RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
CLN8-207ENST00000524258 KDRP35968 1356 aa16.22■□□□□ 0.19
CLN8-207ENST00000524258 TNS1Q9HBL0 1735 aaKnown RBP16.22■□□□□ 0.19
CLN8-207ENST00000524258 CYP27B1O15528 508 aa16.21■□□□□ 0.19
CLN8-207ENST00000524258 KCNQ2O43526 872 aa16.21■□□□□ 0.19
CLN8-207ENST00000524258 AEBP1Q8IUX7 1158 aa16.21■□□□□ 0.19
CLN8-207ENST00000524258 CAMKK2Q96RR4 588 aa16.21■□□□□ 0.19
CLN8-207ENST00000524258 SBF2Q86WG5 1849 aa16.2■□□□□ 0.18
CLN8-207ENST00000524258 DDX54Q8TDD1 881 aaKnown RBP16.2■□□□□ 0.18
CLN8-207ENST00000524258 BCL11BQ9C0K0 894 aaPredicted RBP16.2■□□□□ 0.18
CLN8-207ENST00000524258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.2■□□□□ 0.18
CLN8-207ENST00000524258 PLEKHG2Q9H7P9 1386 aa16.2■□□□□ 0.18
CLN8-207ENST00000524258 EN1Q05925 392 aaPredicted RBP16.18■□□□□ 0.18
CLN8-207ENST00000524258 PKD1L3Q7Z443 1732 aa16.17■□□□□ 0.18
CLN8-207ENST00000524258 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
CLN8-207ENST00000524258 DIAPH1O60610 1272 aaKnown RBP16.17■□□□□ 0.18
CLN8-207ENST00000524258 APBA3O96018 575 aa16.17■□□□□ 0.18
CLN8-207ENST00000524258 BAG6P46379 1132 aa16.17■□□□□ 0.18
CLN8-207ENST00000524258 NKX1-1Q15270 411 aaPredicted RBP16.17■□□□□ 0.18
CLN8-207ENST00000524258 PLSCR1O15162 318 aa16.16■□□□□ 0.18
CLN8-207ENST00000524258 SF3B2Q13435 895 aaKnown RBP16.16■□□□□ 0.18
CLN8-207ENST00000524258 EZH2Q15910 746 aaKnown RBP16.16■□□□□ 0.18
CLN8-207ENST00000524258 SULT6B1Q6IMI4 303 aa16.16■□□□□ 0.18
CLN8-207ENST00000524258 PROM2Q8N271 834 aa16.16■□□□□ 0.18
CLN8-207ENST00000524258 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
CLN8-207ENST00000524258 PCDH11XQ9BZA7 1347 aa16.15■□□□□ 0.18
CLN8-207ENST00000524258 PCDH11YQ9BZA8 1340 aa16.15■□□□□ 0.18
CLN8-207ENST00000524258 NHSQ6T4R5 1651 aa16.14■□□□□ 0.17
CLN8-207ENST00000524258 PHKG2P15735 406 aa16.13■□□□□ 0.17
CLN8-207ENST00000524258 PRIM1P49642 420 aaKnown RBP16.13■□□□□ 0.17
CLN8-207ENST00000524258 RALBP1Q15311 655 aa16.13■□□□□ 0.17
CLN8-207ENST00000524258 SPG7Q9UQ90 795 aa16.13■□□□□ 0.17
CLN8-207ENST00000524258 HMOX1P09601 288 aa16.12■□□□□ 0.17
CLN8-207ENST00000524258 AMOTQ4VCS5 1084 aa16.1■□□□□ 0.17
CLN8-207ENST00000524258 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
CLN8-207ENST00000524258 IFNL2Q8IZJ0 200 aa16.1■□□□□ 0.17
CLN8-207ENST00000524258 PRKRIP1Q9H875 184 aaPredicted RBP16.1■□□□□ 0.17
CLN8-207ENST00000524258 CFAP53Q96M91 514 aa16.09■□□□□ 0.17
CLN8-207ENST00000524258 RREB1Q92766 1687 aa16.08■□□□□ 0.17
CLN8-207ENST00000524258 TOGARAM1Q9Y4F4 1720 aa16.08■□□□□ 0.17
CLN8-207ENST00000524258 RSPH6AQ9H0K4 717 aa16.08■□□□□ 0.16
CLN8-207ENST00000524258 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.16
CLN8-207ENST00000524258 RGPD3A6NKT7 1758 aaPredicted RBP16.08■□□□□ 0.16
CLN8-207ENST00000524258 RGPD4Q7Z3J3 1758 aa16.08■□□□□ 0.16
CLN8-207ENST00000524258 U2SURPO15042 1029 aaKnown RBP16.07■□□□□ 0.16
CLN8-207ENST00000524258 ZNF530Q6P9A1 599 aaPredicted RBP16.07■□□□□ 0.16
CLN8-207ENST00000524258 KDM6AO15550 1401 aaPredicted RBP16.07■□□□□ 0.16
CLN8-207ENST00000524258 BTAF1O14981 1849 aa16.07■□□□□ 0.16
CLN8-207ENST00000524258 MYBBP1AQ9BQG0 1328 aaKnown RBP16.06■□□□□ 0.16
CLN8-207ENST00000524258 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
CLN8-207ENST00000524258 MTHFSDQ2M296 383 aaKnown RBP16.06■□□□□ 0.16
CLN8-207ENST00000524258 PIGBQ92521 554 aa16.06■□□□□ 0.16
CLN8-207ENST00000524258 PHACTR3Q96KR7 559 aa16.06■□□□□ 0.16
CLN8-207ENST00000524258 LRRC4BQ9NT99 713 aa16.06■□□□□ 0.16
CLN8-207ENST00000524258 SRCAPQ6ZRS2 3230 aa16.05■□□□□ 0.16
CLN8-207ENST00000524258 SYTL4Q96C24 671 aaPredicted RBP16.04■□□□□ 0.16
CLN8-207ENST00000524258 DCAF5Q96JK2 942 aa16.04■□□□□ 0.16
CLN8-207ENST00000524258 ANO8Q9HCE9 1232 aaPredicted RBP16.04■□□□□ 0.16
CLN8-207ENST00000524258 NUDCQ9Y266 331 aa16.04■□□□□ 0.16
CLN8-207ENST00000524258 NUP188Q5SRE5 1749 aa16.04■□□□□ 0.16
CLN8-207ENST00000524258 KAT6BQ8WYB5 2073 aa16.04■□□□□ 0.16
CLN8-207ENST00000524258 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
CLN8-207ENST00000524258 FCHSD2O94868 740 aa16.03■□□□□ 0.16
CLN8-207ENST00000524258 AKAP4Q5JQC9 854 aa16.03■□□□□ 0.16
CLN8-207ENST00000524258 HSP90AB1P08238 724 aaKnown RBP16.02■□□□□ 0.16
CLN8-207ENST00000524258 U2AF1L5P0DN76 240 aaPredicted RBP16.02■□□□□ 0.16
CLN8-207ENST00000524258 PRKAR2BP31323 418 aa16.02■□□□□ 0.16
CLN8-207ENST00000524258 U2AF1Q01081 240 aaKnown RBP eCLIP16.02■□□□□ 0.16
CLN8-207ENST00000524258 MPRIPQ6WCQ1 1025 aa16.02■□□□□ 0.16
CLN8-207ENST00000524258 PLEKHF1Q96S99 279 aa16.02■□□□□ 0.16
CLN8-207ENST00000524258 LGR6Q9HBX8 967 aa16.02■□□□□ 0.16
CLN8-207ENST00000524258 ITGB4P16144 1822 aa16.01■□□□□ 0.15
CLN8-207ENST00000524258 ADAMTS7Q9UKP4 1686 aa16■□□□□ 0.15
CLN8-207ENST00000524258 RNMTO43148 476 aaKnown RBP16■□□□□ 0.15
CLN8-207ENST00000524258 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
CLN8-207ENST00000524258 PAPPAQ13219 1627 aa16■□□□□ 0.15
CLN8-207ENST00000524258 KCNQ4P56696 695 aa15.99■□□□□ 0.15
CLN8-207ENST00000524258 C1orf141Q5JVX7 400 aa15.99■□□□□ 0.15
CLN8-207ENST00000524258 ATG3Q9NT62 314 aa15.99■□□□□ 0.15
CLN8-207ENST00000524258 PSDA5PKW4 1024 aaPredicted RBP15.98■□□□□ 0.15
CLN8-207ENST00000524258 LY75O60449 1722 aa15.98■□□□□ 0.15
CLN8-207ENST00000524258 R3HDM1Q15032 1099 aaKnown RBP15.98■□□□□ 0.15
CLN8-207ENST00000524258 SLC27A3Q5K4L6 730 aa15.98■□□□□ 0.15
CLN8-207ENST00000524258 IL17REQ8NFR9 667 aa15.98■□□□□ 0.15
CLN8-207ENST00000524258 TMOD3Q9NYL9 352 aa15.98■□□□□ 0.15
CLN8-207ENST00000524258 PALLDQ8WX93 1383 aa15.98■□□□□ 0.15
CLN8-207ENST00000524258 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
CLN8-207ENST00000524258 GAS2L2Q8NHY3 880 aa15.97■□□□□ 0.15
CLN8-207ENST00000524258 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
CLN8-207ENST00000524258 SLC4A9Q96Q91 983 aa15.97■□□□□ 0.15
CLN8-207ENST00000524258 MRC1P22897 1456 aa15.97■□□□□ 0.15
CLN8-207ENST00000524258 ZNF827Q17R98 1081 aa15.96■□□□□ 0.15
CLN8-207ENST00000524258 NFATC2IPQ8NCF5 419 aa15.96■□□□□ 0.15
CLN8-207ENST00000524258 SMARCC1Q92922 1105 aaPredicted RBP15.96■□□□□ 0.15
CLN8-207ENST00000524258 SLC52A2Q9HAB3 445 aa15.96■□□□□ 0.15
CLN8-207ENST00000524258 CEMIPQ8WUJ3 1361 aa15.96■□□□□ 0.15
CLN8-207ENST00000524258 SCN11AQ9UI33 1791 aa15.95■□□□□ 0.14
CLN8-207ENST00000524258 CABP4P57796 275 aa15.95■□□□□ 0.14
CLN8-207ENST00000524258 SLC15A2Q16348 729 aa15.95■□□□□ 0.14
CLN8-207ENST00000524258 NBPF14Q5TI25 921 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms