RNA–Protein interactions for RNA: ENST00000523530.1

DENND3-222, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 1,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-222ENST00000523530 TOM1L2Q6ZVM7 507 aa20.89■□□□□ 0.93
DENND3-222ENST00000523530 MCM10Q7L590 875 aa20.89■□□□□ 0.93
DENND3-222ENST00000523530 TSR2Q969E8 191 aaKnown RBP20.89■□□□□ 0.93
DENND3-222ENST00000523530 STRN4Q9NRL3 753 aa20.89■□□□□ 0.93
DENND3-222ENST00000523530 PARP4Q9UKK3 1724 aaKnown RBP20.88■□□□□ 0.93
DENND3-222ENST00000523530 HTATSF1O43719 755 aaKnown RBP20.88■□□□□ 0.93
DENND3-222ENST00000523530 TATP17735 454 aaPredicted RBP20.88■□□□□ 0.93
DENND3-222ENST00000523530 GNAI1P63096 354 aa20.88■□□□□ 0.93
DENND3-222ENST00000523530 IFT57Q9NWB7 429 aa20.87■□□□□ 0.93
DENND3-222ENST00000523530 BTG4Q9NY30 223 aa20.87■□□□□ 0.93
DENND3-222ENST00000523530 VIRMAQ69YN4 1812 aaKnown RBP20.87■□□□□ 0.93
DENND3-222ENST00000523530 JCADQ9P266 1359 aa20.87■□□□□ 0.93
DENND3-222ENST00000523530 LRRC37A3O60309 1634 aa20.87■□□□□ 0.93
DENND3-222ENST00000523530 NUTM2BA6NNL0 878 aaPredicted RBP20.86■□□□□ 0.93
DENND3-222ENST00000523530 NUTM2EB1AL46 878 aaPredicted RBP20.86■□□□□ 0.93
DENND3-222ENST00000523530 FKBP8Q14318 412 aa20.86■□□□□ 0.93
DENND3-222ENST00000523530 NUTM2AQ8IVF1 878 aaPredicted RBP20.86■□□□□ 0.93
DENND3-222ENST00000523530 ADAMTS2O95450 1211 aa20.85■□□□□ 0.93
DENND3-222ENST00000523530 ZNF530Q6P9A1 599 aaPredicted RBP20.85■□□□□ 0.93
DENND3-222ENST00000523530 PKD1L3Q7Z443 1732 aa20.85■□□□□ 0.93
DENND3-222ENST00000523530 MEGF6O75095 1541 aa20.85■□□□□ 0.93
DENND3-222ENST00000523530 CFAP44Q96MT7 982 aa20.85■□□□□ 0.93
DENND3-222ENST00000523530 PLEKHG2Q9H7P9 1386 aa20.84■□□□□ 0.93
DENND3-222ENST00000523530 RNF123Q5XPI4 1314 aa20.84■□□□□ 0.93
DENND3-222ENST00000523530 C1orf141Q5JVX7 400 aa20.84■□□□□ 0.93
DENND3-222ENST00000523530 CRB1P82279 1406 aa20.83■□□□□ 0.93
DENND3-222ENST00000523530 ZNF853P0CG23 659 aa20.83■□□□□ 0.92
DENND3-222ENST00000523530 AKAP4Q5JQC9 854 aa20.83■□□□□ 0.92
DENND3-222ENST00000523530 LARP1Q6PKG0 1096 aaKnown RBP20.83■□□□□ 0.92
DENND3-222ENST00000523530 CARD10Q9BWT7 1032 aa20.83■□□□□ 0.92
DENND3-222ENST00000523530 RRP1P56182 461 aaKnown RBP20.82■□□□□ 0.92
DENND3-222ENST00000523530 EXOSC9Q06265 439 aaKnown RBP20.82■□□□□ 0.92
DENND3-222ENST00000523530 SPG7Q9UQ90 795 aa20.82■□□□□ 0.92
DENND3-222ENST00000523530 NRAPQ86VF7 1730 aa20.82■□□□□ 0.92
DENND3-222ENST00000523530 NWD2Q9ULI1 1742 aa20.82■□□□□ 0.92
DENND3-222ENST00000523530 IRX6P78412 446 aaPredicted RBP20.81■□□□□ 0.92
DENND3-222ENST00000523530 MBIPQ9NS73 344 aa20.81■□□□□ 0.92
DENND3-222ENST00000523530 CT47B1P0C2W7 299 aaPredicted RBP20.8■□□□□ 0.92
DENND3-222ENST00000523530 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.8■□□□□ 0.92
DENND3-222ENST00000523530 OVOS2A0A0G2JMS6 1433 aa20.79■□□□□ 0.92
DENND3-222ENST00000523530 IL17REQ8NFR9 667 aa20.78■□□□□ 0.92
DENND3-222ENST00000523530 CHL1O00533 1208 aa20.77■□□□□ 0.92
DENND3-222ENST00000523530 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.77■□□□□ 0.92
DENND3-222ENST00000523530 SPATA31A6Q5VVP1 1343 aa20.77■□□□□ 0.92
DENND3-222ENST00000523530 WNK3Q9BYP7 1800 aa20.77■□□□□ 0.92
DENND3-222ENST00000523530 SCN11AQ9UI33 1791 aa20.77■□□□□ 0.91
DENND3-222ENST00000523530 IL2RBP14784 551 aa20.76■□□□□ 0.91
DENND3-222ENST00000523530 HSPA1LP34931 641 aa20.76■□□□□ 0.91
DENND3-222ENST00000523530 USP35Q9P2H5 1018 aa20.76■□□□□ 0.91
DENND3-222ENST00000523530 TSPYL4Q9UJ04 414 aa20.76■□□□□ 0.91
DENND3-222ENST00000523530 CEMIPQ8WUJ3 1361 aa20.76■□□□□ 0.91
DENND3-222ENST00000523530 ADAMTS7Q9UKP4 1686 aa20.75■□□□□ 0.91
DENND3-222ENST00000523530 RARSP54136 660 aaKnown RBP20.75■□□□□ 0.91
DENND3-222ENST00000523530 MPRIPQ6WCQ1 1025 aa20.75■□□□□ 0.91
DENND3-222ENST00000523530 IFNL2Q8IZJ0 200 aa20.75■□□□□ 0.91
DENND3-222ENST00000523530 BCAR3O75815 825 aa20.74■□□□□ 0.91
DENND3-222ENST00000523530 TEFQ10587 303 aa20.74■□□□□ 0.91
DENND3-222ENST00000523530 LGR6Q9HBX8 967 aa20.74■□□□□ 0.91
DENND3-222ENST00000523530 SHANK3Q9BYB0 1731 aa20.73■□□□□ 0.91
DENND3-222ENST00000523530 RNMTO43148 476 aaKnown RBP20.73■□□□□ 0.91
DENND3-222ENST00000523530 PLIN1O60240 522 aa20.73■□□□□ 0.91
DENND3-222ENST00000523530 PHKG2P15735 406 aa20.73■□□□□ 0.91
DENND3-222ENST00000523530 TAF7Q15545 349 aaPredicted RBP20.73■□□□□ 0.91
DENND3-222ENST00000523530 SLIT2O94813 1529 aa20.73■□□□□ 0.91
DENND3-222ENST00000523530 SIPA1L3O60292 1781 aaPredicted RBP20.72■□□□□ 0.91
DENND3-222ENST00000523530 ZCRB1Q8TBF4 217 aaKnown RBP20.72■□□□□ 0.91
DENND3-222ENST00000523530 BABAM1Q9NWV8 329 aa20.72■□□□□ 0.91
DENND3-222ENST00000523530 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
DENND3-222ENST00000523530 PCDH11XQ9BZA7 1347 aa20.72■□□□□ 0.91
DENND3-222ENST00000523530 PCDH11YQ9BZA8 1340 aa20.72■□□□□ 0.91
DENND3-222ENST00000523530 KDM3BQ7LBC6 1761 aa20.71■□□□□ 0.91
DENND3-222ENST00000523530 CANXP27824 592 aaKnown RBP20.71■□□□□ 0.91
DENND3-222ENST00000523530 TWISTNBQ3B726 338 aaPredicted RBP20.71■□□□□ 0.91
DENND3-222ENST00000523530 ERICH6BQ5W0A0 696 aa20.71■□□□□ 0.91
DENND3-222ENST00000523530 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
DENND3-222ENST00000523530 C8orf37Q96NL8 207 aa20.71■□□□□ 0.91
DENND3-222ENST00000523530 LRP6O75581 1613 aa20.71■□□□□ 0.91
DENND3-222ENST00000523530 HSP90AB1P08238 724 aaKnown RBP20.7■□□□□ 0.9
DENND3-222ENST00000523530 BCL2L13Q9BXK5 485 aa20.7■□□□□ 0.9
DENND3-222ENST00000523530 ELL2O00472 640 aaPredicted RBP20.69■□□□□ 0.9
DENND3-222ENST00000523530 CYP27B1O15528 508 aa20.69■□□□□ 0.9
DENND3-222ENST00000523530 TSPYL6Q8N831 410 aa20.69■□□□□ 0.9
DENND3-222ENST00000523530 C8orf58Q8NAV2 365 aa20.69■□□□□ 0.9
DENND3-222ENST00000523530 NGLY1Q96IV0 654 aa20.69■□□□□ 0.9
DENND3-222ENST00000523530 SMC4Q9NTJ3 1288 aa20.69■□□□□ 0.9
DENND3-222ENST00000523530 VAMP4O75379 141 aa20.68■□□□□ 0.9
DENND3-222ENST00000523530 KDM6AO15550 1401 aaPredicted RBP20.68■□□□□ 0.9
DENND3-222ENST00000523530 ALDH1L2Q3SY69 923 aa20.68■□□□□ 0.9
DENND3-222ENST00000523530 DCAF5Q96JK2 942 aa20.68■□□□□ 0.9
DENND3-222ENST00000523530 DISP2A7MBM2 1401 aa20.67■□□□□ 0.9
DENND3-222ENST00000523530 MEX3CQ5U5Q3 659 aaKnown RBP20.67■□□□□ 0.9
DENND3-222ENST00000523530 FRAT1Q92837 279 aaPredicted RBP20.67■□□□□ 0.9
DENND3-222ENST00000523530 CCDC9Q9Y3X0 531 aaKnown RBP20.67■□□□□ 0.9
DENND3-222ENST00000523530 SPATA31A1Q5TZJ5 1347 aa20.67■□□□□ 0.9
DENND3-222ENST00000523530 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.66■□□□□ 0.9
DENND3-222ENST00000523530 BTBD11A6QL63 1104 aa20.66■□□□□ 0.9
DENND3-222ENST00000523530 UNC5CLQ8IV45 518 aa20.66■□□□□ 0.9
DENND3-222ENST00000523530 SSH1Q8WYL5 1049 aa20.66■□□□□ 0.9
DENND3-222ENST00000523530 THRAP3Q9Y2W1 955 aaKnown RBP20.66■□□□□ 0.9
DENND3-222ENST00000523530 KRT24Q2M2I5 525 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms