RNA–Protein interactions for RNA: ENST00000523768.5

TNPO1-213, Transcript of transportin 1, humanhuman

TSL 2 BASIC

Gene TNPO1, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-213ENST00000523768 ANKRD44Q8N8A2 993 aa14.12□□□□□ -0.15
TNPO1-213ENST00000523768 NCOA3Q9Y6Q9 1424 aa14.12□□□□□ -0.15
TNPO1-213ENST00000523768 RPAP2Q8IXW5 612 aaPredicted RBP14.12□□□□□ -0.15
TNPO1-213ENST00000523768 ATP10DQ9P241 1426 aa14.12□□□□□ -0.15
TNPO1-213ENST00000523768 RIMS1Q86UR5 1692 aaKnown RBP14.12□□□□□ -0.15
TNPO1-213ENST00000523768 THEMISQ8N1K5 641 aaPredicted RBP14.11□□□□□ -0.15
TNPO1-213ENST00000523768 IGSF1Q8N6C5 1336 aa14.11□□□□□ -0.15
TNPO1-213ENST00000523768 TBC1D9Q6ZT07 1266 aa14.11□□□□□ -0.15
TNPO1-213ENST00000523768 NGDNQ8NEJ9 315 aaKnown RBP14.11□□□□□ -0.15
TNPO1-213ENST00000523768 MTHFSDQ2M296 383 aaKnown RBP14.11□□□□□ -0.15
TNPO1-213ENST00000523768 ANKARQ7Z5J8 1434 aa14.1□□□□□ -0.15
TNPO1-213ENST00000523768 XRN1Q8IZH2 1706 aaKnown RBP14.1□□□□□ -0.15
TNPO1-213ENST00000523768 EIF5BO60841 1220 aaKnown RBP14.1□□□□□ -0.15
TNPO1-213ENST00000523768 PLEKHM2Q8IWE5 1019 aa14.1□□□□□ -0.15
TNPO1-213ENST00000523768 IL27Q8NEV9 243 aa14.1□□□□□ -0.15
TNPO1-213ENST00000523768 RTF1Q92541 710 aaKnown RBP14.1□□□□□ -0.15
TNPO1-213ENST00000523768 KIF2CQ99661 725 aa14.1□□□□□ -0.15
TNPO1-213ENST00000523768 PIK3C2AO00443 1686 aa14.09□□□□□ -0.15
TNPO1-213ENST00000523768 SOX12O15370 315 aa14.09□□□□□ -0.15
TNPO1-213ENST00000523768 CDC45O75419 566 aa14.09□□□□□ -0.15
TNPO1-213ENST00000523768 DDIT3P35638 169 aa14.09□□□□□ -0.15
TNPO1-213ENST00000523768 SPRYD3Q8NCJ5 442 aa14.09□□□□□ -0.15
TNPO1-213ENST00000523768 GAS2L2Q8NHY3 880 aa14.09□□□□□ -0.15
TNPO1-213ENST00000523768 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
TNPO1-213ENST00000523768 HTATSF1O43719 755 aaKnown RBP14.09□□□□□ -0.15
TNPO1-213ENST00000523768 MCM4P33991 863 aa14.09□□□□□ -0.15
TNPO1-213ENST00000523768 CEP85Q6P2H3 762 aa14.09□□□□□ -0.15
TNPO1-213ENST00000523768 EYA1Q99502 592 aa14.09□□□□□ -0.15
TNPO1-213ENST00000523768 RGPD8O14715 1765 aaPredicted RBP14.08□□□□□ -0.15
TNPO1-213ENST00000523768 MSH6P52701 1360 aa14.08□□□□□ -0.15
TNPO1-213ENST00000523768 FOXO3O43524 673 aa14.08□□□□□ -0.16
TNPO1-213ENST00000523768 AMPHP49418 695 aa14.08□□□□□ -0.16
TNPO1-213ENST00000523768 SLC4A2P04920 1241 aa14.08□□□□□ -0.16
TNPO1-213ENST00000523768 GSPT1P15170 499 aaKnown RBP14.08□□□□□ -0.16
TNPO1-213ENST00000523768 CEP170BQ9Y4F5 1589 aaPredicted RBP14.07□□□□□ -0.16
TNPO1-213ENST00000523768 TSPYL4Q9UJ04 414 aa14.07□□□□□ -0.16
TNPO1-213ENST00000523768 FER1L4A9Z1Z3 1794 aa14.07□□□□□ -0.16
TNPO1-213ENST00000523768 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
TNPO1-213ENST00000523768 TTC22Q5TAA0 569 aa14.06□□□□□ -0.16
TNPO1-213ENST00000523768 BRPF3Q9ULD4 1205 aa14.06□□□□□ -0.16
TNPO1-213ENST00000523768 MEIS3Q99687 375 aa14.06□□□□□ -0.16
TNPO1-213ENST00000523768 CIZ1Q9ULV3 898 aaPredicted RBP14.06□□□□□ -0.16
TNPO1-213ENST00000523768 MIS18AQ9NYP9 233 aa14.05□□□□□ -0.16
TNPO1-213ENST00000523768 LRRC37A3O60309 1634 aa14.05□□□□□ -0.16
TNPO1-213ENST00000523768 CCT4P50991 539 aaKnown RBP14.05□□□□□ -0.16
TNPO1-213ENST00000523768 NLRP6P59044 892 aa14.05□□□□□ -0.16
TNPO1-213ENST00000523768 MARF1Q9Y4F3 1742 aaKnown RBP14.04□□□□□ -0.16
TNPO1-213ENST00000523768 NWD1Q149M9 1564 aa14.03□□□□□ -0.16
TNPO1-213ENST00000523768 KCNA6P17658 529 aa14.03□□□□□ -0.16
TNPO1-213ENST00000523768 HOXC9P31274 260 aa14.03□□□□□ -0.16
TNPO1-213ENST00000523768 C16orf71Q8IYS4 520 aaPredicted RBP14.03□□□□□ -0.16
TNPO1-213ENST00000523768 SOS1Q07889 1333 aaPredicted RBP14.03□□□□□ -0.16
TNPO1-213ENST00000523768 HMMRO75330 724 aa14.03□□□□□ -0.16
TNPO1-213ENST00000523768 HSP90AB1P08238 724 aaKnown RBP14.03□□□□□ -0.16
TNPO1-213ENST00000523768 G2E3Q7L622 706 aa14.03□□□□□ -0.16
TNPO1-213ENST00000523768 BABAM1Q9NWV8 329 aa14.02□□□□□ -0.16
TNPO1-213ENST00000523768 GNAT3A8MTJ3 354 aa14.02□□□□□ -0.17
TNPO1-213ENST00000523768 K7ELQ4 463 aaPredicted RBP14.02□□□□□ -0.17
TNPO1-213ENST00000523768 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
TNPO1-213ENST00000523768 DDX11L8A8MPP1 907 aa14.01□□□□□ -0.17
TNPO1-213ENST00000523768 STK31Q9BXU1 1019 aa14.01□□□□□ -0.17
TNPO1-213ENST00000523768 CD2BP2O95400 341 aaKnown RBP14□□□□□ -0.17
TNPO1-213ENST00000523768 CCDC30Q5VVM6 783 aa14□□□□□ -0.17
TNPO1-213ENST00000523768 OTUD7AQ8TE49 926 aaPredicted RBP14□□□□□ -0.17
TNPO1-213ENST00000523768 F6X3S4 739 aa14□□□□□ -0.17
TNPO1-213ENST00000523768 PLPPR3Q6T4P5 718 aa14□□□□□ -0.17
TNPO1-213ENST00000523768 OSBPL3Q9H4L5 887 aa14□□□□□ -0.17
TNPO1-213ENST00000523768 MAP3K5Q99683 1374 aa13.99□□□□□ -0.17
TNPO1-213ENST00000523768 TRAK2O60296 914 aa13.99□□□□□ -0.17
TNPO1-213ENST00000523768 SDSP20132 328 aa13.99□□□□□ -0.17
TNPO1-213ENST00000523768 RAB3GAP1Q15042 981 aa13.99□□□□□ -0.17
TNPO1-213ENST00000523768 SLC4A10Q6U841 1118 aa13.99□□□□□ -0.17
TNPO1-213ENST00000523768 USP26Q9BXU7 913 aa13.99□□□□□ -0.17
TNPO1-213ENST00000523768 SMARCA5O60264 1052 aaPredicted RBP13.99□□□□□ -0.17
TNPO1-213ENST00000523768 GNAI2P04899 355 aa13.99□□□□□ -0.17
TNPO1-213ENST00000523768 RABEP1Q15276 862 aa13.99□□□□□ -0.17
TNPO1-213ENST00000523768 ABTB2Q8N961 1025 aa13.99□□□□□ -0.17
TNPO1-213ENST00000523768 RBM42Q9BTD8 480 aaKnown RBP13.99□□□□□ -0.17
TNPO1-213ENST00000523768 FAM208AQ9UK61 1670 aaKnown RBP13.99□□□□□ -0.17
TNPO1-213ENST00000523768 FLIIQ13045 1269 aa13.98□□□□□ -0.17
TNPO1-213ENST00000523768 IL17REQ8NFR9 667 aa13.98□□□□□ -0.17
TNPO1-213ENST00000523768 TNPO1Q92973 898 aaKnown RBP13.98□□□□□ -0.17
TNPO1-213ENST00000523768 CACNA1FO60840 1977 aa13.98□□□□□ -0.17
TNPO1-213ENST00000523768 FSD2A1L4K1 749 aa13.97□□□□□ -0.17
TNPO1-213ENST00000523768 TAF7Q15545 349 aaPredicted RBP13.97□□□□□ -0.17
TNPO1-213ENST00000523768 CASC1Q6TDU7 716 aa13.97□□□□□ -0.17
TNPO1-213ENST00000523768 GNAI3P08754 354 aa13.97□□□□□ -0.17
TNPO1-213ENST00000523768 NUTM2GQ5VZR2 741 aa13.97□□□□□ -0.17
TNPO1-213ENST00000523768 HSP90AA1P07900 732 aaKnown RBP13.96□□□□□ -0.17
TNPO1-213ENST00000523768 GBP4Q96PP9 640 aa13.96□□□□□ -0.17
TNPO1-213ENST00000523768 PXDNLA1KZ92 1463 aa13.96□□□□□ -0.18
TNPO1-213ENST00000523768 PDE1AP54750 535 aa13.95□□□□□ -0.18
TNPO1-213ENST00000523768 FKBP5Q13451 457 aaPredicted RBP13.95□□□□□ -0.18
TNPO1-213ENST00000523768 RTN4Q9NQC3 1192 aaKnown RBP13.95□□□□□ -0.18
TNPO1-213ENST00000523768 PHF8Q9UPP1 1060 aa13.95□□□□□ -0.18
TNPO1-213ENST00000523768 APBB1O00213 710 aa13.95□□□□□ -0.18
TNPO1-213ENST00000523768 N4BP2Q86UW6 1770 aaPredicted RBP13.95□□□□□ -0.18
TNPO1-213ENST00000523768 SALL3Q9BXA9 1300 aa13.95□□□□□ -0.18
TNPO1-213ENST00000523768 CHD2O14647 1828 aaKnown RBP13.95□□□□□ -0.18
TNPO1-213ENST00000523768 GOLGA6L3A6NEY3 463 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms