RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 DDX54Q8TDD1 881 aaKnown RBP13.65□□□□□ -0.22
TTC39A-213ENST00000524442 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
TTC39A-213ENST00000524442 BCL11BQ9C0K0 894 aaPredicted RBP13.65□□□□□ -0.22
TTC39A-213ENST00000524442 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
TTC39A-213ENST00000524442 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
TTC39A-213ENST00000524442 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
TTC39A-213ENST00000524442 PPP2R1AP30153 589 aa13.64□□□□□ -0.23
TTC39A-213ENST00000524442 SPG7Q9UQ90 795 aa13.64□□□□□ -0.23
TTC39A-213ENST00000524442 KDRP35968 1356 aa13.63□□□□□ -0.23
TTC39A-213ENST00000524442 ZNF316A6NFI3 1004 aaPredicted RBP13.63□□□□□ -0.23
TTC39A-213ENST00000524442 APBA3O96018 575 aa13.63□□□□□ -0.23
TTC39A-213ENST00000524442 RALBP1Q15311 655 aa13.63□□□□□ -0.23
TTC39A-213ENST00000524442 DEFB132Q7Z7B7 95 aa13.62□□□□□ -0.23
TTC39A-213ENST00000524442 PLSCR1O15162 318 aa13.61□□□□□ -0.23
TTC39A-213ENST00000524442 AMOTQ4VCS5 1084 aa13.61□□□□□ -0.23
TTC39A-213ENST00000524442 SULT6B1Q6IMI4 303 aa13.61□□□□□ -0.23
TTC39A-213ENST00000524442 TNS1Q9HBL0 1735 aaKnown RBP13.61□□□□□ -0.23
TTC39A-213ENST00000524442 COL3A1P02461 1466 aaPredicted RBP13.61□□□□□ -0.23
TTC39A-213ENST00000524442 EN1Q05925 392 aaPredicted RBP13.6□□□□□ -0.23
TTC39A-213ENST00000524442 PLEKHO1Q53GL0 409 aaPredicted RBP13.6□□□□□ -0.23
TTC39A-213ENST00000524442 CAMKK2Q96RR4 588 aa13.6□□□□□ -0.23
TTC39A-213ENST00000524442 NUDCQ9Y266 331 aa13.6□□□□□ -0.23
TTC39A-213ENST00000524442 CYP27B1O15528 508 aa13.59□□□□□ -0.23
TTC39A-213ENST00000524442 NKX1-1Q15270 411 aaPredicted RBP13.59□□□□□ -0.23
TTC39A-213ENST00000524442 IFNL2Q8IZJ0 200 aa13.59□□□□□ -0.23
TTC39A-213ENST00000524442 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
TTC39A-213ENST00000524442 SBF2Q86WG5 1849 aa13.58□□□□□ -0.24
TTC39A-213ENST00000524442 KCNQ2O43526 872 aa13.58□□□□□ -0.24
TTC39A-213ENST00000524442 AEBP1Q8IUX7 1158 aa13.58□□□□□ -0.24
TTC39A-213ENST00000524442 ACSBG1Q96GR2 724 aa13.58□□□□□ -0.24
TTC39A-213ENST00000524442 SHANK3Q9BYB0 1731 aa13.58□□□□□ -0.24
TTC39A-213ENST00000524442 NHSQ6T4R5 1651 aa13.57□□□□□ -0.24
TTC39A-213ENST00000524442 HSP90AB1P08238 724 aaKnown RBP13.57□□□□□ -0.24
TTC39A-213ENST00000524442 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
TTC39A-213ENST00000524442 PHKG2P15735 406 aa13.56□□□□□ -0.24
TTC39A-213ENST00000524442 PRIM1P49642 420 aaKnown RBP13.56□□□□□ -0.24
TTC39A-213ENST00000524442 EZH2Q15910 746 aaKnown RBP13.56□□□□□ -0.24
TTC39A-213ENST00000524442 PTF1AQ7RTS3 328 aa13.56□□□□□ -0.24
TTC39A-213ENST00000524442 HMOX1P09601 288 aa13.55□□□□□ -0.24
TTC39A-213ENST00000524442 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
TTC39A-213ENST00000524442 MYBBP1AQ9BQG0 1328 aaKnown RBP13.55□□□□□ -0.24
TTC39A-213ENST00000524442 RGPD3A6NKT7 1758 aaPredicted RBP13.55□□□□□ -0.24
TTC39A-213ENST00000524442 RGPD4Q7Z3J3 1758 aa13.55□□□□□ -0.24
TTC39A-213ENST00000524442 C1orf141Q5JVX7 400 aa13.54□□□□□ -0.24
TTC39A-213ENST00000524442 ZNF530Q6P9A1 599 aaPredicted RBP13.54□□□□□ -0.24
TTC39A-213ENST00000524442 DCAF5Q96JK2 942 aa13.54□□□□□ -0.24
TTC39A-213ENST00000524442 PRKRIP1Q9H875 184 aaPredicted RBP13.54□□□□□ -0.24
TTC39A-213ENST00000524442 FCHSD2O94868 740 aa13.53□□□□□ -0.24
TTC39A-213ENST00000524442 ERVV-2B6SEH9 535 aa13.52□□□□□ -0.25
TTC39A-213ENST00000524442 U2AF1L5P0DN76 240 aaPredicted RBP13.52□□□□□ -0.25
TTC39A-213ENST00000524442 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
TTC39A-213ENST00000524442 U2AF1Q01081 240 aaKnown RBP eCLIP13.52□□□□□ -0.25
TTC39A-213ENST00000524442 TXNRD1Q16881 649 aa13.52□□□□□ -0.25
TTC39A-213ENST00000524442 AKAP4Q5JQC9 854 aa13.52□□□□□ -0.25
TTC39A-213ENST00000524442 NBPF14Q5TI25 921 aa13.52□□□□□ -0.25
TTC39A-213ENST00000524442 DOT1LQ8TEK3 1739 aa13.51□□□□□ -0.25
TTC39A-213ENST00000524442 PROM2Q8N271 834 aa13.51□□□□□ -0.25
TTC39A-213ENST00000524442 RSPH6AQ9H0K4 717 aa13.51□□□□□ -0.25
TTC39A-213ENST00000524442 RREB1Q92766 1687 aa13.5□□□□□ -0.25
TTC39A-213ENST00000524442 SLC27A3Q5K4L6 730 aa13.5□□□□□ -0.25
TTC39A-213ENST00000524442 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
TTC39A-213ENST00000524442 GAS2L2Q8NHY3 880 aa13.5□□□□□ -0.25
TTC39A-213ENST00000524442 SMARCC1Q92922 1105 aaPredicted RBP13.5□□□□□ -0.25
TTC39A-213ENST00000524442 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
TTC39A-213ENST00000524442 TMOD3Q9NYL9 352 aa13.5□□□□□ -0.25
TTC39A-213ENST00000524442 BTAF1O14981 1849 aa13.5□□□□□ -0.25
TTC39A-213ENST00000524442 PRKAR2BP31323 418 aa13.49□□□□□ -0.25
TTC39A-213ENST00000524442 MTHFSDQ2M296 383 aaKnown RBP13.49□□□□□ -0.25
TTC39A-213ENST00000524442 PIGBQ92521 554 aa13.49□□□□□ -0.25
TTC39A-213ENST00000524442 KAT6BQ8WYB5 2073 aa13.48□□□□□ -0.25
TTC39A-213ENST00000524442 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
TTC39A-213ENST00000524442 NEFMP07197 916 aa13.47□□□□□ -0.25
TTC39A-213ENST00000524442 CABP4P57796 275 aa13.47□□□□□ -0.25
TTC39A-213ENST00000524442 NUP188Q5SRE5 1749 aa13.46□□□□□ -0.25
TTC39A-213ENST00000524442 TOGARAM1Q9Y4F4 1720 aa13.46□□□□□ -0.25
TTC39A-213ENST00000524442 PALLDQ8WX93 1383 aa13.45□□□□□ -0.26
TTC39A-213ENST00000524442 GNAT3A8MTJ3 354 aa13.45□□□□□ -0.26
TTC39A-213ENST00000524442 RNMTO43148 476 aaKnown RBP13.45□□□□□ -0.26
TTC39A-213ENST00000524442 ANP32CO43423 234 aa13.45□□□□□ -0.26
TTC39A-213ENST00000524442 PHACTR3Q96KR7 559 aa13.45□□□□□ -0.26
TTC39A-213ENST00000524442 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
TTC39A-213ENST00000524442 CCNL1Q9UK58 526 aaPredicted RBP13.45□□□□□ -0.26
TTC39A-213ENST00000524442 MAP3K5Q99683 1374 aa13.45□□□□□ -0.26
TTC39A-213ENST00000524442 R3HDM1Q15032 1099 aaKnown RBP13.44□□□□□ -0.26
TTC39A-213ENST00000524442 SLC52A2Q9HAB3 445 aa13.44□□□□□ -0.26
TTC39A-213ENST00000524442 LRRC4BQ9NT99 713 aa13.44□□□□□ -0.26
TTC39A-213ENST00000524442 ITGB4P16144 1822 aa13.43□□□□□ -0.26
TTC39A-213ENST00000524442 HTATSF1O43719 755 aaKnown RBP13.43□□□□□ -0.26
TTC39A-213ENST00000524442 LY75O60449 1722 aa13.43□□□□□ -0.26
TTC39A-213ENST00000524442 SLC15A2Q16348 729 aa13.43□□□□□ -0.26
TTC39A-213ENST00000524442 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
TTC39A-213ENST00000524442 PLEKHF1Q96S99 279 aa13.43□□□□□ -0.26
TTC39A-213ENST00000524442 LGR6Q9HBX8 967 aa13.43□□□□□ -0.26
TTC39A-213ENST00000524442 PSDA5PKW4 1024 aaPredicted RBP13.42□□□□□ -0.26
TTC39A-213ENST00000524442 WDR43Q15061 677 aaKnown RBP eCLIP13.42□□□□□ -0.26
TTC39A-213ENST00000524442 ANO8Q9HCE9 1232 aaPredicted RBP13.42□□□□□ -0.26
TTC39A-213ENST00000524442 ATG3Q9NT62 314 aa13.42□□□□□ -0.26
TTC39A-213ENST00000524442 ASAP1Q9ULH1 1129 aa13.42□□□□□ -0.26
TTC39A-213ENST00000524442 MRC1P22897 1456 aa13.42□□□□□ -0.26
TTC39A-213ENST00000524442 MAPK8IP3Q9UPT6 1336 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms