RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 CGNQ9P2M7 1197 aaKnown RBP7.97□□□□□ -1.13
SDC2-208ENST00000523877 GABBR1Q9UBS5 961 aa7.97□□□□□ -1.13
SDC2-208ENST00000523877 TMA7Q9Y2S6 64 aaKnown RBP7.97□□□□□ -1.13
SDC2-208ENST00000523877 CCDC189A1A4V9 331 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 GOLGA6L22H0YM25 854 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 KIF5CO60282 957 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 ONECUT3O60422 494 aaPredicted RBP7.96□□□□□ -1.14
SDC2-208ENST00000523877 IBSPP21815 317 aaPredicted RBP7.96□□□□□ -1.14
SDC2-208ENST00000523877 XPCQ01831 940 aaPredicted RBP7.96□□□□□ -1.14
SDC2-208ENST00000523877 PTPROQ16827 1216 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 CCDC73Q6ZRK6 1079 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 DPH6Q7L8W6 267 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 ZSCAN30Q86W11 494 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 DZIP3Q86Y13 1208 aaKnown RBP7.96□□□□□ -1.14
SDC2-208ENST00000523877 CCDC146Q8IYE0 955 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 NAP1L4Q99733 375 aaKnown RBP7.96□□□□□ -1.14
SDC2-208ENST00000523877 C22orf23Q9BZE7 217 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 INO80BQ9C086 356 aaPredicted RBP7.96□□□□□ -1.14
SDC2-208ENST00000523877 IFT122Q9HBG6 1241 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 BRMS1Q9HCU9 246 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 PAXBP1Q9Y5B6 917 aa7.96□□□□□ -1.14
SDC2-208ENST00000523877 RIMBP2O15034 1052 aa7.95□□□□□ -1.14
SDC2-208ENST00000523877 NAT1P18440 290 aa7.95□□□□□ -1.14
SDC2-208ENST00000523877 ATICP31939 592 aa7.95□□□□□ -1.14
SDC2-208ENST00000523877 MAN1A1P33908 653 aa7.95□□□□□ -1.14
SDC2-208ENST00000523877 NOP9Q86U38 636 aaKnown RBP7.95□□□□□ -1.14
SDC2-208ENST00000523877 HSCBQ8IWL3 235 aa7.95□□□□□ -1.14
SDC2-208ENST00000523877 TTC30BQ8N4P2 665 aa7.95□□□□□ -1.14
SDC2-208ENST00000523877 VPS37AQ8NEZ2 397 aa7.95□□□□□ -1.14
SDC2-208ENST00000523877 RNF166Q96A37 237 aaPredicted RBP7.95□□□□□ -1.14
SDC2-208ENST00000523877 CDC5LQ99459 802 aaKnown RBP7.95□□□□□ -1.14
SDC2-208ENST00000523877 CXorf56Q9H5V9 222 aa7.95□□□□□ -1.14
SDC2-208ENST00000523877 MAP3K20Q9NYL2 800 aaKnown RBP7.95□□□□□ -1.14
SDC2-208ENST00000523877 SCINQ9Y6U3 715 aa7.95□□□□□ -1.14
SDC2-208ENST00000523877 IVNS1ABPQ9Y6Y0 642 aa7.95□□□□□ -1.14
SDC2-208ENST00000523877 CCDC66A2RUB6 948 aa7.94□□□□□ -1.14
SDC2-208ENST00000523877 NBPF7P0C2Y1 421 aaPredicted RBP7.94□□□□□ -1.14
SDC2-208ENST00000523877 NLRP6P59044 892 aa7.94□□□□□ -1.14
SDC2-208ENST00000523877 PSME1Q06323 249 aa7.94□□□□□ -1.14
SDC2-208ENST00000523877 IFT88Q13099 833 aa7.94□□□□□ -1.14
SDC2-208ENST00000523877 CT47A1Q5JQC4 288 aaPredicted RBP7.94□□□□□ -1.14
SDC2-208ENST00000523877 LRCH2Q5VUJ6 765 aa7.94□□□□□ -1.14
SDC2-208ENST00000523877 DRC7Q8IY82 874 aa7.94□□□□□ -1.14
SDC2-208ENST00000523877 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
SDC2-208ENST00000523877 JMYQ8N9B5 988 aa7.94□□□□□ -1.14
SDC2-208ENST00000523877 CCDC47Q96A33 483 aaKnown RBP7.94□□□□□ -1.14
SDC2-208ENST00000523877 ZSWIM6Q9HCJ5 1215 aa7.94□□□□□ -1.14
SDC2-208ENST00000523877 CHCHD3Q9NX63 227 aaKnown RBP7.94□□□□□ -1.14
SDC2-208ENST00000523877 UTP6Q9NYH9 597 aaKnown RBP7.94□□□□□ -1.14
SDC2-208ENST00000523877 ODF2LQ9ULJ1 636 aa7.94□□□□□ -1.14
SDC2-208ENST00000523877 GOLGA6L6A8MZA4 724 aa7.93□□□□□ -1.14
SDC2-208ENST00000523877 ESPNB1AK53 854 aa7.93□□□□□ -1.14
SDC2-208ENST00000523877 LARP1BQ659C4 914 aaKnown RBP7.93□□□□□ -1.14
SDC2-208ENST00000523877 CCDC174Q6PII3 467 aa7.93□□□□□ -1.14
SDC2-208ENST00000523877 CATIPQ7Z7H3 387 aa7.93□□□□□ -1.14
SDC2-208ENST00000523877 ZNF687Q8N1G0 1237 aa7.93□□□□□ -1.14
SDC2-208ENST00000523877 POLR3CQ9BUI4 534 aaPredicted RBP7.93□□□□□ -1.14
SDC2-208ENST00000523877 SCRIBQ14160 1630 aa7.92□□□□□ -1.14
SDC2-208ENST00000523877 KCNA2P16389 499 aa7.92□□□□□ -1.14
SDC2-208ENST00000523877 ZSCAN20P17040 1043 aaPredicted RBP7.92□□□□□ -1.14
SDC2-208ENST00000523877 SARNPP82979 210 aaKnown RBP7.92□□□□□ -1.14
SDC2-208ENST00000523877 CCDC184Q52MB2 194 aa7.92□□□□□ -1.14
SDC2-208ENST00000523877 CCDC92Q53HC0 331 aaPredicted RBP7.92□□□□□ -1.14
SDC2-208ENST00000523877 NAALADL2Q58DX5 795 aa7.92□□□□□ -1.14
SDC2-208ENST00000523877 EP400NLQ6ZTU2 488 aa7.92□□□□□ -1.14
SDC2-208ENST00000523877 SAMD3Q8N6K7 520 aa7.92□□□□□ -1.14
SDC2-208ENST00000523877 CEP63Q96MT8 703 aa7.92□□□□□ -1.14
SDC2-208ENST00000523877 RPS6KC1Q96S38 1066 aa7.92□□□□□ -1.14
SDC2-208ENST00000523877 MED4Q9NPJ6 270 aa7.92□□□□□ -1.14
SDC2-208ENST00000523877 SUN2Q9UH99 717 aa7.92□□□□□ -1.14
SDC2-208ENST00000523877 HOXA2O43364 376 aa7.91□□□□□ -1.14
SDC2-208ENST00000523877 GTPBP6O43824 516 aaPredicted RBP7.91□□□□□ -1.14
SDC2-208ENST00000523877 CCDC175P0C221 793 aa7.91□□□□□ -1.14
SDC2-208ENST00000523877 EIF5P55010 431 aaKnown RBP7.91□□□□□ -1.14
SDC2-208ENST00000523877 CCT2P78371 535 aaKnown RBP7.91□□□□□ -1.14
SDC2-208ENST00000523877 ARSIQ5FYB1 569 aa7.91□□□□□ -1.14
SDC2-208ENST00000523877 SWT1Q5T5J6 900 aaKnown RBP7.91□□□□□ -1.14
SDC2-208ENST00000523877 FBXO22Q8NEZ5 403 aa7.91□□□□□ -1.14
SDC2-208ENST00000523877 ENOX1Q8TC92 643 aaKnown RBP7.91□□□□□ -1.14
SDC2-208ENST00000523877 KHSRPQ92945 711 aaKnown RBP eCLIP7.91□□□□□ -1.14
SDC2-208ENST00000523877 KCNB2Q92953 911 aa7.91□□□□□ -1.14
SDC2-208ENST00000523877 RETREG1Q9H6L5 497 aa7.91□□□□□ -1.14
SDC2-208ENST00000523877 NOL7Q9UMY1 257 aaKnown RBP7.91□□□□□ -1.14
SDC2-208ENST00000523877 IL16Q14005 1332 aa7.91□□□□□ -1.14
SDC2-208ENST00000523877 TRDNQ13061 729 aa7.9□□□□□ -1.14
SDC2-208ENST00000523877 CHMP4CQ96CF2 233 aa7.9□□□□□ -1.14
SDC2-208ENST00000523877 IPO9Q96P70 1041 aaKnown RBP7.9□□□□□ -1.14
SDC2-208ENST00000523877 MFRPQ9BY79 579 aa7.9□□□□□ -1.14
SDC2-208ENST00000523877 FAM117AQ9C073 453 aa7.9□□□□□ -1.14
SDC2-208ENST00000523877 RRAGDQ9NQL2 400 aaPredicted RBP7.9□□□□□ -1.14
SDC2-208ENST00000523877 AKAP2Q9Y2D5 859 aa7.9□□□□□ -1.14
SDC2-208ENST00000523877 TIMM44O43615 452 aa7.89□□□□□ -1.15
SDC2-208ENST00000523877 HTATSF1O43719 755 aaKnown RBP7.89□□□□□ -1.15
SDC2-208ENST00000523877 C11orf91Q3C1V1 193 aa7.89□□□□□ -1.15
SDC2-208ENST00000523877 OTUD6AQ7L8S5 288 aa7.89□□□□□ -1.15
SDC2-208ENST00000523877 FILIP1Q7Z7B0 1213 aa7.89□□□□□ -1.15
SDC2-208ENST00000523877 UBE2Q1Q7Z7E8 422 aa7.89□□□□□ -1.15
SDC2-208ENST00000523877 LCA5Q86VQ0 697 aa7.89□□□□□ -1.15
SDC2-208ENST00000523877 LMNTD2Q8IXW0 634 aa7.89□□□□□ -1.15
SDC2-208ENST00000523877 KLHL23Q8NBE8 558 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms