204ENST00000526066 MORC1Q86VD1 984 aa23.33■■□□□ 1.33
CCS-204ENST00000526066 COL23A1Q86Y22 540 aaPredicted RBP23.33■■□□□ 1.33
CCS-204ENST00000526066 MSL1Q68DK7 614 aa23.32■■□□□ 1.32
CCS-204ENST00000526066 PRKRIP1Q9H875 184 aaPredicted RBP23.32■■□□□ 1.32
CCS-204ENST00000526066 ANP32CO43423 234 aa23.31■■□□□ 1.32
CCS-204ENST00000526066 INSRP06213 1382 aa23.29■■□□□ 1.32
CCS-204ENST00000526066 FLT4P35916 1363 aa23.29■■□□□ 1.32
CCS-204ENST00000526066 PALLDQ8WX93 1383 aa23.29■■□□□ 1.32
CCS-204ENST00000526066 MPRIPQ6WCQ1 1025 aa23.29■■□□□ 1.32
CCS-204ENST00000526066 KIF24Q5T7B8 1368 aa23.28■■□□□ 1.32
CCS-204ENST00000526066 SMARCC1Q92922 1105 aaPredicted RBP23.28■■□□□ 1.32
CCS-204ENST00000526066 YBX3P16989 372 aaKnown RBP eCLIP23.27■■□□□ 1.32
CCS-204ENST00000526066 CNGB1Q14028 1251 aaPredicted RBP23.27■■□□□ 1.32
CCS-204ENST00000526066 AK7Q96M32 723 aa23.27■■□□□ 1.32
CCS-204ENST00000526066 CD2APQ9Y5K6 639 aa23.27■■□□□ 1.32
CCS-204ENST00000526066 TAF1LQ8IZX4 1826 aa23.26■■□□□ 1.31
CCS-204ENST00000526066 HSP90AB2PQ58FF8 381 aa23.26■■□□□ 1.31
CCS-204ENST00000526066 C4BP0C0L5 1744 aa23.22■■□□□ 1.31
CCS-204ENST00000526066 ITGB4P16144 1822 aa23.22■■□□□ 1.31
CCS-204ENST00000526066 MYBBP1AQ9BQG0 1328 aaKnown RBP23.22■■□□□ 1.31
CCS-204ENST00000526066 PPP2R1AP30153 589 aa23.21■■□□□ 1.31
CCS-204ENST00000526066 TNNT2P45379 298 aaPredicted RBP23.21■■□□□ 1.31
CCS-204ENST00000526066 SPG7Q9UQ90 795 aa23.21■■□□□ 1.31
CCS-204ENST00000526066 ATP10DQ9P241 1426 aa23.21■■□□□ 1.31
CCS-204ENST00000526066 PKD1L3Q7Z443 1732 aa23.2■■□□□ 1.3
CCS-204ENST00000526066 PPM1GO15355 546 aaPredicted RBP23.2■■□□□ 1.3
CCS-204ENST00000526066 GPBP1L1Q9HC44 474 aaPredicted RBP23.2■■□□□ 1.3
CCS-204ENST00000526066 CYP27B1O15528 508 aa23.19■■□□□ 1.3
CCS-204ENST00000526066 PHF14O94880 888 aa23.19■■□□□ 1.3
CCS-204ENST00000526066 POLKQ9UBT6 870 aa23.19■■□□□ 1.3
CCS-204ENST00000526066 TOGARAM1Q9Y4F4 1720 aa23.19■■□□□ 1.3
CCS-204ENST00000526066 GOLGB1Q14789 3259 aaKnown RBP23.17■■□□□ 1.3
CCS-204ENST00000526066 UBR3Q6ZT12 1888 aa23.16■■□□□ 1.3
CCS-204ENST00000526066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms