RNA–Protein interactions for RNA: ENST00000525642.1

PKP3-203, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 495 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-203ENST00000525642 TATP17735 454 aaPredicted RBP23.29■■□□□ 1.32
PKP3-203ENST00000525642 ZCRB1Q8TBF4 217 aaKnown RBP23.29■■□□□ 1.32
PKP3-203ENST00000525642 TNS1Q9HBL0 1735 aaKnown RBP23.29■■□□□ 1.32
PKP3-203ENST00000525642 CNGB1Q14028 1251 aaPredicted RBP23.28■■□□□ 1.32
PKP3-203ENST00000525642 RALBP1Q15311 655 aa23.27■■□□□ 1.32
PKP3-203ENST00000525642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.27■■□□□ 1.32
PKP3-203ENST00000525642 DIAPH1O60610 1272 aaKnown RBP23.26■■□□□ 1.31
PKP3-203ENST00000525642 TRIM37O94972 964 aa23.22■■□□□ 1.31
PKP3-203ENST00000525642 AEBP1Q8IUX7 1158 aa23.22■■□□□ 1.31
PKP3-203ENST00000525642 NHSQ6T4R5 1651 aa23.21■■□□□ 1.31
PKP3-203ENST00000525642 PCDH11XQ9BZA7 1347 aa23.2■■□□□ 1.3
PKP3-203ENST00000525642 PCDH11YQ9BZA8 1340 aa23.2■■□□□ 1.3
PKP3-203ENST00000525642 CYP27B1O15528 508 aa23.2■■□□□ 1.3
PKP3-203ENST00000525642 SULT6B1Q6IMI4 303 aa23.2■■□□□ 1.3
PKP3-203ENST00000525642 DDX54Q8TDD1 881 aaKnown RBP23.2■■□□□ 1.3
PKP3-203ENST00000525642 CFAP53Q96M91 514 aa23.2■■□□□ 1.3
PKP3-203ENST00000525642 BCL11BQ9C0K0 894 aaPredicted RBP23.2■■□□□ 1.3
PKP3-203ENST00000525642 NKX1-1Q15270 411 aaPredicted RBP23.19■■□□□ 1.3
PKP3-203ENST00000525642 PRKRIP1Q9H875 184 aaPredicted RBP23.19■■□□□ 1.3
PKP3-203ENST00000525642 SPG7Q9UQ90 795 aa23.19■■□□□ 1.3
PKP3-203ENST00000525642 SF3B2Q13435 895 aaKnown RBP23.17■■□□□ 1.3
PKP3-203ENST00000525642 PTF1AQ7RTS3 328 aa23.17■■□□□ 1.3
PKP3-203ENST00000525642 MYBBP1AQ9BQG0 1328 aaKnown RBP23.16■■□□□ 1.3
PKP3-203ENST00000525642 DEFB132Q7Z7B7 95 aa23.16■■□□□ 1.3
PKP3-203ENST00000525642 RGPD3A6NKT7 1758 aaPredicted RBP23.16■■□□□ 1.3
PKP3-203ENST00000525642 RGPD4Q7Z3J3 1758 aa23.16■■□□□ 1.3
PKP3-203ENST00000525642 BAG6P46379 1132 aa23.15■■□□□ 1.3
PKP3-203ENST00000525642 AMOTQ4VCS5 1084 aa23.15■■□□□ 1.3
PKP3-203ENST00000525642 CAMKK2Q96RR4 588 aa23.15■■□□□ 1.3
PKP3-203ENST00000525642 PLSCR1O15162 318 aa23.14■■□□□ 1.29
PKP3-203ENST00000525642 KCNQ2O43526 872 aa23.14■■□□□ 1.29
PKP3-203ENST00000525642 PLEKHO1Q53GL0 409 aaPredicted RBP23.14■■□□□ 1.29
PKP3-203ENST00000525642 DOT1LQ8TEK3 1739 aa23.13■■□□□ 1.29
PKP3-203ENST00000525642 APBA3O96018 575 aa23.13■■□□□ 1.29
PKP3-203ENST00000525642 PHKG2P15735 406 aa23.13■■□□□ 1.29
PKP3-203ENST00000525642 HMOX1P09601 288 aa23.12■■□□□ 1.29
PKP3-203ENST00000525642 IFNL2Q8IZJ0 200 aa23.12■■□□□ 1.29
PKP3-203ENST00000525642 NUDCQ9Y266 331 aa23.12■■□□□ 1.29
PKP3-203ENST00000525642 TOGARAM1Q9Y4F4 1720 aa23.12■■□□□ 1.29
PKP3-203ENST00000525642 EN1Q05925 392 aaPredicted RBP23.11■■□□□ 1.29
PKP3-203ENST00000525642 ACSBG1Q96GR2 724 aa23.11■■□□□ 1.29
PKP3-203ENST00000525642 BTAF1O14981 1849 aa23.1■■□□□ 1.29
PKP3-203ENST00000525642 RREB1Q92766 1687 aa23.1■■□□□ 1.29
PKP3-203ENST00000525642 U2SURPO15042 1029 aaKnown RBP23.1■■□□□ 1.29
PKP3-203ENST00000525642 RSPH6AQ9H0K4 717 aa23.1■■□□□ 1.29
PKP3-203ENST00000525642 ITGB4P16144 1822 aa23.08■■□□□ 1.28
PKP3-203ENST00000525642 KAT6BQ8WYB5 2073 aa23.07■■□□□ 1.28
PKP3-203ENST00000525642 FCHSD2O94868 740 aa23.07■■□□□ 1.28
PKP3-203ENST00000525642 PRIM1P49642 420 aaKnown RBP23.07■■□□□ 1.28
PKP3-203ENST00000525642 EZH2Q15910 746 aaKnown RBP23.07■■□□□ 1.28
PKP3-203ENST00000525642 ZNF530Q6P9A1 599 aaPredicted RBP23.06■■□□□ 1.28
PKP3-203ENST00000525642 HSP90AB1P08238 724 aaKnown RBP23.05■■□□□ 1.28
PKP3-203ENST00000525642 PROM2Q8N271 834 aa23.05■■□□□ 1.28
PKP3-203ENST00000525642 ADAMTS7Q9UKP4 1686 aa23.05■■□□□ 1.28
PKP3-203ENST00000525642 U2AF1L5P0DN76 240 aaPredicted RBP23.04■■□□□ 1.28
PKP3-203ENST00000525642 U2AF1Q01081 240 aaKnown RBP eCLIP23.04■■□□□ 1.28
PKP3-203ENST00000525642 MTHFSDQ2M296 383 aaKnown RBP23.04■■□□□ 1.28
PKP3-203ENST00000525642 DCAF5Q96JK2 942 aa23.04■■□□□ 1.28
PKP3-203ENST00000525642 KDM6AO15550 1401 aaPredicted RBP23.04■■□□□ 1.28
PKP3-203ENST00000525642 AKAP4Q5JQC9 854 aa23.03■■□□□ 1.28
PKP3-203ENST00000525642 NUP188Q5SRE5 1749 aa23.02■■□□□ 1.28
PKP3-203ENST00000525642 PRKAR2BP31323 418 aa23.02■■□□□ 1.28
PKP3-203ENST00000525642 SCN11AQ9UI33 1791 aa23.01■■□□□ 1.27
PKP3-203ENST00000525642 ERVV-2B6SEH9 535 aa23.01■■□□□ 1.27
PKP3-203ENST00000525642 PHACTR3Q96KR7 559 aa23.01■■□□□ 1.27
PKP3-203ENST00000525642 LY75O60449 1722 aa23.01■■□□□ 1.27
PKP3-203ENST00000525642 C1orf141Q5JVX7 400 aa23■■□□□ 1.27
PKP3-203ENST00000525642 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
PKP3-203ENST00000525642 PIGBQ92521 554 aa22.99■■□□□ 1.27
PKP3-203ENST00000525642 SYTL4Q96C24 671 aaPredicted RBP22.99■■□□□ 1.27
PKP3-203ENST00000525642 TXNRD1Q16881 649 aa22.98■■□□□ 1.27
PKP3-203ENST00000525642 GAS2L2Q8NHY3 880 aa22.98■■□□□ 1.27
PKP3-203ENST00000525642 VIRMAQ69YN4 1812 aaKnown RBP22.98■■□□□ 1.27
PKP3-203ENST00000525642 MPRIPQ6WCQ1 1025 aa22.96■■□□□ 1.27
PKP3-203ENST00000525642 MRC1P22897 1456 aa22.96■■□□□ 1.27
PKP3-203ENST00000525642 ANP32CO43423 234 aa22.95■■□□□ 1.26
PKP3-203ENST00000525642 PAPPAQ13219 1627 aa22.94■■□□□ 1.26
PKP3-203ENST00000525642 RNMTO43148 476 aaKnown RBP22.94■■□□□ 1.26
PKP3-203ENST00000525642 LGR6Q9HBX8 967 aa22.94■■□□□ 1.26
PKP3-203ENST00000525642 TMOD3Q9NYL9 352 aa22.94■■□□□ 1.26
PKP3-203ENST00000525642 MAP3K5Q99683 1374 aa22.93■■□□□ 1.26
PKP3-203ENST00000525642 SLC27A3Q5K4L6 730 aa22.93■■□□□ 1.26
PKP3-203ENST00000525642 LRRC4BQ9NT99 713 aa22.93■■□□□ 1.26
PKP3-203ENST00000525642 CEMIPQ8WUJ3 1361 aa22.92■■□□□ 1.26
PKP3-203ENST00000525642 GNAT3A8MTJ3 354 aa22.92■■□□□ 1.26
PKP3-203ENST00000525642 SMARCC1Q92922 1105 aaPredicted RBP22.92■■□□□ 1.26
PKP3-203ENST00000525642 PNNQ9H307 717 aaKnown RBP22.92■■□□□ 1.26
PKP3-203ENST00000525642 CCDC184Q52MB2 194 aa22.91■■□□□ 1.26
PKP3-203ENST00000525642 IL17REQ8NFR9 667 aa22.91■■□□□ 1.26
PKP3-203ENST00000525642 PALLDQ8WX93 1383 aa22.9■■□□□ 1.26
PKP3-203ENST00000525642 SLC52A2Q9HAB3 445 aa22.9■■□□□ 1.26
PKP3-203ENST00000525642 ATG3Q9NT62 314 aa22.9■■□□□ 1.26
PKP3-203ENST00000525642 SIPA1L3O60292 1781 aaPredicted RBP22.89■■□□□ 1.26
PKP3-203ENST00000525642 HTATSF1O43719 755 aaKnown RBP22.89■■□□□ 1.25
PKP3-203ENST00000525642 CABP4P57796 275 aa22.89■■□□□ 1.25
PKP3-203ENST00000525642 NFATC2IPQ8NCF5 419 aa22.89■■□□□ 1.25
PKP3-203ENST00000525642 ASAP1Q9ULH1 1129 aa22.89■■□□□ 1.25
PKP3-203ENST00000525642 ZNF831Q5JPB2 1677 aa22.89■■□□□ 1.25
PKP3-203ENST00000525642 DLG5Q8TDM6 1919 aa22.88■■□□□ 1.25
PKP3-203ENST00000525642 ADAMTS8Q9UP79 889 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms