RNA–Protein interactions for RNA: ENST00000524429.2

NECTIN1-204, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 2

Gene NECTIN1, Length 777 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-204ENST00000524429 PPIP5K1Q6PFW1 1433 aa10.97□□□□□ -0.65
NECTIN1-204ENST00000524429 COL16A1Q07092 1604 aaPredicted RBP10.97□□□□□ -0.65
NECTIN1-204ENST00000524429 MSH6P52701 1360 aa10.96□□□□□ -0.65
NECTIN1-204ENST00000524429 PER1O15534 1290 aaPredicted RBP10.96□□□□□ -0.65
NECTIN1-204ENST00000524429 FBXO22Q8NEZ5 403 aa10.96□□□□□ -0.65
NECTIN1-204ENST00000524429 C19orf44Q9H6X5 657 aa10.96□□□□□ -0.65
NECTIN1-204ENST00000524429 POLR3AO14802 1390 aaPredicted RBP10.95□□□□□ -0.66
NECTIN1-204ENST00000524429 PRR36Q9H6K5 1346 aa10.95□□□□□ -0.66
NECTIN1-204ENST00000524429 PODXL2Q9NZ53 605 aa10.95□□□□□ -0.66
NECTIN1-204ENST00000524429 CDK12Q9NYV4 1490 aaPredicted RBP10.94□□□□□ -0.66
NECTIN1-204ENST00000524429 MST1RQ04912 1400 aa10.94□□□□□ -0.66
NECTIN1-204ENST00000524429 A0A1W2PP64 1363 aa10.94□□□□□ -0.66
NECTIN1-204ENST00000524429 BRD4O60885 1362 aaPredicted RBP10.94□□□□□ -0.66
NECTIN1-204ENST00000524429 NSD2O96028 1365 aa10.94□□□□□ -0.66
NECTIN1-204ENST00000524429 PLEKHG3A1L390 1219 aa10.94□□□□□ -0.66
NECTIN1-204ENST00000524429 NUDT16Q96DE0 195 aaKnown RBP10.94□□□□□ -0.66
NECTIN1-204ENST00000524429 TERF2IPQ9NYB0 399 aa10.94□□□□□ -0.66
NECTIN1-204ENST00000524429 TRPM3Q9HCF6 1732 aaPredicted RBP10.94□□□□□ -0.66
NECTIN1-204ENST00000524429 EDC4Q6P2E9 1401 aaKnown RBP10.93□□□□□ -0.66
NECTIN1-204ENST00000524429 MARF1Q9Y4F3 1742 aaKnown RBP10.93□□□□□ -0.66
NECTIN1-204ENST00000524429 POLR3GLQ9BT43 218 aa10.93□□□□□ -0.66
NECTIN1-204ENST00000524429 PANK3Q9H999 370 aa10.93□□□□□ -0.66
NECTIN1-204ENST00000524429 C1orf167Q5SNV9 1468 aa10.93□□□□□ -0.66
NECTIN1-204ENST00000524429 NHSL1Q5SYE7 1610 aa10.92□□□□□ -0.66
NECTIN1-204ENST00000524429 SLC12A5Q9H2X9 1139 aa10.92□□□□□ -0.66
NECTIN1-204ENST00000524429 NSD3Q9BZ95 1437 aa10.92□□□□□ -0.66
NECTIN1-204ENST00000524429 PIK3C2AO00443 1686 aa10.92□□□□□ -0.66
NECTIN1-204ENST00000524429 PARD3Q8TEW0 1356 aa10.91□□□□□ -0.66
NECTIN1-204ENST00000524429 NUTM2BA6NNL0 878 aaPredicted RBP10.91□□□□□ -0.66
NECTIN1-204ENST00000524429 NUTM2EB1AL46 878 aaPredicted RBP10.91□□□□□ -0.66
NECTIN1-204ENST00000524429 CADPS2Q86UW7 1296 aa10.91□□□□□ -0.66
NECTIN1-204ENST00000524429 NUTM2AQ8IVF1 878 aaPredicted RBP10.91□□□□□ -0.66
NECTIN1-204ENST00000524429 SLC24A3Q9HC58 644 aa10.91□□□□□ -0.66
NECTIN1-204ENST00000524429 ALS2Q96Q42 1657 aa10.91□□□□□ -0.66
NECTIN1-204ENST00000524429 RGS12O14924 1447 aa10.91□□□□□ -0.66
NECTIN1-204ENST00000524429 USP6P35125 1406 aa10.91□□□□□ -0.66
NECTIN1-204ENST00000524429 SSH2Q76I76 1423 aa10.91□□□□□ -0.66
NECTIN1-204ENST00000524429 AFF2P51816 1311 aa10.9□□□□□ -0.66
NECTIN1-204ENST00000524429 SHPRHQ149N8 1683 aa10.9□□□□□ -0.66
NECTIN1-204ENST00000524429 NUDT7P0C024 238 aa10.9□□□□□ -0.66
NECTIN1-204ENST00000524429 HDGFL2Q7Z4V5 671 aaPredicted RBP10.9□□□□□ -0.66
NECTIN1-204ENST00000524429 TMC1Q8TDI8 760 aa10.9□□□□□ -0.66
NECTIN1-204ENST00000524429 MFRPQ9BY79 579 aa10.9□□□□□ -0.66
NECTIN1-204ENST00000524429 CABP1Q9NZU7 370 aa10.9□□□□□ -0.66
NECTIN1-204ENST00000524429 AXIN2Q9Y2T1 843 aa10.9□□□□□ -0.66
NECTIN1-204ENST00000524429 KNSTRNQ9Y448 316 aa10.9□□□□□ -0.66
NECTIN1-204ENST00000524429 MAP2P11137 1827 aaKnown RBP10.9□□□□□ -0.66
NECTIN1-204ENST00000524429 CGNL1Q0VF96 1302 aa10.89□□□□□ -0.67
NECTIN1-204ENST00000524429 ANP32CO43423 234 aa10.89□□□□□ -0.67
NECTIN1-204ENST00000524429 ATF3P18847 181 aa10.89□□□□□ -0.67
NECTIN1-204ENST00000524429 SMYD5Q6GMV2 418 aa10.89□□□□□ -0.67
NECTIN1-204ENST00000524429 CARD14Q9BXL6 1004 aa10.89□□□□□ -0.67
NECTIN1-204ENST00000524429 PRKRIP1Q9H875 184 aaPredicted RBP10.89□□□□□ -0.67
NECTIN1-204ENST00000524429 PLA2G2EQ9NZK7 142 aa10.89□□□□□ -0.67
NECTIN1-204ENST00000524429 AHDC1Q5TGY3 1603 aaPredicted RBP10.88□□□□□ -0.67
NECTIN1-204ENST00000524429 PBX2P40425 430 aa10.88□□□□□ -0.67
NECTIN1-204ENST00000524429 RALBP1Q15311 655 aa10.88□□□□□ -0.67
NECTIN1-204ENST00000524429 ACEP12821 1306 aa10.87□□□□□ -0.67
NECTIN1-204ENST00000524429 CRYBG1Q9Y4K1 1723 aa10.87□□□□□ -0.67
NECTIN1-204ENST00000524429 C2orf72A6NCS6 295 aa10.87□□□□□ -0.67
NECTIN1-204ENST00000524429 E2F4Q16254 413 aa10.87□□□□□ -0.67
NECTIN1-204ENST00000524429 PHRF1Q9P1Y6 1649 aaKnown RBP10.87□□□□□ -0.67
NECTIN1-204ENST00000524429 TTC21AQ8NDW8 1320 aa10.86□□□□□ -0.67
NECTIN1-204ENST00000524429 RBM6P78332 1123 aaKnown RBP10.86□□□□□ -0.67
NECTIN1-204ENST00000524429 TMC2Q8TDI7 906 aa10.86□□□□□ -0.67
NECTIN1-204ENST00000524429 QTRT2Q9H974 415 aaKnown RBP10.86□□□□□ -0.67
NECTIN1-204ENST00000524429 TESPA1A2RU30 521 aaPredicted RBP10.85□□□□□ -0.67
NECTIN1-204ENST00000524429 CCER2I3L3R5 266 aa10.85□□□□□ -0.67
NECTIN1-204ENST00000524429 KIF3CO14782 793 aa10.85□□□□□ -0.67
NECTIN1-204ENST00000524429 POTEEQ6S8J3 1075 aa10.85□□□□□ -0.67
NECTIN1-204ENST00000524429 LHX6Q9UPM6 363 aa10.85□□□□□ -0.67
NECTIN1-204ENST00000524429 PXDNQ92626 1479 aa10.85□□□□□ -0.67
NECTIN1-204ENST00000524429 LTN1O94822 1766 aa10.85□□□□□ -0.67
NECTIN1-204ENST00000524429 OVOS2A0A0J9YW53 1432 aa10.84□□□□□ -0.67
NECTIN1-204ENST00000524429 OVOS2Q6IE36 1432 aa10.84□□□□□ -0.67
NECTIN1-204ENST00000524429 C8orf37Q96NL8 207 aa10.84□□□□□ -0.67
NECTIN1-204ENST00000524429 USP31Q70CQ4 1352 aa10.84□□□□□ -0.67
NECTIN1-204ENST00000524429 ABCA3Q99758 1704 aa10.84□□□□□ -0.67
NECTIN1-204ENST00000524429 MYBBP1AQ9BQG0 1328 aaKnown RBP10.84□□□□□ -0.67
NECTIN1-204ENST00000524429 BRINP3Q76B58 766 aa10.83□□□□□ -0.68
NECTIN1-204ENST00000524429 HCSTQ9UBK5 93 aa10.83□□□□□ -0.68
NECTIN1-204ENST00000524429 SMG6Q86US8 1419 aaKnown RBP10.83□□□□□ -0.68
NECTIN1-204ENST00000524429 TTC21BQ7Z4L5 1316 aa10.83□□□□□ -0.68
NECTIN1-204ENST00000524429 SBNO1A3KN83 1393 aa10.82□□□□□ -0.68
NECTIN1-204ENST00000524429 NUTM2FA1L443 756 aa10.82□□□□□ -0.68
NECTIN1-204ENST00000524429 FYB1O15117 783 aa10.82□□□□□ -0.68
NECTIN1-204ENST00000524429 ZMYND10O75800 440 aa10.82□□□□□ -0.68
NECTIN1-204ENST00000524429 SLC34A2O95436 690 aa10.82□□□□□ -0.68
NECTIN1-204ENST00000524429 ESCO1Q5FWF5 840 aa10.82□□□□□ -0.68
NECTIN1-204ENST00000524429 NGDNQ8NEJ9 315 aaKnown RBP10.82□□□□□ -0.68
NECTIN1-204ENST00000524429 PCDHGA4Q9Y5G9 962 aa10.82□□□□□ -0.68
NECTIN1-204ENST00000524429 NPHP3Q7Z494 1330 aa10.82□□□□□ -0.68
NECTIN1-204ENST00000524429 AATKQ6ZMQ8 1374 aa10.81□□□□□ -0.68
NECTIN1-204ENST00000524429 COL22A1Q8NFW1 1626 aaPredicted RBP10.81□□□□□ -0.68
NECTIN1-204ENST00000524429 SLIT3O75094 1523 aa10.81□□□□□ -0.68
NECTIN1-204ENST00000524429 ZMYND15Q9H091 742 aa10.81□□□□□ -0.68
NECTIN1-204ENST00000524429 SEMA3EO15041 775 aa10.8□□□□□ -0.68
NECTIN1-204ENST00000524429 NLRP13Q86W25 1043 aa10.8□□□□□ -0.68
NECTIN1-204ENST00000524429 PMFBP1Q8TBY8 1022 aa10.8□□□□□ -0.68
NECTIN1-204ENST00000524429 ORAI2Q96SN7 254 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms