RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 PIK3C2AO00443 1686 aa18.6■□□□□ 0.57
CHMP7-210ENST00000523091 GSE1Q14687 1217 aa18.59■□□□□ 0.57
CHMP7-210ENST00000523091 XRN1Q8IZH2 1706 aaKnown RBP18.59■□□□□ 0.57
CHMP7-210ENST00000523091 ARHGEF10O15013 1369 aa18.59■□□□□ 0.57
CHMP7-210ENST00000523091 CEP170BQ9Y4F5 1589 aaPredicted RBP18.59■□□□□ 0.57
CHMP7-210ENST00000523091 CRB1P82279 1406 aa18.59■□□□□ 0.57
CHMP7-210ENST00000523091 ABTB2Q8N961 1025 aa18.58■□□□□ 0.56
CHMP7-210ENST00000523091 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.56
CHMP7-210ENST00000523091 SLKQ9H2G2 1235 aaPredicted RBP18.58■□□□□ 0.56
CHMP7-210ENST00000523091 BECN1Q14457 450 aa18.57■□□□□ 0.56
CHMP7-210ENST00000523091 C14orf37Q86TY3 774 aa18.57■□□□□ 0.56
CHMP7-210ENST00000523091 FRAT2O75474 233 aaPredicted RBP18.57■□□□□ 0.56
CHMP7-210ENST00000523091 C22orf23Q9BZE7 217 aa18.57■□□□□ 0.56
CHMP7-210ENST00000523091 CHMP4BQ9H444 224 aaKnown RBP18.57■□□□□ 0.56
CHMP7-210ENST00000523091 FMN2Q9NZ56 1722 aa18.57■□□□□ 0.56
CHMP7-210ENST00000523091 RTF1Q92541 710 aaKnown RBP18.57■□□□□ 0.56
CHMP7-210ENST00000523091 TBC1D2Q9BYX2 928 aa18.57■□□□□ 0.56
CHMP7-210ENST00000523091 GCC1Q96CN9 775 aa18.56■□□□□ 0.56
CHMP7-210ENST00000523091 IGSF1Q8N6C5 1336 aa18.56■□□□□ 0.56
CHMP7-210ENST00000523091 TSPYL4Q9UJ04 414 aa18.56■□□□□ 0.56
CHMP7-210ENST00000523091 RGS12O14924 1447 aa18.55■□□□□ 0.56
CHMP7-210ENST00000523091 HOXC9P31274 260 aa18.55■□□□□ 0.56
CHMP7-210ENST00000523091 SLC4A2P04920 1241 aa18.55■□□□□ 0.56
CHMP7-210ENST00000523091 KDRP35968 1356 aa18.55■□□□□ 0.56
CHMP7-210ENST00000523091 INTS3Q68E01 1043 aaKnown RBP18.54■□□□□ 0.56
CHMP7-210ENST00000523091 SPRYD3Q8NCJ5 442 aa18.54■□□□□ 0.56
CHMP7-210ENST00000523091 KIAA0232Q92628 1395 aa18.54■□□□□ 0.56
CHMP7-210ENST00000523091 ANKARQ7Z5J8 1434 aa18.53■□□□□ 0.56
CHMP7-210ENST00000523091 G2E3Q7L622 706 aa18.53■□□□□ 0.56
CHMP7-210ENST00000523091 USHBP1Q8N6Y0 703 aa18.52■□□□□ 0.56
CHMP7-210ENST00000523091 ANKLE2Q86XL3 938 aa18.52■□□□□ 0.55
CHMP7-210ENST00000523091 GAS2L2Q8NHY3 880 aa18.51■□□□□ 0.55
CHMP7-210ENST00000523091 PHF8Q9UPP1 1060 aa18.51■□□□□ 0.55
CHMP7-210ENST00000523091 MSH6P52701 1360 aa18.51■□□□□ 0.55
CHMP7-210ENST00000523091 F6X3S4 739 aa18.5■□□□□ 0.55
CHMP7-210ENST00000523091 MEIS3Q99687 375 aa18.5■□□□□ 0.55
CHMP7-210ENST00000523091 MARF1Q9Y4F3 1742 aaKnown RBP18.5■□□□□ 0.55
CHMP7-210ENST00000523091 PLEKHG5O94827 1062 aa18.5■□□□□ 0.55
CHMP7-210ENST00000523091 HAP1P54257 671 aaPredicted RBP18.5■□□□□ 0.55
CHMP7-210ENST00000523091 BMP2KLQ5H9B9 411 aa18.49■□□□□ 0.55
CHMP7-210ENST00000523091 NECTIN2Q92692 538 aa18.49■□□□□ 0.55
CHMP7-210ENST00000523091 ANTXR1Q9H6X2 564 aa18.49■□□□□ 0.55
CHMP7-210ENST00000523091 SLC4A10Q6U841 1118 aa18.48■□□□□ 0.55
CHMP7-210ENST00000523091 C16orf71Q8IYS4 520 aaPredicted RBP18.48■□□□□ 0.55
CHMP7-210ENST00000523091 ZBTB7CA1YPR0 619 aa18.48■□□□□ 0.55
CHMP7-210ENST00000523091 PTPRCP08575 1304 aa18.48■□□□□ 0.55
CHMP7-210ENST00000523091 KIF24Q5T7B8 1368 aa18.48■□□□□ 0.55
CHMP7-210ENST00000523091 ESCO1Q5FWF5 840 aa18.47■□□□□ 0.55
CHMP7-210ENST00000523091 DCTPP1Q9H773 170 aa18.47■□□□□ 0.55
CHMP7-210ENST00000523091 GNAT3A8MTJ3 354 aa18.47■□□□□ 0.55
CHMP7-210ENST00000523091 APBB1O00213 710 aa18.47■□□□□ 0.55
CHMP7-210ENST00000523091 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
CHMP7-210ENST00000523091 IL17REQ8NFR9 667 aa18.47■□□□□ 0.55
CHMP7-210ENST00000523091 ATP10DQ9P241 1426 aa18.47■□□□□ 0.55
CHMP7-210ENST00000523091 ANKRD44Q8N8A2 993 aa18.46■□□□□ 0.55
CHMP7-210ENST00000523091 NWD1Q149M9 1564 aa18.46■□□□□ 0.55
CHMP7-210ENST00000523091 RTL1A6NKG5 1358 aa18.46■□□□□ 0.55
CHMP7-210ENST00000523091 SETD1BQ9UPS6 1966 aaKnown RBP18.45■□□□□ 0.54
CHMP7-210ENST00000523091 TBC1D9Q6ZT07 1266 aa18.45■□□□□ 0.54
CHMP7-210ENST00000523091 PLEKHM2Q8IWE5 1019 aa18.45■□□□□ 0.54
CHMP7-210ENST00000523091 OTUD7AQ8TE49 926 aaPredicted RBP18.45■□□□□ 0.54
CHMP7-210ENST00000523091 CHD2O14647 1828 aaKnown RBP18.44■□□□□ 0.54
CHMP7-210ENST00000523091 SMARCA5O60264 1052 aaPredicted RBP18.44■□□□□ 0.54
CHMP7-210ENST00000523091 GSPT1P15170 499 aaKnown RBP18.44■□□□□ 0.54
CHMP7-210ENST00000523091 XPCQ01831 940 aaPredicted RBP18.44■□□□□ 0.54
CHMP7-210ENST00000523091 PSME1Q06323 249 aa18.44■□□□□ 0.54
CHMP7-210ENST00000523091 FAM43AQ8N2R8 423 aa18.43■□□□□ 0.54
CHMP7-210ENST00000523091 RBM25P49756 843 aaKnown RBP18.42■□□□□ 0.54
CHMP7-210ENST00000523091 RPAP2Q8IXW5 612 aaPredicted RBP18.42■□□□□ 0.54
CHMP7-210ENST00000523091 HTATSF1O43719 755 aaKnown RBP18.42■□□□□ 0.54
CHMP7-210ENST00000523091 NBPF6Q5VWK0 638 aa18.42■□□□□ 0.54
CHMP7-210ENST00000523091 NBPF4Q96M43 638 aa18.42■□□□□ 0.54
CHMP7-210ENST00000523091 MAP3K5Q99683 1374 aa18.41■□□□□ 0.54
CHMP7-210ENST00000523091 ORAI2Q96SN7 254 aa18.41■□□□□ 0.54
CHMP7-210ENST00000523091 PKNOX2Q96KN3 472 aa18.41■□□□□ 0.54
CHMP7-210ENST00000523091 STK31Q9BXU1 1019 aa18.41■□□□□ 0.54
CHMP7-210ENST00000523091 IP6K1Q92551 441 aa18.4■□□□□ 0.54
CHMP7-210ENST00000523091 FLIIQ13045 1269 aa18.39■□□□□ 0.54
CHMP7-210ENST00000523091 FKBP5Q13451 457 aaPredicted RBP18.39■□□□□ 0.54
CHMP7-210ENST00000523091 LRRC59Q96AG4 307 aaKnown RBP18.39■□□□□ 0.54
CHMP7-210ENST00000523091 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.53
CHMP7-210ENST00000523091 KIF2CQ99661 725 aa18.39■□□□□ 0.53
CHMP7-210ENST00000523091 LTN1O94822 1766 aa18.39■□□□□ 0.53
CHMP7-210ENST00000523091 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
CHMP7-210ENST00000523091 HSCBQ8IWL3 235 aa18.38■□□□□ 0.53
CHMP7-210ENST00000523091 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
CHMP7-210ENST00000523091 CCT4P50991 539 aaKnown RBP18.37■□□□□ 0.53
CHMP7-210ENST00000523091 LMOD2Q6P5Q4 547 aa18.37■□□□□ 0.53
CHMP7-210ENST00000523091 ADGRL3Q9HAR2 1447 aa18.37■□□□□ 0.53
CHMP7-210ENST00000523091 LRRC37A3O60309 1634 aa18.37■□□□□ 0.53
CHMP7-210ENST00000523091 TTC22Q5TAA0 569 aa18.37■□□□□ 0.53
CHMP7-210ENST00000523091 USP54Q70EL1 1684 aa18.37■□□□□ 0.53
CHMP7-210ENST00000523091 CDC45O75419 566 aa18.36■□□□□ 0.53
CHMP7-210ENST00000523091 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
CHMP7-210ENST00000523091 NFAT5O94916 1531 aa18.35■□□□□ 0.53
CHMP7-210ENST00000523091 CD2BP2O95400 341 aaKnown RBP18.35■□□□□ 0.53
CHMP7-210ENST00000523091 PHAXQ9H814 394 aaKnown RBP18.34■□□□□ 0.53
CHMP7-210ENST00000523091 EXOC6BQ9Y2D4 811 aa18.34■□□□□ 0.53
CHMP7-210ENST00000523091 ZNF142P52746 1687 aaPredicted RBP18.34■□□□□ 0.53
CHMP7-210ENST00000523091 NPHP4O75161 1426 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms