RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 ADAMTS8Q9UP79 889 aa8.78□□□□□ -1
CSDE1-211ENST00000525970 GSK3AP49840 483 aa8.77□□□□□ -1.01
CSDE1-211ENST00000525970 RNF144AP50876 292 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-211ENST00000525970 MCCD1P59942 119 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-211ENST00000525970 ZNF385CQ66K41 422 aaPredicted RBP8.77□□□□□ -1.01
CSDE1-211ENST00000525970 CYLDQ9NQC7 956 aa8.77□□□□□ -1.01
CSDE1-211ENST00000525970 GPC1P35052 558 aa8.76□□□□□ -1.01
CSDE1-211ENST00000525970 SVOPQ8N4V2 548 aa8.76□□□□□ -1.01
CSDE1-211ENST00000525970 GMCL1Q96IK5 515 aa8.76□□□□□ -1.01
CSDE1-211ENST00000525970 SOCS7O14512 581 aa8.75□□□□□ -1.01
CSDE1-211ENST00000525970 GIGYF1O75420 1035 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-211ENST00000525970 FBXO45P0C2W1 286 aa8.75□□□□□ -1.01
CSDE1-211ENST00000525970 RNF20Q5VTR2 975 aa8.75□□□□□ -1.01
CSDE1-211ENST00000525970 GJD4Q96KN9 370 aaPredicted RBP8.75□□□□□ -1.01
CSDE1-211ENST00000525970 PCDHB9Q9Y5E1 797 aa8.75□□□□□ -1.01
CSDE1-211ENST00000525970 ATP5J2-PTCD1G3V325 749 aa8.74□□□□□ -1.01
CSDE1-211ENST00000525970 TMEM151AQ8N4L1 468 aa8.74□□□□□ -1.01
CSDE1-211ENST00000525970 ARHGEF15O94989 841 aa8.72□□□□□ -1.01
CSDE1-211ENST00000525970 ERVK-9P63128 1117 aa8.72□□□□□ -1.01
CSDE1-211ENST00000525970 RASSF7Q02833 373 aa8.72□□□□□ -1.01
CSDE1-211ENST00000525970 SRSF11Q05519 484 aaKnown RBP8.72□□□□□ -1.01
CSDE1-211ENST00000525970 CC2D2BQ6DHV5 1058 aa8.72□□□□□ -1.01
CSDE1-211ENST00000525970 BANK1Q8NDB2 785 aa8.72□□□□□ -1.01
CSDE1-211ENST00000525970 ZNF330Q9Y3S2 320 aaPredicted RBP8.72□□□□□ -1.01
CSDE1-211ENST00000525970 GDF11O95390 407 aa8.71□□□□□ -1.02
CSDE1-211ENST00000525970 ADAMTS2O95450 1211 aa8.71□□□□□ -1.02
CSDE1-211ENST00000525970 NR1H3Q13133 447 aa8.71□□□□□ -1.02
CSDE1-211ENST00000525970 PRICKLE2Q7Z3G6 844 aa8.71□□□□□ -1.02
CSDE1-211ENST00000525970 WHAMMQ8TF30 809 aa8.71□□□□□ -1.02
CSDE1-211ENST00000525970 TRIM22Q8IYM9 498 aa8.7□□□□□ -1.02
CSDE1-211ENST00000525970 KCTD17Q8N5Z5 321 aa8.7□□□□□ -1.02
CSDE1-211ENST00000525970 ZMYND15Q9H091 742 aa8.7□□□□□ -1.02
CSDE1-211ENST00000525970 CUEDC1Q9NWM3 386 aaPredicted RBP8.7□□□□□ -1.02
CSDE1-211ENST00000525970 A0A1W2PRU2 124 aa8.69□□□□□ -1.02
CSDE1-211ENST00000525970 FOXR1Q6PIV2 292 aa8.69□□□□□ -1.02
CSDE1-211ENST00000525970 CYP2U1Q7Z449 544 aa8.69□□□□□ -1.02
CSDE1-211ENST00000525970 APBB1O00213 710 aa8.68□□□□□ -1.02
CSDE1-211ENST00000525970 MEN1O00255 615 aa8.68□□□□□ -1.02
CSDE1-211ENST00000525970 RHOQP17081 205 aa8.68□□□□□ -1.02
CSDE1-211ENST00000525970 MARSP56192 900 aaKnown RBP8.68□□□□□ -1.02
CSDE1-211ENST00000525970 GAS6Q14393 721 aa8.68□□□□□ -1.02
CSDE1-211ENST00000525970 ZNF837Q96EG3 531 aaPredicted RBP8.68□□□□□ -1.02
CSDE1-211ENST00000525970 NLRP3Q96P20 1036 aa8.68□□□□□ -1.02
CSDE1-211ENST00000525970 DYRK1BQ9Y463 629 aa8.68□□□□□ -1.02
CSDE1-211ENST00000525970 H7C1W4 665 aa8.67□□□□□ -1.02
CSDE1-211ENST00000525970 MAP3K10Q02779 954 aa8.67□□□□□ -1.02
CSDE1-211ENST00000525970 CLN3Q13286 438 aa8.67□□□□□ -1.02
CSDE1-211ENST00000525970 WDR44Q5JSH3 913 aa8.67□□□□□ -1.02
CSDE1-211ENST00000525970 KANK3Q6NY19 840 aa8.67□□□□□ -1.02
CSDE1-211ENST00000525970 SCARF2Q96GP6 870 aaPredicted RBP8.67□□□□□ -1.02
CSDE1-211ENST00000525970 SLC27A3Q5K4L6 730 aa8.66□□□□□ -1.02
CSDE1-211ENST00000525970 MBIPQ9NS73 344 aa8.66□□□□□ -1.02
CSDE1-211ENST00000525970 NDUFB9Q9Y6M9 179 aa8.66□□□□□ -1.02
CSDE1-211ENST00000525970 SPATA31C2B4DYI2 1134 aa8.65□□□□□ -1.02
CSDE1-211ENST00000525970 LYPD4Q6UWN0 246 aa8.65□□□□□ -1.02
CSDE1-211ENST00000525970 GRIP2Q9C0E4 1043 aa8.65□□□□□ -1.02
CSDE1-211ENST00000525970 ENAMQ9NRM1 1142 aa8.65□□□□□ -1.02
CSDE1-211ENST00000525970 PCDHB11Q9Y5F2 797 aa8.65□□□□□ -1.02
CSDE1-211ENST00000525970 DNMT3AQ9Y6K1 912 aaPredicted RBP8.65□□□□□ -1.02
CSDE1-211ENST00000525970 TRAK2O60296 914 aa8.64□□□□□ -1.03
CSDE1-211ENST00000525970 CELA2BP08218 269 aaPredicted RBP8.64□□□□□ -1.03
CSDE1-211ENST00000525970 ESF1Q9H501 851 aaKnown RBP8.64□□□□□ -1.03
CSDE1-211ENST00000525970 GPR37L1O60883 481 aa8.63□□□□□ -1.03
CSDE1-211ENST00000525970 IRS1P35568 1242 aa8.63□□□□□ -1.03
CSDE1-211ENST00000525970 SCTRP47872 440 aa8.63□□□□□ -1.03
CSDE1-211ENST00000525970 POU4F2Q12837 409 aa8.63□□□□□ -1.03
CSDE1-211ENST00000525970 DBN1Q16643 649 aa8.63□□□□□ -1.03
CSDE1-211ENST00000525970 NBPF10Q6P3W6 841 aaKnown RBP8.63□□□□□ -1.03
CSDE1-211ENST00000525970 RIPOR1Q6ZS17 1223 aa8.63□□□□□ -1.03
CSDE1-211ENST00000525970 NBPF15Q8N660 670 aa8.63□□□□□ -1.03
CSDE1-211ENST00000525970 MTMR14Q8NCE2 650 aa8.63□□□□□ -1.03
CSDE1-211ENST00000525970 TRERF1Q96PN7 1200 aa8.63□□□□□ -1.03
CSDE1-211ENST00000525970 OSBPL3Q9H4L5 887 aa8.63□□□□□ -1.03
CSDE1-211ENST00000525970 SNRKQ9NRH2 765 aa8.62□□□□□ -1.03
CSDE1-211ENST00000525970 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
CSDE1-211ENST00000525970 GNRH1P01148 92 aa8.61□□□□□ -1.03
CSDE1-211ENST00000525970 IGHA1P01876 353 aa8.61□□□□□ -1.03
CSDE1-211ENST00000525970 FOXK2Q01167 660 aa8.61□□□□□ -1.03
CSDE1-211ENST00000525970 TAS1R3Q7RTX0 852 aa8.61□□□□□ -1.03
CSDE1-211ENST00000525970 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
CSDE1-211ENST00000525970 ARHGEF10LQ9HCE6 1279 aa8.61□□□□□ -1.03
CSDE1-211ENST00000525970 IGF1RP08069 1367 aa8.61□□□□□ -1.03
CSDE1-211ENST00000525970 SUZ12Q15022 739 aaKnown RBP8.6□□□□□ -1.03
CSDE1-211ENST00000525970 GTPBP3Q969Y2 492 aaKnown RBP8.6□□□□□ -1.03
CSDE1-211ENST00000525970 GAS2L1Q99501 681 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-211ENST00000525970 LRRC4BQ9NT99 713 aa8.6□□□□□ -1.03
CSDE1-211ENST00000525970 GPR25O00155 361 aa8.59□□□□□ -1.03
CSDE1-211ENST00000525970 WASLO00401 505 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-211ENST00000525970 MYCP01106 439 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-211ENST00000525970 F11P03951 625 aa8.59□□□□□ -1.03
CSDE1-211ENST00000525970 ESYT1Q9BSJ8 1104 aa8.59□□□□□ -1.03
CSDE1-211ENST00000525970 TIMMDC1Q9NPL8 285 aa8.59□□□□□ -1.03
CSDE1-211ENST00000525970 NSFL1CQ9UNZ2 370 aaKnown RBP8.59□□□□□ -1.03
CSDE1-211ENST00000525970 PHF20L1A8MW92 1017 aa8.58□□□□□ -1.04
CSDE1-211ENST00000525970 BCRP11274 1271 aa8.58□□□□□ -1.04
CSDE1-211ENST00000525970 UBTFP17480 764 aaKnown RBP8.58□□□□□ -1.04
CSDE1-211ENST00000525970 CNKSR1Q969H4 720 aa8.57□□□□□ -1.04
CSDE1-211ENST00000525970 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
CSDE1-211ENST00000525970 CEP126Q9P2H0 1117 aa8.57□□□□□ -1.04
CSDE1-211ENST00000525970 MX2P20592 715 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms