RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 NHSL1Q5SYE7 1610 aa26.77■■□□□ 1.88
SQLE-206ENST00000523430 SOS2Q07890 1332 aaPredicted RBP26.76■■□□□ 1.87
SQLE-206ENST00000523430 LMO7Q8WWI1 1683 aa26.76■■□□□ 1.87
SQLE-206ENST00000523430 RTF1Q92541 710 aaKnown RBP26.76■■□□□ 1.87
SQLE-206ENST00000523430 RLBP1P12271 317 aa26.75■■□□□ 1.87
SQLE-206ENST00000523430 MAP3K5Q99683 1374 aa26.75■■□□□ 1.87
SQLE-206ENST00000523430 COG6Q9Y2V7 657 aa26.74■■□□□ 1.87
SQLE-206ENST00000523430 ERBB3P21860 1342 aa26.74■■□□□ 1.87
SQLE-206ENST00000523430 VAMP4O75379 141 aa26.73■■□□□ 1.87
SQLE-206ENST00000523430 C8orf58Q8NAV2 365 aa26.73■■□□□ 1.87
SQLE-206ENST00000523430 TSHZ2Q9NRE2 1034 aa26.73■■□□□ 1.87
SQLE-206ENST00000523430 ELL2O00472 640 aaPredicted RBP26.72■■□□□ 1.87
SQLE-206ENST00000523430 CHL1O00533 1208 aa26.72■■□□□ 1.87
SQLE-206ENST00000523430 ZKSCAN2Q63HK3 967 aa26.72■■□□□ 1.87
SQLE-206ENST00000523430 ABCC6O95255 1503 aa26.72■■□□□ 1.87
SQLE-206ENST00000523430 ABCA3Q99758 1704 aa26.72■■□□□ 1.87
SQLE-206ENST00000523430 GNAT3A8MTJ3 354 aa26.72■■□□□ 1.87
SQLE-206ENST00000523430 ALDH1L2Q3SY69 923 aa26.72■■□□□ 1.87
SQLE-206ENST00000523430 CLUAP1Q96AJ1 413 aa26.72■■□□□ 1.87
SQLE-206ENST00000523430 TWISTNBQ3B726 338 aaPredicted RBP26.71■■□□□ 1.87
SQLE-206ENST00000523430 KIAA0232Q92628 1395 aa26.7■■□□□ 1.87
SQLE-206ENST00000523430 HTATSF1O43719 755 aaKnown RBP26.7■■□□□ 1.86
SQLE-206ENST00000523430 ZNF428Q96B54 188 aa26.7■■□□□ 1.86
SQLE-206ENST00000523430 CPDO75976 1380 aa26.69■■□□□ 1.86
SQLE-206ENST00000523430 NOB1Q9ULX3 412 aaKnown RBP26.69■■□□□ 1.86
SQLE-206ENST00000523430 LTBP4Q8N2S1 1624 aa26.69■■□□□ 1.86
SQLE-206ENST00000523430 KIF16BQ96L93 1317 aa26.68■■□□□ 1.86
SQLE-206ENST00000523430 TRIM27P14373 513 aa26.68■■□□□ 1.86
SQLE-206ENST00000523430 CHRNA2Q15822 529 aa26.68■■□□□ 1.86
SQLE-206ENST00000523430 KRT24Q2M2I5 525 aa26.68■■□□□ 1.86
SQLE-206ENST00000523430 FAM208AQ9UK61 1670 aaKnown RBP26.68■■□□□ 1.86
SQLE-206ENST00000523430 MIS18AQ9NYP9 233 aa26.68■■□□□ 1.86
SQLE-206ENST00000523430 ATF7IPQ6VMQ6 1270 aa26.66■■□□□ 1.86
SQLE-206ENST00000523430 FTSJ3Q8IY81 847 aaKnown RBP26.66■■□□□ 1.86
SQLE-206ENST00000523430 DZIP1LQ8IYY4 767 aaKnown RBP26.66■■□□□ 1.86
SQLE-206ENST00000523430 IL17REQ8NFR9 667 aa26.66■■□□□ 1.86
SQLE-206ENST00000523430 KDM2BQ8NHM5 1336 aa26.65■■□□□ 1.86
SQLE-206ENST00000523430 TCERG1O14776 1098 aaKnown RBP26.64■■□□□ 1.86
SQLE-206ENST00000523430 MRPL50Q8N5N7 158 aaKnown RBP26.64■■□□□ 1.86
SQLE-206ENST00000523430 TSPYL4Q9UJ04 414 aa26.64■■□□□ 1.86
SQLE-206ENST00000523430 BRPF1P55201 1214 aaPredicted RBP26.64■■□□□ 1.85
SQLE-206ENST00000523430 ROBO1Q9Y6N7 1651 aa26.63■■□□□ 1.85
SQLE-206ENST00000523430 MVPQ14764 893 aaKnown RBP26.62■■□□□ 1.85
SQLE-206ENST00000523430 CEMIPQ8WUJ3 1361 aa26.61■■□□□ 1.85
SQLE-206ENST00000523430 ZNF530Q6P9A1 599 aaPredicted RBP26.61■■□□□ 1.85
SQLE-206ENST00000523430 PLEKHO1Q53GL0 409 aaPredicted RBP26.6■■□□□ 1.85
SQLE-206ENST00000523430 NLRP2Q9NX02 1062 aa26.6■■□□□ 1.85
SQLE-206ENST00000523430 MS4A1P11836 297 aa26.59■■□□□ 1.85
SQLE-206ENST00000523430 IPO8O15397 1037 aaKnown RBP26.59■■□□□ 1.85
SQLE-206ENST00000523430 AMOTQ4VCS5 1084 aa26.59■■□□□ 1.85
SQLE-206ENST00000523430 MEGF6O75095 1541 aa26.58■■□□□ 1.85
SQLE-206ENST00000523430 CSB-PGBD3P0DP91 1061 aa26.58■■□□□ 1.85
SQLE-206ENST00000523430 AKAP4Q5JQC9 854 aa26.57■■□□□ 1.84
SQLE-206ENST00000523430 CENPQQ7L2Z9 268 aaPredicted RBP26.57■■□□□ 1.84
SQLE-206ENST00000523430 TMEM57Q8N5G2 664 aa26.56■■□□□ 1.84
SQLE-206ENST00000523430 LGR6Q9HBX8 967 aa26.56■■□□□ 1.84
SQLE-206ENST00000523430 PRDM11Q9NQV5 511 aa26.56■■□□□ 1.84
SQLE-206ENST00000523430 HAP1P54257 671 aaPredicted RBP26.55■■□□□ 1.84
SQLE-206ENST00000523430 ITPRIPQ8IWB1 547 aa26.55■■□□□ 1.84
SQLE-206ENST00000523430 VIRMAQ69YN4 1812 aaKnown RBP26.55■■□□□ 1.84
SQLE-206ENST00000523430 AHDC1Q5TGY3 1603 aaPredicted RBP26.55■■□□□ 1.84
SQLE-206ENST00000523430 TAF7Q15545 349 aaPredicted RBP26.53■■□□□ 1.84
SQLE-206ENST00000523430 KDM3BQ7LBC6 1761 aa26.53■■□□□ 1.84
SQLE-206ENST00000523430 COL5A2P05997 1499 aaPredicted RBP26.53■■□□□ 1.84
SQLE-206ENST00000523430 C1orf141Q5JVX7 400 aa26.53■■□□□ 1.84
SQLE-206ENST00000523430 MPRIPQ6WCQ1 1025 aa26.53■■□□□ 1.84
SQLE-206ENST00000523430 SKAP1Q86WV1 359 aa26.53■■□□□ 1.84
SQLE-206ENST00000523430 AAMPQ13685 434 aa26.52■■□□□ 1.84
SQLE-206ENST00000523430 RAPGEF4Q8WZA2 1011 aa26.52■■□□□ 1.84
SQLE-206ENST00000523430 ARHGAP45Q92619 1136 aa26.52■■□□□ 1.84
SQLE-206ENST00000523430 ADAMTS7Q9UKP4 1686 aa26.52■■□□□ 1.84
SQLE-206ENST00000523430 OVOS2A0A0G2JMS6 1433 aa26.52■■□□□ 1.84
SQLE-206ENST00000523430 IGHDP01880 384 aa26.51■■□□□ 1.83
SQLE-206ENST00000523430 BABAM1Q9NWV8 329 aa26.51■■□□□ 1.83
SQLE-206ENST00000523430 PCDHB15Q9Y5E8 787 aa26.51■■□□□ 1.83
SQLE-206ENST00000523430 DDX19BQ9UMR2 479 aa26.5■■□□□ 1.83
SQLE-206ENST00000523430 PKD1L3Q7Z443 1732 aa26.5■■□□□ 1.83
SQLE-206ENST00000523430 ABCC4O15439 1325 aa26.49■■□□□ 1.83
SQLE-206ENST00000523430 RNMTO43148 476 aaKnown RBP26.49■■□□□ 1.83
SQLE-206ENST00000523430 TATP17735 454 aaPredicted RBP26.48■■□□□ 1.83
SQLE-206ENST00000523430 RGS12O14924 1447 aa26.48■■□□□ 1.83
SQLE-206ENST00000523430 WDR17Q8IZU2 1322 aa26.47■■□□□ 1.83
SQLE-206ENST00000523430 SIPA1L3O60292 1781 aaPredicted RBP26.47■■□□□ 1.83
SQLE-206ENST00000523430 COL22A1Q8NFW1 1626 aaPredicted RBP26.45■■□□□ 1.83
SQLE-206ENST00000523430 TEFQ10587 303 aa26.45■■□□□ 1.83
SQLE-206ENST00000523430 API5Q9BZZ5 524 aaKnown RBP26.45■■□□□ 1.83
SQLE-206ENST00000523430 PLEKHG2Q9H7P9 1386 aa26.45■■□□□ 1.82
SQLE-206ENST00000523430 PARP4Q9UKK3 1724 aaKnown RBP26.44■■□□□ 1.82
SQLE-206ENST00000523430 KDM6AO15550 1401 aaPredicted RBP26.44■■□□□ 1.82
SQLE-206ENST00000523430 SCN11AQ9UI33 1791 aa26.43■■□□□ 1.82
SQLE-206ENST00000523430 SPG7Q9UQ90 795 aa26.42■■□□□ 1.82
SQLE-206ENST00000523430 TOM1L2Q6ZVM7 507 aa26.42■■□□□ 1.82
SQLE-206ENST00000523430 ZBTB40Q9NUA8 1239 aa26.42■■□□□ 1.82
SQLE-206ENST00000523430 KCNQ3O43525 872 aa26.41■■□□□ 1.82
SQLE-206ENST00000523430 SLC4A2P04920 1241 aa26.41■■□□□ 1.82
SQLE-206ENST00000523430 PHKG2P15735 406 aa26.41■■□□□ 1.82
SQLE-206ENST00000523430 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.41■■□□□ 1.823e-8■□□□□ 9.2
SQLE-206ENST00000523430 COL16A1Q07092 1604 aaPredicted RBP26.4■■□□□ 1.82
SQLE-206ENST00000523430 BTBD11A6QL63 1104 aa26.4■■□□□ 1.82
SQLE-206ENST00000523430 PHLPP1O60346 1717 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms