RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 RAPGEF4Q8WZA2 1011 aa17.3■□□□□ 0.36
VEGFA-224ENST00000523873 DIAPH1O60610 1272 aaKnown RBP17.29■□□□□ 0.36
VEGFA-224ENST00000523873 RALBP1Q15311 655 aa17.28■□□□□ 0.36
VEGFA-224ENST00000523873 DDX54Q8TDD1 881 aaKnown RBP17.28■□□□□ 0.36
VEGFA-224ENST00000523873 HMOX1P09601 288 aa17.27■□□□□ 0.36
VEGFA-224ENST00000523873 SULT6B1Q6IMI4 303 aa17.27■□□□□ 0.36
VEGFA-224ENST00000523873 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.36
VEGFA-224ENST00000523873 NHSQ6T4R5 1651 aa17.26■□□□□ 0.35
VEGFA-224ENST00000523873 ITGB4P16144 1822 aa17.26■□□□□ 0.35
VEGFA-224ENST00000523873 U2SURPO15042 1029 aaKnown RBP17.26■□□□□ 0.35
VEGFA-224ENST00000523873 FAM196AQ6ZSG2 479 aa17.26■□□□□ 0.35
VEGFA-224ENST00000523873 CFAP53Q96M91 514 aa17.26■□□□□ 0.35
VEGFA-224ENST00000523873 PRKRIP1Q9H875 184 aaPredicted RBP17.26■□□□□ 0.35
VEGFA-224ENST00000523873 TOGARAM1Q9Y4F4 1720 aa17.26■□□□□ 0.35
VEGFA-224ENST00000523873 TRIM37O94972 964 aa17.25■□□□□ 0.35
VEGFA-224ENST00000523873 BTAF1O14981 1849 aa17.25■□□□□ 0.35
VEGFA-224ENST00000523873 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
VEGFA-224ENST00000523873 PTF1AQ7RTS3 328 aa17.24■□□□□ 0.35
VEGFA-224ENST00000523873 ACSBG1Q96GR2 724 aa17.23■□□□□ 0.35
VEGFA-224ENST00000523873 KDRP35968 1356 aa17.23■□□□□ 0.35
VEGFA-224ENST00000523873 EP400Q96L91 3159 aa17.22■□□□□ 0.35
VEGFA-224ENST00000523873 CYP27B1O15528 508 aa17.21■□□□□ 0.35
VEGFA-224ENST00000523873 DEFB132Q7Z7B7 95 aa17.21■□□□□ 0.35
VEGFA-224ENST00000523873 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.34
VEGFA-224ENST00000523873 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.34
VEGFA-224ENST00000523873 KCNQ2O43526 872 aa17.2■□□□□ 0.34
VEGFA-224ENST00000523873 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
VEGFA-224ENST00000523873 BCL9O00512 1426 aa17.2■□□□□ 0.34
VEGFA-224ENST00000523873 SCN11AQ9UI33 1791 aa17.2■□□□□ 0.34
VEGFA-224ENST00000523873 DLG5Q8TDM6 1919 aa17.19■□□□□ 0.34
VEGFA-224ENST00000523873 NUDCQ9Y266 331 aa17.19■□□□□ 0.34
VEGFA-224ENST00000523873 U2AF1L5P0DN76 240 aaPredicted RBP17.18■□□□□ 0.34
VEGFA-224ENST00000523873 U2AF1Q01081 240 aaKnown RBP eCLIP17.18■□□□□ 0.34
VEGFA-224ENST00000523873 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
VEGFA-224ENST00000523873 PLEKHO1Q53GL0 409 aaPredicted RBP17.18■□□□□ 0.34
VEGFA-224ENST00000523873 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
VEGFA-224ENST00000523873 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.342e-31■□□□□ 9.6
VEGFA-224ENST00000523873 ANP32CO43423 234 aa17.16■□□□□ 0.34
VEGFA-224ENST00000523873 APBA3O96018 575 aa17.16■□□□□ 0.34
VEGFA-224ENST00000523873 PHKG2P15735 406 aa17.16■□□□□ 0.34
VEGFA-224ENST00000523873 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
VEGFA-224ENST00000523873 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-224ENST00000523873 RSPH6AQ9H0K4 717 aa17.16■□□□□ 0.34
VEGFA-224ENST00000523873 RREB1Q92766 1687 aa17.16■□□□□ 0.34
VEGFA-224ENST00000523873 RGPD3A6NKT7 1758 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-224ENST00000523873 RGPD4Q7Z3J3 1758 aa17.15■□□□□ 0.34
VEGFA-224ENST00000523873 EN1Q05925 392 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-224ENST00000523873 CCDC184Q52MB2 194 aa17.15■□□□□ 0.34
VEGFA-224ENST00000523873 SYTL4Q96C24 671 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-224ENST00000523873 BCL11BQ9C0K0 894 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-224ENST00000523873 NUP188Q5SRE5 1749 aa17.15■□□□□ 0.34
VEGFA-224ENST00000523873 PLEKHG2Q9H7P9 1386 aa17.15■□□□□ 0.34
VEGFA-224ENST00000523873 PRIM1P49642 420 aaKnown RBP17.14■□□□□ 0.33
VEGFA-224ENST00000523873 MTHFSDQ2M296 383 aaKnown RBP17.14■□□□□ 0.33
VEGFA-224ENST00000523873 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
VEGFA-224ENST00000523873 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
VEGFA-224ENST00000523873 BAG6P46379 1132 aa17.13■□□□□ 0.33
VEGFA-224ENST00000523873 PHACTR3Q96KR7 559 aa17.13■□□□□ 0.33
VEGFA-224ENST00000523873 LY75O60449 1722 aa17.13■□□□□ 0.33
VEGFA-224ENST00000523873 KDM6AO15550 1401 aaPredicted RBP17.13■□□□□ 0.33
VEGFA-224ENST00000523873 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-224ENST00000523873 EZH2Q15910 746 aaKnown RBP17.12■□□□□ 0.33
VEGFA-224ENST00000523873 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
VEGFA-224ENST00000523873 C1orf141Q5JVX7 400 aa17.1■□□□□ 0.33
VEGFA-224ENST00000523873 MPRIPQ6WCQ1 1025 aa17.1■□□□□ 0.33
VEGFA-224ENST00000523873 FCHSD2O94868 740 aa17.09■□□□□ 0.33
VEGFA-224ENST00000523873 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
VEGFA-224ENST00000523873 SIPA1L3O60292 1781 aaPredicted RBP17.09■□□□□ 0.33
VEGFA-224ENST00000523873 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.32
VEGFA-224ENST00000523873 PLEKHF1Q96S99 279 aa17.07■□□□□ 0.32
VEGFA-224ENST00000523873 TAF1LQ8IZX4 1826 aa17.07■□□□□ 0.32
VEGFA-224ENST00000523873 HSP90AB1P08238 724 aaKnown RBP17.06■□□□□ 0.32
VEGFA-224ENST00000523873 WDR43Q15061 677 aaKnown RBP eCLIP17.06■□□□□ 0.328e-10■□□□□ 9.2
VEGFA-224ENST00000523873 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
VEGFA-224ENST00000523873 GAS2L2Q8NHY3 880 aa17.06■□□□□ 0.32
VEGFA-224ENST00000523873 PIGBQ92521 554 aa17.06■□□□□ 0.32
VEGFA-224ENST00000523873 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
VEGFA-224ENST00000523873 LGR6Q9HBX8 967 aa17.06■□□□□ 0.32
VEGFA-224ENST00000523873 MAP3K5Q99683 1374 aa17.05■□□□□ 0.32
VEGFA-224ENST00000523873 MRS2Q9HD23 443 aa17.05■□□□□ 0.32
VEGFA-224ENST00000523873 TMOD3Q9NYL9 352 aa17.05■□□□□ 0.32
VEGFA-224ENST00000523873 ADAMTS8Q9UP79 889 aa17.05■□□□□ 0.32
VEGFA-224ENST00000523873 PAPPAQ13219 1627 aa17.04■□□□□ 0.32
VEGFA-224ENST00000523873 PLSCR1O15162 318 aa17.04■□□□□ 0.32
VEGFA-224ENST00000523873 RNMTO43148 476 aaKnown RBP17.04■□□□□ 0.32
VEGFA-224ENST00000523873 PROM2Q8N271 834 aa17.04■□□□□ 0.32
VEGFA-224ENST00000523873 KCNQ4P56696 695 aa17.03■□□□□ 0.32
VEGFA-224ENST00000523873 CABP4P57796 275 aa17.03■□□□□ 0.32
VEGFA-224ENST00000523873 TXNRD1Q16881 649 aa17.03■□□□□ 0.32
VEGFA-224ENST00000523873 MRC1P22897 1456 aa17.03■□□□□ 0.32
VEGFA-224ENST00000523873 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
VEGFA-224ENST00000523873 C5P01031 1676 aa17.02■□□□□ 0.32
VEGFA-224ENST00000523873 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.32
VEGFA-224ENST00000523873 ERVV-2B6SEH9 535 aa17.02■□□□□ 0.32
VEGFA-224ENST00000523873 MAPK8IP3Q9UPT6 1336 aa17.01■□□□□ 0.31
VEGFA-224ENST00000523873 NEFMP07197 916 aa17.01■□□□□ 0.31
VEGFA-224ENST00000523873 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
VEGFA-224ENST00000523873 NFATC2IPQ8NCF5 419 aa17.01■□□□□ 0.31
VEGFA-224ENST00000523873 IL17REQ8NFR9 667 aa17.01■□□□□ 0.31
VEGFA-224ENST00000523873 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms