RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 KNSTRNQ9Y448 316 aa26.26■■□□□ 1.79
FBXO28-205ENST00000523990 TNNT2P45379 298 aaPredicted RBP26.25■■□□□ 1.79
FBXO28-205ENST00000523990 PLSCR1O15162 318 aa26.23■■□□□ 1.79
FBXO28-205ENST00000523990 AMER1Q5JTC6 1135 aaPredicted RBP26.22■■□□□ 1.79
FBXO28-205ENST00000523990 LRP5O75197 1615 aa26.21■■□□□ 1.79
FBXO28-205ENST00000523990 PSDA5PKW4 1024 aaPredicted RBP26.21■■□□□ 1.79
FBXO28-205ENST00000523990 KCNQ2O43526 872 aa26.21■■□□□ 1.79
FBXO28-205ENST00000523990 DDX54Q8TDD1 881 aaKnown RBP26.21■■□□□ 1.79
FBXO28-205ENST00000523990 RAPGEF4Q8WZA2 1011 aa26.21■■□□□ 1.79
FBXO28-205ENST00000523990 MORC1Q86VD1 984 aa26.2■■□□□ 1.78
FBXO28-205ENST00000523990 ZCRB1Q8TBF4 217 aaKnown RBP26.2■■□□□ 1.78
FBXO28-205ENST00000523990 ACSBG1Q96GR2 724 aa26.2■■□□□ 1.78
FBXO28-205ENST00000523990 PER1O15534 1290 aaPredicted RBP26.18■■□□□ 1.78
FBXO28-205ENST00000523990 TATP17735 454 aaPredicted RBP26.17■■□□□ 1.78
FBXO28-205ENST00000523990 TOGARAM1Q9Y4F4 1720 aa26.17■■□□□ 1.78
FBXO28-205ENST00000523990 R3HDM1Q15032 1099 aaKnown RBP26.16■■□□□ 1.78
FBXO28-205ENST00000523990 EIF4A2Q14240 407 aaKnown RBP26.15■■□□□ 1.78
FBXO28-205ENST00000523990 EYA1Q99502 592 aa26.15■■□□□ 1.78
FBXO28-205ENST00000523990 LY75O60449 1722 aa26.14■■□□□ 1.78
FBXO28-205ENST00000523990 PAPPAQ13219 1627 aa26.13■■□□□ 1.77
FBXO28-205ENST00000523990 ITGB4P16144 1822 aa26.13■■□□□ 1.77
FBXO28-205ENST00000523990 PROM2Q8N271 834 aa26.13■■□□□ 1.77
FBXO28-205ENST00000523990 PCDH11XQ9BZA7 1347 aa26.12■■□□□ 1.77
FBXO28-205ENST00000523990 PCDH11YQ9BZA8 1340 aa26.12■■□□□ 1.77
FBXO28-205ENST00000523990 NPC1L1Q9UHC9 1359 aa26.1■■□□□ 1.77
FBXO28-205ENST00000523990 CASZ1Q86V15 1759 aa26.1■■□□□ 1.77
FBXO28-205ENST00000523990 NBPF14Q5TI25 921 aa26.1■■□□□ 1.77
FBXO28-205ENST00000523990 IGSF1Q8N6C5 1336 aa26.1■■□□□ 1.77
FBXO28-205ENST00000523990 TXNRD1Q16881 649 aa26.09■■□□□ 1.77
FBXO28-205ENST00000523990 PLEKHG2Q9H7P9 1386 aa26.08■■□□□ 1.77
FBXO28-205ENST00000523990 CC2D1BQ5T0F9 858 aaKnown RBP26.07■■□□□ 1.76
FBXO28-205ENST00000523990 ANO8Q9HCE9 1232 aaPredicted RBP26.07■■□□□ 1.76
FBXO28-205ENST00000523990 CYP27B1O15528 508 aa26.06■■□□□ 1.76
FBXO28-205ENST00000523990 PRIM1P49642 420 aaKnown RBP26.05■■□□□ 1.76
FBXO28-205ENST00000523990 SYTL4Q96C24 671 aaPredicted RBP26.05■■□□□ 1.76
FBXO28-205ENST00000523990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.03■■□□□ 1.766e-7■■□□□ 12.6
FBXO28-205ENST00000523990 SPG7Q9UQ90 795 aa26.02■■□□□ 1.76
FBXO28-205ENST00000523990 QSER1Q2KHR3 1735 aa26.02■■□□□ 1.76
FBXO28-205ENST00000523990 TUBGCP6Q96RT7 1819 aa26.01■■□□□ 1.75
FBXO28-205ENST00000523990 MTHFSP49914 203 aa26■■□□□ 1.75
FBXO28-205ENST00000523990 KDRP35968 1356 aa25.99■■□□□ 1.75
FBXO28-205ENST00000523990 IL13P35225 146 aa25.98■■□□□ 1.75
FBXO28-205ENST00000523990 NKX1-1Q15270 411 aaPredicted RBP25.98■■□□□ 1.75
FBXO28-205ENST00000523990 COL3A1P02461 1466 aaPredicted RBP25.98■■□□□ 1.75
FBXO28-205ENST00000523990 TAF1LQ8IZX4 1826 aa25.98■■□□□ 1.75
FBXO28-205ENST00000523990 LRRC4BQ9NT99 713 aa25.97■■□□□ 1.75
FBXO28-205ENST00000523990 C5P01031 1676 aa25.97■■□□□ 1.75
FBXO28-205ENST00000523990 AEBP1Q8IUX7 1158 aa25.97■■□□□ 1.75
FBXO28-205ENST00000523990 VIRMAQ69YN4 1812 aaKnown RBP25.95■■□□□ 1.75
FBXO28-205ENST00000523990 PHKG2P15735 406 aa25.95■■□□□ 1.74
FBXO28-205ENST00000523990 CNGB1Q14028 1251 aaPredicted RBP25.95■■□□□ 1.74
FBXO28-205ENST00000523990 SLC15A2Q16348 729 aa25.95■■□□□ 1.74
FBXO28-205ENST00000523990 SLC27A3Q5K4L6 730 aa25.95■■□□□ 1.74
FBXO28-205ENST00000523990 IFNL2Q8IZJ0 200 aa25.95■■□□□ 1.74
FBXO28-205ENST00000523990 STK32BQ9NY57 414 aa25.95■■□□□ 1.74
FBXO28-205ENST00000523990 SULT6B1Q6IMI4 303 aa25.92■■□□□ 1.74
FBXO28-205ENST00000523990 MPRIPQ6WCQ1 1025 aa25.91■■□□□ 1.74
FBXO28-205ENST00000523990 PDGFDQ9GZP0 370 aaPredicted RBP25.91■■□□□ 1.74
FBXO28-205ENST00000523990 SCN11AQ9UI33 1791 aa25.91■■□□□ 1.74
FBXO28-205ENST00000523990 ZNF827Q17R98 1081 aa25.9■■□□□ 1.74
FBXO28-205ENST00000523990 PLEKHO1Q53GL0 409 aaPredicted RBP25.89■■□□□ 1.74
FBXO28-205ENST00000523990 PALLDQ8WX93 1383 aa25.89■■□□□ 1.73
FBXO28-205ENST00000523990 DIAPH1O60610 1272 aaKnown RBP25.88■■□□□ 1.73
FBXO28-205ENST00000523990 AMOTQ4VCS5 1084 aa25.88■■□□□ 1.73
FBXO28-205ENST00000523990 KCNQ4P56696 695 aa25.88■■□□□ 1.73
FBXO28-205ENST00000523990 KDM6AO15550 1401 aaPredicted RBP25.87■■□□□ 1.73
FBXO28-205ENST00000523990 PIGBQ92521 554 aa25.87■■□□□ 1.73
FBXO28-205ENST00000523990 AKT1S1Q96B36 256 aa25.87■■□□□ 1.73
FBXO28-205ENST00000523990 CCNL1Q9UK58 526 aaPredicted RBP25.87■■□□□ 1.73
FBXO28-205ENST00000523990 ZNF530Q6P9A1 599 aaPredicted RBP25.86■■□□□ 1.73
FBXO28-205ENST00000523990 SPON1Q9HCB6 807 aa25.85■■□□□ 1.73
FBXO28-205ENST00000523990 C4BP0C0L5 1744 aa25.84■■□□□ 1.73
FBXO28-205ENST00000523990 TMOD3Q9NYL9 352 aa25.84■■□□□ 1.73
FBXO28-205ENST00000523990 COL24A1Q17RW2 1714 aa25.84■■□□□ 1.73
FBXO28-205ENST00000523990 HSP90AB1P08238 724 aaKnown RBP25.83■■□□□ 1.73
FBXO28-205ENST00000523990 HMOX1P09601 288 aa25.83■■□□□ 1.73
FBXO28-205ENST00000523990 ZNF831Q5JPB2 1677 aa25.83■■□□□ 1.72
FBXO28-205ENST00000523990 ADAMTS7Q9UKP4 1686 aa25.83■■□□□ 1.72
FBXO28-205ENST00000523990 SMARCC1Q92922 1105 aaPredicted RBP25.82■■□□□ 1.72
FBXO28-205ENST00000523990 DCAF5Q96JK2 942 aa25.82■■□□□ 1.72
FBXO28-205ENST00000523990 UBR3Q6ZT12 1888 aa25.81■■□□□ 1.72
FBXO28-205ENST00000523990 ZBTB7AO95365 584 aa25.8■■□□□ 1.72
FBXO28-205ENST00000523990 ERVV-2B6SEH9 535 aa25.8■■□□□ 1.72
FBXO28-205ENST00000523990 PPP2R1AP30153 589 aa25.8■■□□□ 1.72
FBXO28-205ENST00000523990 C1orf141Q5JVX7 400 aa25.8■■□□□ 1.72
FBXO28-205ENST00000523990 COL5A3P25940 1745 aaPredicted RBP25.78■■□□□ 1.72
FBXO28-205ENST00000523990 PNPLA7Q6ZV29 1317 aa25.78■■□□□ 1.72
FBXO28-205ENST00000523990 MTFR1LQ9H019 292 aa25.77■■□□□ 1.72
FBXO28-205ENST00000523990 ASAP1Q9ULH1 1129 aa25.77■■□□□ 1.72
FBXO28-205ENST00000523990 MRC1P22897 1456 aa25.76■■□□□ 1.71
FBXO28-205ENST00000523990 CFAP53Q96M91 514 aa25.76■■□□□ 1.71
FBXO28-205ENST00000523990 TFCP2L1Q9NZI6 479 aa25.76■■□□□ 1.71
FBXO28-205ENST00000523990 U2SURPO15042 1029 aaKnown RBP25.75■■□□□ 1.71
FBXO28-205ENST00000523990 PTGER2P43116 358 aa25.75■■□□□ 1.71
FBXO28-205ENST00000523990 AKAP4Q5JQC9 854 aa25.75■■□□□ 1.71
FBXO28-205ENST00000523990 ATG3Q9NT62 314 aa25.75■■□□□ 1.71
FBXO28-205ENST00000523990 LOC102724428A0A0B4J2F2 783 aa25.74■■□□□ 1.71
FBXO28-205ENST00000523990 SIK1P57059 783 aa25.74■■□□□ 1.71
FBXO28-205ENST00000523990 ATF5Q9Y2D1 282 aaPredicted RBP25.74■■□□□ 1.71
FBXO28-205ENST00000523990 CICQ96RK0 1608 aaPredicted RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms