RNA–Protein interactions for RNA: ENST00000523919.5

CSGALNACT1-214, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-214ENST00000523919 ZBTB7CA1YPR0 619 aa12.43□□□□□ -0.42
CSGALNACT1-214ENST00000523919 HTRA3P83110 453 aa12.43□□□□□ -0.42
CSGALNACT1-214ENST00000523919 ACSBG1Q96GR2 724 aa12.42□□□□□ -0.42
CSGALNACT1-214ENST00000523919 USP31Q70CQ4 1352 aa12.42□□□□□ -0.42
CSGALNACT1-214ENST00000523919 EVC2Q86UK5 1308 aa12.41□□□□□ -0.42
CSGALNACT1-214ENST00000523919 HSPA1AP0DMV8 641 aaKnown RBP12.4□□□□□ -0.42
CSGALNACT1-214ENST00000523919 HSPA1BP0DMV9 641 aaKnown RBP12.4□□□□□ -0.42
CSGALNACT1-214ENST00000523919 TTC21BQ7Z4L5 1316 aa12.39□□□□□ -0.43
CSGALNACT1-214ENST00000523919 C16orf71Q8IYS4 520 aaPredicted RBP12.39□□□□□ -0.43
CSGALNACT1-214ENST00000523919 CABP1Q9NZU7 370 aa12.39□□□□□ -0.43
CSGALNACT1-214ENST00000523919 USP47Q96K76 1375 aa12.39□□□□□ -0.43
CSGALNACT1-214ENST00000523919 MSH5O43196 834 aa12.38□□□□□ -0.43
CSGALNACT1-214ENST00000523919 NLRP2Q9NX02 1062 aa12.38□□□□□ -0.43
CSGALNACT1-214ENST00000523919 CCNL1Q9UK58 526 aaPredicted RBP12.38□□□□□ -0.43
CSGALNACT1-214ENST00000523919 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
CSGALNACT1-214ENST00000523919 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
CSGALNACT1-214ENST00000523919 KDM2BQ8NHM5 1336 aa12.37□□□□□ -0.43
CSGALNACT1-214ENST00000523919 TGFB2P61812 414 aa12.36□□□□□ -0.43
CSGALNACT1-214ENST00000523919 NMRK2Q9NPI5 230 aa12.36□□□□□ -0.43
CSGALNACT1-214ENST00000523919 C5P01031 1676 aa12.35□□□□□ -0.43
CSGALNACT1-214ENST00000523919 NSD2O96028 1365 aa12.35□□□□□ -0.43
CSGALNACT1-214ENST00000523919 COL23A1Q86Y22 540 aaPredicted RBP12.35□□□□□ -0.43
CSGALNACT1-214ENST00000523919 LTN1O94822 1766 aa12.35□□□□□ -0.43
CSGALNACT1-214ENST00000523919 IGSF1Q8N6C5 1336 aa12.35□□□□□ -0.43
CSGALNACT1-214ENST00000523919 MSL1Q68DK7 614 aa12.34□□□□□ -0.43
CSGALNACT1-214ENST00000523919 SMARCC1Q92922 1105 aaPredicted RBP12.34□□□□□ -0.43
CSGALNACT1-214ENST00000523919 KIF13BQ9NQT8 1826 aa12.34□□□□□ -0.43
CSGALNACT1-214ENST00000523919 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
CSGALNACT1-214ENST00000523919 SSFA2P28290 1259 aa12.33□□□□□ -0.44
CSGALNACT1-214ENST00000523919 FAM161AQ3B820 660 aa12.33□□□□□ -0.44
CSGALNACT1-214ENST00000523919 CABP2Q9NPB3 220 aa12.33□□□□□ -0.44
CSGALNACT1-214ENST00000523919 DOT1LQ8TEK3 1739 aa12.33□□□□□ -0.44
CSGALNACT1-214ENST00000523919 TAF1LQ8IZX4 1826 aa12.32□□□□□ -0.44
CSGALNACT1-214ENST00000523919 TNRC6CQ9HCJ0 1690 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-214ENST00000523919 KTN1Q86UP2 1357 aaKnown RBP12.32□□□□□ -0.44
CSGALNACT1-214ENST00000523919 SMC1BQ8NDV3 1235 aa12.32□□□□□ -0.44
CSGALNACT1-214ENST00000523919 ANKRD24Q8TF21 1146 aa12.32□□□□□ -0.44
CSGALNACT1-214ENST00000523919 PXDNLA1KZ92 1463 aa12.32□□□□□ -0.44
CSGALNACT1-214ENST00000523919 SBNO2Q9Y2G9 1366 aa12.31□□□□□ -0.44
CSGALNACT1-214ENST00000523919 PRIM1P49642 420 aaKnown RBP12.31□□□□□ -0.44
CSGALNACT1-214ENST00000523919 ZCRB1Q8TBF4 217 aaKnown RBP12.3□□□□□ -0.44
CSGALNACT1-214ENST00000523919 KCNQ4P56696 695 aa12.29□□□□□ -0.44
CSGALNACT1-214ENST00000523919 IP6K1Q92551 441 aa12.29□□□□□ -0.44
CSGALNACT1-214ENST00000523919 SYTL4Q96C24 671 aaPredicted RBP12.29□□□□□ -0.44
CSGALNACT1-214ENST00000523919 AK7Q96M32 723 aa12.29□□□□□ -0.44
CSGALNACT1-214ENST00000523919 PUS7Q96PZ0 661 aaKnown RBP12.29□□□□□ -0.44
CSGALNACT1-214ENST00000523919 ARFGEF1Q9Y6D6 1849 aa12.29□□□□□ -0.44
CSGALNACT1-214ENST00000523919 UBR3Q6ZT12 1888 aa12.28□□□□□ -0.44
CSGALNACT1-214ENST00000523919 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
CSGALNACT1-214ENST00000523919 DDX54Q8TDD1 881 aaKnown RBP12.28□□□□□ -0.44
CSGALNACT1-214ENST00000523919 RTL1A6NKG5 1358 aa12.28□□□□□ -0.44
CSGALNACT1-214ENST00000523919 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
CSGALNACT1-214ENST00000523919 EDC4Q6P2E9 1401 aaKnown RBP12.28□□□□□ -0.44
CSGALNACT1-214ENST00000523919 ADRA2BP18089 450 aa12.26□□□□□ -0.45
CSGALNACT1-214ENST00000523919 NLGN1Q8N2Q7 840 aa12.26□□□□□ -0.45
CSGALNACT1-214ENST00000523919 PRDM10Q9NQV6 1147 aa12.26□□□□□ -0.45
CSGALNACT1-214ENST00000523919 PCDH11XQ9BZA7 1347 aa12.26□□□□□ -0.45
CSGALNACT1-214ENST00000523919 PCDH11YQ9BZA8 1340 aa12.26□□□□□ -0.45
CSGALNACT1-214ENST00000523919 HDGFL2Q7Z4V5 671 aaPredicted RBP12.25□□□□□ -0.45
CSGALNACT1-214ENST00000523919 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
CSGALNACT1-214ENST00000523919 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
CSGALNACT1-214ENST00000523919 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
CSGALNACT1-214ENST00000523919 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
CSGALNACT1-214ENST00000523919 SMG6Q86US8 1419 aaKnown RBP12.25□□□□□ -0.45
CSGALNACT1-214ENST00000523919 BRCA1P38398 1863 aaKnown RBP12.24□□□□□ -0.45
CSGALNACT1-214ENST00000523919 MLLT1Q03111 559 aaPredicted RBP12.24□□□□□ -0.45
CSGALNACT1-214ENST00000523919 PKD1L3Q7Z443 1732 aa12.24□□□□□ -0.45
CSGALNACT1-214ENST00000523919 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
CSGALNACT1-214ENST00000523919 ZNF831Q5JPB2 1677 aa12.23□□□□□ -0.45
CSGALNACT1-214ENST00000523919 CD163L1Q9NR16 1453 aa12.23□□□□□ -0.45
CSGALNACT1-214ENST00000523919 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
CSGALNACT1-214ENST00000523919 CCDC87Q9NVE4 849 aa12.23□□□□□ -0.45
CSGALNACT1-214ENST00000523919 KCPQ6ZWJ8 1503 aa12.22□□□□□ -0.45
CSGALNACT1-214ENST00000523919 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
CSGALNACT1-214ENST00000523919 SOX12O15370 315 aa12.22□□□□□ -0.45
CSGALNACT1-214ENST00000523919 ARHGAP27Q6ZUM4 889 aa12.22□□□□□ -0.45
CSGALNACT1-214ENST00000523919 PPARGC1BQ86YN6 1023 aaKnown RBP12.21□□□□□ -0.45
CSGALNACT1-214ENST00000523919 RRAGCQ9HB90 399 aa12.21□□□□□ -0.45
CSGALNACT1-214ENST00000523919 BCS1LQ9Y276 419 aa12.21□□□□□ -0.45
CSGALNACT1-214ENST00000523919 VEGFAP15692 232 aaPredicted RBP12.2□□□□□ -0.46
CSGALNACT1-214ENST00000523919 NBPF1Q3BBV0 1214 aa12.2□□□□□ -0.46
CSGALNACT1-214ENST00000523919 KIAA1551Q9HCM1 1747 aa12.2□□□□□ -0.46
CSGALNACT1-214ENST00000523919 FOXN1O15353 648 aa12.19□□□□□ -0.46
CSGALNACT1-214ENST00000523919 C9orf131Q5VYM1 1079 aa12.19□□□□□ -0.46
CSGALNACT1-214ENST00000523919 ABHD8Q96I13 439 aa12.19□□□□□ -0.46
CSGALNACT1-214ENST00000523919 PIM2Q9P1W9 311 aa12.19□□□□□ -0.46
CSGALNACT1-214ENST00000523919 N4BP2Q86UW6 1770 aaPredicted RBP12.19□□□□□ -0.46
CSGALNACT1-214ENST00000523919 TOGARAM1Q9Y4F4 1720 aa12.19□□□□□ -0.46
CSGALNACT1-214ENST00000523919 TATP17735 454 aaPredicted RBP12.18□□□□□ -0.46
CSGALNACT1-214ENST00000523919 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
CSGALNACT1-214ENST00000523919 MAP2P11137 1827 aaKnown RBP12.17□□□□□ -0.46
CSGALNACT1-214ENST00000523919 FCHSD2O94868 740 aa12.17□□□□□ -0.46
CSGALNACT1-214ENST00000523919 MMP10P09238 476 aa12.17□□□□□ -0.46
CSGALNACT1-214ENST00000523919 CTCFP49711 727 aaPredicted RBP12.17□□□□□ -0.46
CSGALNACT1-214ENST00000523919 TMF1P82094 1093 aa12.17□□□□□ -0.46
CSGALNACT1-214ENST00000523919 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
CSGALNACT1-214ENST00000523919 AIDAQ96BJ3 306 aa12.17□□□□□ -0.46
CSGALNACT1-214ENST00000523919 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
CSGALNACT1-214ENST00000523919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.17□□□□□ -0.46
CSGALNACT1-214ENST00000523919 SBF1O95248 1867 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms