RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 MEGF6O75095 1541 aa19.59■□□□□ 0.73
CSGALNACT1-211ENST00000522854 IL16Q14005 1332 aa19.59■□□□□ 0.73
CSGALNACT1-211ENST00000522854 RRP1P56182 461 aaKnown RBP19.59■□□□□ 0.73
CSGALNACT1-211ENST00000522854 LMOD3Q0VAK6 560 aa19.59■□□□□ 0.73
CSGALNACT1-211ENST00000522854 LARP1Q6PKG0 1096 aaKnown RBP19.59■□□□□ 0.73
CSGALNACT1-211ENST00000522854 BTG4Q9NY30 223 aa19.59■□□□□ 0.73
CSGALNACT1-211ENST00000522854 MIS18AQ9NYP9 233 aa19.59■□□□□ 0.73
CSGALNACT1-211ENST00000522854 TOM1L2Q6ZVM7 507 aa19.58■□□□□ 0.73
CSGALNACT1-211ENST00000522854 MBIPQ9NS73 344 aa19.58■□□□□ 0.73
CSGALNACT1-211ENST00000522854 BCL2L13Q9BXK5 485 aa19.57■□□□□ 0.72
CSGALNACT1-211ENST00000522854 WDR17Q8IZU2 1322 aa19.57■□□□□ 0.72
CSGALNACT1-211ENST00000522854 GNAT3A8MTJ3 354 aa19.57■□□□□ 0.72
CSGALNACT1-211ENST00000522854 RTF1Q92541 710 aaKnown RBP19.57■□□□□ 0.72
CSGALNACT1-211ENST00000522854 USP35Q9P2H5 1018 aa19.57■□□□□ 0.72
CSGALNACT1-211ENST00000522854 IL17REQ8NFR9 667 aa19.56■□□□□ 0.72
CSGALNACT1-211ENST00000522854 MAP3K5Q99683 1374 aa19.56■□□□□ 0.72
CSGALNACT1-211ENST00000522854 ZNF853P0CG23 659 aa19.55■□□□□ 0.72
CSGALNACT1-211ENST00000522854 ZNF530Q6P9A1 599 aaPredicted RBP19.55■□□□□ 0.72
CSGALNACT1-211ENST00000522854 CRB1P82279 1406 aa19.55■□□□□ 0.72
CSGALNACT1-211ENST00000522854 ELL2O00472 640 aaPredicted RBP19.55■□□□□ 0.72
CSGALNACT1-211ENST00000522854 EVA1CP58658 441 aa19.55■□□□□ 0.72
CSGALNACT1-211ENST00000522854 CFAP44Q96MT7 982 aa19.55■□□□□ 0.72
CSGALNACT1-211ENST00000522854 LGR6Q9HBX8 967 aa19.55■□□□□ 0.72
CSGALNACT1-211ENST00000522854 IFT57Q9NWB7 429 aa19.55■□□□□ 0.72
CSGALNACT1-211ENST00000522854 KRT24Q2M2I5 525 aa19.54■□□□□ 0.72
CSGALNACT1-211ENST00000522854 RAPGEF4Q8WZA2 1011 aa19.54■□□□□ 0.72
CSGALNACT1-211ENST00000522854 GNAI1P63096 354 aa19.53■□□□□ 0.72
CSGALNACT1-211ENST00000522854 PLEKHO1Q53GL0 409 aaPredicted RBP19.53■□□□□ 0.72
CSGALNACT1-211ENST00000522854 MPRIPQ6WCQ1 1025 aa19.53■□□□□ 0.72
CSGALNACT1-211ENST00000522854 TSPYL6Q8N831 410 aa19.53■□□□□ 0.72
CSGALNACT1-211ENST00000522854 VIRMAQ69YN4 1812 aaKnown RBP19.53■□□□□ 0.72
CSGALNACT1-211ENST00000522854 C20orf194Q5TEA3 1177 aa19.53■□□□□ 0.72
CSGALNACT1-211ENST00000522854 COL14A1Q05707 1796 aaKnown RBP19.52■□□□□ 0.72
CSGALNACT1-211ENST00000522854 CALD1Q05682 793 aaKnown RBP19.52■□□□□ 0.72
CSGALNACT1-211ENST00000522854 RARSP54136 660 aaKnown RBP19.52■□□□□ 0.71
CSGALNACT1-211ENST00000522854 TATP17735 454 aaPredicted RBP19.51■□□□□ 0.71
CSGALNACT1-211ENST00000522854 LRRC37A3O60309 1634 aa19.51■□□□□ 0.71
CSGALNACT1-211ENST00000522854 C8orf58Q8NAV2 365 aa19.5■□□□□ 0.71
CSGALNACT1-211ENST00000522854 PLCH1Q4KWH8 1693 aa19.5■□□□□ 0.71
CSGALNACT1-211ENST00000522854 CHL1O00533 1208 aa19.5■□□□□ 0.71
CSGALNACT1-211ENST00000522854 AMOTQ4VCS5 1084 aa19.5■□□□□ 0.71
CSGALNACT1-211ENST00000522854 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
CSGALNACT1-211ENST00000522854 HSPA1LP34931 641 aa19.49■□□□□ 0.71
CSGALNACT1-211ENST00000522854 AKAP4Q5JQC9 854 aa19.49■□□□□ 0.71
CSGALNACT1-211ENST00000522854 C1orf141Q5JVX7 400 aa19.48■□□□□ 0.71
CSGALNACT1-211ENST00000522854 FRAT1Q92837 279 aaPredicted RBP19.48■□□□□ 0.71
CSGALNACT1-211ENST00000522854 CARD10Q9BWT7 1032 aa19.48■□□□□ 0.71
CSGALNACT1-211ENST00000522854 HTATSF1O43719 755 aaKnown RBP19.47■□□□□ 0.71
CSGALNACT1-211ENST00000522854 TSPYL4Q9UJ04 414 aa19.47■□□□□ 0.71
CSGALNACT1-211ENST00000522854 TNNQ9UQP3 1299 aa19.47■□□□□ 0.71
CSGALNACT1-211ENST00000522854 SSH1Q8WYL5 1049 aa19.46■□□□□ 0.71
CSGALNACT1-211ENST00000522854 CEMIPQ8WUJ3 1361 aa19.46■□□□□ 0.71
CSGALNACT1-211ENST00000522854 CYP27B1O15528 508 aa19.46■□□□□ 0.71
CSGALNACT1-211ENST00000522854 PKD1L3Q7Z443 1732 aa19.45■□□□□ 0.7
CSGALNACT1-211ENST00000522854 VAMP4O75379 141 aa19.45■□□□□ 0.7
CSGALNACT1-211ENST00000522854 EXOC6Q8TAG9 804 aa19.45■□□□□ 0.7
CSGALNACT1-211ENST00000522854 JCADQ9P266 1359 aa19.45■□□□□ 0.7
CSGALNACT1-211ENST00000522854 OVOS2A0A0G2JMS6 1433 aa19.45■□□□□ 0.7
CSGALNACT1-211ENST00000522854 RNMTO43148 476 aaKnown RBP19.44■□□□□ 0.7
CSGALNACT1-211ENST00000522854 PHKG2P15735 406 aa19.44■□□□□ 0.7
CSGALNACT1-211ENST00000522854 TWISTNBQ3B726 338 aaPredicted RBP19.44■□□□□ 0.7
CSGALNACT1-211ENST00000522854 PARP4Q9UKK3 1724 aaKnown RBP19.44■□□□□ 0.7
CSGALNACT1-211ENST00000522854 SMC4Q9NTJ3 1288 aa19.44■□□□□ 0.7
CSGALNACT1-211ENST00000522854 SPG7Q9UQ90 795 aa19.44■□□□□ 0.7
CSGALNACT1-211ENST00000522854 IL2RBP14784 551 aa19.43■□□□□ 0.7
CSGALNACT1-211ENST00000522854 C8orf37Q96NL8 207 aa19.43■□□□□ 0.7
CSGALNACT1-211ENST00000522854 KDM6AO15550 1401 aaPredicted RBP19.43■□□□□ 0.7
CSGALNACT1-211ENST00000522854 NRAPQ86VF7 1730 aa19.43■□□□□ 0.7
CSGALNACT1-211ENST00000522854 KCNQ3O43525 872 aa19.43■□□□□ 0.7
CSGALNACT1-211ENST00000522854 LRP6O75581 1613 aa19.43■□□□□ 0.7
CSGALNACT1-211ENST00000522854 TAF7Q15545 349 aaPredicted RBP19.43■□□□□ 0.7
CSGALNACT1-211ENST00000522854 CRBNQ96SW2 442 aa19.43■□□□□ 0.7
CSGALNACT1-211ENST00000522854 SHANK3Q9BYB0 1731 aa19.42■□□□□ 0.7
CSGALNACT1-211ENST00000522854 CANXP27824 592 aaKnown RBP19.41■□□□□ 0.7
CSGALNACT1-211ENST00000522854 TEFQ10587 303 aa19.41■□□□□ 0.7
CSGALNACT1-211ENST00000522854 DDX54Q8TDD1 881 aaKnown RBP19.41■□□□□ 0.7
CSGALNACT1-211ENST00000522854 SCN11AQ9UI33 1791 aa19.4■□□□□ 0.7
CSGALNACT1-211ENST00000522854 CT47B1P0C2W7 299 aaPredicted RBP19.4■□□□□ 0.7
CSGALNACT1-211ENST00000522854 IFNL2Q8IZJ0 200 aa19.4■□□□□ 0.7
CSGALNACT1-211ENST00000522854 ZCRB1Q8TBF4 217 aaKnown RBP19.4■□□□□ 0.7
CSGALNACT1-211ENST00000522854 PANK1Q8TE04 598 aa19.4■□□□□ 0.7
CSGALNACT1-211ENST00000522854 CLUAP1Q96AJ1 413 aa19.4■□□□□ 0.7
CSGALNACT1-211ENST00000522854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.4■□□□□ 0.7
CSGALNACT1-211ENST00000522854 B4GALNT3Q6L9W6 998 aa19.39■□□□□ 0.69
CSGALNACT1-211ENST00000522854 ADAMTS7Q9UKP4 1686 aa19.38■□□□□ 0.69
CSGALNACT1-211ENST00000522854 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
CSGALNACT1-211ENST00000522854 RLBP1P12271 317 aa19.38■□□□□ 0.69
CSGALNACT1-211ENST00000522854 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.38■□□□□ 0.69
CSGALNACT1-211ENST00000522854 NGLY1Q96IV0 654 aa19.38■□□□□ 0.69
CSGALNACT1-211ENST00000522854 SIPA1L3O60292 1781 aaPredicted RBP19.38■□□□□ 0.69
CSGALNACT1-211ENST00000522854 SLIT2O94813 1529 aa19.38■□□□□ 0.69
CSGALNACT1-211ENST00000522854 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
CSGALNACT1-211ENST00000522854 NOB1Q9ULX3 412 aaKnown RBP19.37■□□□□ 0.69
CSGALNACT1-211ENST00000522854 KDM3BQ7LBC6 1761 aa19.37■□□□□ 0.69
CSGALNACT1-211ENST00000522854 NFATC2IPQ8NCF5 419 aa19.37■□□□□ 0.69
CSGALNACT1-211ENST00000522854 CCDC9Q9Y3X0 531 aaKnown RBP19.37■□□□□ 0.69
CSGALNACT1-211ENST00000522854 PCDH11XQ9BZA7 1347 aa19.36■□□□□ 0.69
CSGALNACT1-211ENST00000522854 PCDH11YQ9BZA8 1340 aa19.36■□□□□ 0.69
CSGALNACT1-211ENST00000522854 SLC39A6Q13433 755 aa19.35■□□□□ 0.69
CSGALNACT1-211ENST00000522854 NWD2Q9ULI1 1742 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms