RNA–Protein interactions for RNA: ENST00000524510.1

NECTIN1-205, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 5

Gene NECTIN1, Length 832 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-205ENST00000524510 AKT1S1Q96B36 256 aa18.26■□□□□ 0.51
NECTIN1-205ENST00000524510 SGIP1Q9BQI5 828 aa18.26■□□□□ 0.51
NECTIN1-205ENST00000524510 KIF24Q5T7B8 1368 aa18.26■□□□□ 0.51
NECTIN1-205ENST00000524510 SMG6Q86US8 1419 aaKnown RBP18.25■□□□□ 0.51
NECTIN1-205ENST00000524510 CASZ1Q86V15 1759 aa18.25■□□□□ 0.51
NECTIN1-205ENST00000524510 MEGF6O75095 1541 aa18.25■□□□□ 0.51
NECTIN1-205ENST00000524510 TATP17735 454 aaPredicted RBP18.24■□□□□ 0.51
NECTIN1-205ENST00000524510 FLT4P35916 1363 aa18.24■□□□□ 0.51
NECTIN1-205ENST00000524510 YY1P25490 414 aa18.23■□□□□ 0.51
NECTIN1-205ENST00000524510 NSD3Q9BZ95 1437 aa18.23■□□□□ 0.51
NECTIN1-205ENST00000524510 FAM208AQ9UK61 1670 aaKnown RBP18.22■□□□□ 0.51
NECTIN1-205ENST00000524510 NSD2O96028 1365 aa18.22■□□□□ 0.51
NECTIN1-205ENST00000524510 KCNQ4P56696 695 aa18.22■□□□□ 0.51
NECTIN1-205ENST00000524510 SYT17Q9BSW7 474 aa18.22■□□□□ 0.51
NECTIN1-205ENST00000524510 FHDC1Q9C0D6 1143 aaPredicted RBP18.22■□□□□ 0.51
NECTIN1-205ENST00000524510 EMILIN1Q9Y6C2 1016 aa18.22■□□□□ 0.51
NECTIN1-205ENST00000524510 SLC16A10Q8TF71 515 aa18.21■□□□□ 0.51
NECTIN1-205ENST00000524510 ARXQ96QS3 562 aa18.21■□□□□ 0.51
NECTIN1-205ENST00000524510 TFCP2L1Q9NZI6 479 aa18.2■□□□□ 0.5
NECTIN1-205ENST00000524510 PAPPAQ13219 1627 aa18.2■□□□□ 0.5
NECTIN1-205ENST00000524510 PPM1GO15355 546 aaPredicted RBP18.19■□□□□ 0.5
NECTIN1-205ENST00000524510 CCNL1Q9UK58 526 aaPredicted RBP18.19■□□□□ 0.5
NECTIN1-205ENST00000524510 PCDH11XQ9BZA7 1347 aa18.19■□□□□ 0.5
NECTIN1-205ENST00000524510 PCDH11YQ9BZA8 1340 aa18.19■□□□□ 0.5
NECTIN1-205ENST00000524510 BTAF1O14981 1849 aa18.19■□□□□ 0.5
NECTIN1-205ENST00000524510 WASHC2AQ641Q2 1341 aa18.18■□□□□ 0.5
NECTIN1-205ENST00000524510 PNPLA7Q6ZV29 1317 aa18.18■□□□□ 0.5
NECTIN1-205ENST00000524510 CYP27B1O15528 508 aa18.17■□□□□ 0.5
NECTIN1-205ENST00000524510 POLR3GLQ9BT43 218 aa18.17■□□□□ 0.5
NECTIN1-205ENST00000524510 EIF4G2P78344 907 aaKnown RBP eCLIP18.16■□□□□ 0.5
NECTIN1-205ENST00000524510 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
NECTIN1-205ENST00000524510 POLD1P28340 1107 aa18.14■□□□□ 0.49
NECTIN1-205ENST00000524510 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
NECTIN1-205ENST00000524510 EYA1Q99502 592 aa18.14■□□□□ 0.49
NECTIN1-205ENST00000524510 MAP3K5Q99683 1374 aa18.14■□□□□ 0.49
NECTIN1-205ENST00000524510 MYOM1P52179 1685 aa18.13■□□□□ 0.49
NECTIN1-205ENST00000524510 HSPA5P11021 654 aaKnown RBP18.13■□□□□ 0.49
NECTIN1-205ENST00000524510 HMGB2P26583 209 aaKnown RBP18.13■□□□□ 0.49
NECTIN1-205ENST00000524510 SPG7Q9UQ90 795 aa18.13■□□□□ 0.49
NECTIN1-205ENST00000524510 NKX1-1Q15270 411 aaPredicted RBP18.12■□□□□ 0.49
NECTIN1-205ENST00000524510 CCER1Q8TC90 406 aaPredicted RBP18.12■□□□□ 0.49
NECTIN1-205ENST00000524510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.49
NECTIN1-205ENST00000524510 NCAPD2Q15021 1401 aa18.12■□□□□ 0.49
NECTIN1-205ENST00000524510 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
NECTIN1-205ENST00000524510 PANK3Q9H999 370 aa18.11■□□□□ 0.49
NECTIN1-205ENST00000524510 RGPD2P0DJD1 1756 aa18.11■□□□□ 0.49
NECTIN1-205ENST00000524510 KAT6BQ8WYB5 2073 aa18.11■□□□□ 0.49
NECTIN1-205ENST00000524510 COL23A1Q86Y22 540 aaPredicted RBP18.1■□□□□ 0.49
NECTIN1-205ENST00000524510 PIGBQ92521 554 aa18.1■□□□□ 0.49
NECTIN1-205ENST00000524510 SMARCC1Q92922 1105 aaPredicted RBP18.1■□□□□ 0.49
NECTIN1-205ENST00000524510 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
NECTIN1-205ENST00000524510 MSH5O43196 834 aa18.09■□□□□ 0.49
NECTIN1-205ENST00000524510 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
NECTIN1-205ENST00000524510 DOT1LQ8TEK3 1739 aa18.09■□□□□ 0.49
NECTIN1-205ENST00000524510 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
NECTIN1-205ENST00000524510 EIF4A2Q14240 407 aaKnown RBP18.08■□□□□ 0.48
NECTIN1-205ENST00000524510 IFNL2Q8IZJ0 200 aa18.06■□□□□ 0.48
NECTIN1-205ENST00000524510 KLHL34Q8N239 644 aa18.06■□□□□ 0.48
NECTIN1-205ENST00000524510 FLAD1Q8NFF5 587 aa18.06■□□□□ 0.48
NECTIN1-205ENST00000524510 PHKG2P15735 406 aa18.05■□□□□ 0.48
NECTIN1-205ENST00000524510 GPR162Q16538 588 aa18.05■□□□□ 0.48
NECTIN1-205ENST00000524510 TMOD3Q9NYL9 352 aa18.04■□□□□ 0.48
NECTIN1-205ENST00000524510 LY75O60449 1722 aa18.03■□□□□ 0.48
NECTIN1-205ENST00000524510 LOC102724428A0A0B4J2F2 783 aa18.02■□□□□ 0.48
NECTIN1-205ENST00000524510 SIK1P57059 783 aa18.02■□□□□ 0.48
NECTIN1-205ENST00000524510 MSL1Q68DK7 614 aa18.02■□□□□ 0.48
NECTIN1-205ENST00000524510 MORC1Q86VD1 984 aa18.02■□□□□ 0.48
NECTIN1-205ENST00000524510 ZNF784Q8NCA9 323 aaPredicted RBP18.02■□□□□ 0.48
NECTIN1-205ENST00000524510 NLGN2Q8NFZ4 835 aa18.02■□□□□ 0.48
NECTIN1-205ENST00000524510 AK7Q96M32 723 aa18.02■□□□□ 0.48
NECTIN1-205ENST00000524510 IGSF1Q8N6C5 1336 aa18.01■□□□□ 0.47
NECTIN1-205ENST00000524510 ASAP1Q9ULH1 1129 aa18.01■□□□□ 0.47
NECTIN1-205ENST00000524510 PLEKHG2Q9H7P9 1386 aa18.01■□□□□ 0.47
NECTIN1-205ENST00000524510 UTRNP46939 3433 aa18■□□□□ 0.47
NECTIN1-205ENST00000524510 KNSTRNQ9Y448 316 aa18■□□□□ 0.47
NECTIN1-205ENST00000524510 QSER1Q2KHR3 1735 aa18■□□□□ 0.47
NECTIN1-205ENST00000524510 ANKRD26Q9UPS8 1709 aa17.99■□□□□ 0.47
NECTIN1-205ENST00000524510 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
NECTIN1-205ENST00000524510 AMIGO3Q86WK7 504 aa17.99■□□□□ 0.47
NECTIN1-205ENST00000524510 ATG3Q9NT62 314 aa17.99■□□□□ 0.47
NECTIN1-205ENST00000524510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.98■□□□□ 0.47
NECTIN1-205ENST00000524510 ERVV-2B6SEH9 535 aa17.98■□□□□ 0.47
NECTIN1-205ENST00000524510 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
NECTIN1-205ENST00000524510 LINC00116Q8NCU8 138 aa17.98■□□□□ 0.47
NECTIN1-205ENST00000524510 PKD1L3Q7Z443 1732 aa17.98■□□□□ 0.47
NECTIN1-205ENST00000524510 HSP90AB1P08238 724 aaKnown RBP17.97■□□□□ 0.47
NECTIN1-205ENST00000524510 ATP6V1AP38606 617 aa17.97■□□□□ 0.47
NECTIN1-205ENST00000524510 ITPK1Q13572 414 aa17.97■□□□□ 0.47
NECTIN1-205ENST00000524510 AMOTQ4VCS5 1084 aa17.97■□□□□ 0.47
NECTIN1-205ENST00000524510 SMIM5Q71RC9 77 aa17.97■□□□□ 0.47
NECTIN1-205ENST00000524510 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
NECTIN1-205ENST00000524510 CD2APQ9Y5K6 639 aa17.97■□□□□ 0.47
NECTIN1-205ENST00000524510 COL24A1Q17RW2 1714 aa17.96■□□□□ 0.47
NECTIN1-205ENST00000524510 PHF14O94880 888 aa17.96■□□□□ 0.47
NECTIN1-205ENST00000524510 SSFA2P28290 1259 aa17.96■□□□□ 0.47
NECTIN1-205ENST00000524510 GRIN3BO60391 1043 aa17.95■□□□□ 0.46
NECTIN1-205ENST00000524510 TOGARAM1Q9Y4F4 1720 aa17.95■□□□□ 0.46
NECTIN1-205ENST00000524510 MAP2P11137 1827 aaKnown RBP17.94■□□□□ 0.46
NECTIN1-205ENST00000524510 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
NECTIN1-205ENST00000524510 ZNF530Q6P9A1 599 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms