RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 TNNT2P45379 298 aaPredicted RBP14.17□□□□□ -0.14
CTNNA1-235ENST00000522730 SLC15A2Q16348 729 aa14.17□□□□□ -0.14
CTNNA1-235ENST00000522730 RAPGEF4Q8WZA2 1011 aa14.17□□□□□ -0.14
CTNNA1-235ENST00000522730 USP54Q70EL1 1684 aa14.17□□□□□ -0.14
CTNNA1-235ENST00000522730 HSPA5P11021 654 aaKnown RBP14.16□□□□□ -0.14
CTNNA1-235ENST00000522730 EMILIN1Q9Y6C2 1016 aa14.16□□□□□ -0.14
CTNNA1-235ENST00000522730 NSD3Q9BZ95 1437 aa14.15□□□□□ -0.14
CTNNA1-235ENST00000522730 TATP17735 454 aaPredicted RBP14.15□□□□□ -0.14
CTNNA1-235ENST00000522730 KCNQ4P56696 695 aa14.15□□□□□ -0.14
CTNNA1-235ENST00000522730 EIF4G2P78344 907 aaKnown RBP eCLIP14.15□□□□□ -0.14
CTNNA1-235ENST00000522730 SMG6Q86US8 1419 aaKnown RBP14.14□□□□□ -0.15
CTNNA1-235ENST00000522730 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
CTNNA1-235ENST00000522730 LRRC4BQ9NT99 713 aa14.13□□□□□ -0.15
CTNNA1-235ENST00000522730 CGNL1Q0VF96 1302 aa14.13□□□□□ -0.15
CTNNA1-235ENST00000522730 RTL1A6NKG5 1358 aa14.12□□□□□ -0.15
CTNNA1-235ENST00000522730 PANK3Q9H999 370 aa14.12□□□□□ -0.15
CTNNA1-235ENST00000522730 INSRP06213 1382 aa14.1□□□□□ -0.15
CTNNA1-235ENST00000522730 FLT4P35916 1363 aa14.1□□□□□ -0.15
CTNNA1-235ENST00000522730 RGPD2P0DJD1 1756 aa14.1□□□□□ -0.15
CTNNA1-235ENST00000522730 ZNF827Q17R98 1081 aa14.1□□□□□ -0.15
CTNNA1-235ENST00000522730 MEGF6O75095 1541 aa14.1□□□□□ -0.15
CTNNA1-235ENST00000522730 TFCP2L1Q9NZI6 479 aa14.09□□□□□ -0.15
CTNNA1-235ENST00000522730 NHSQ6T4R5 1651 aa14.08□□□□□ -0.16
CTNNA1-235ENST00000522730 PTGER2P43116 358 aa14.08□□□□□ -0.16
CTNNA1-235ENST00000522730 SLC27A3Q5K4L6 730 aa14.08□□□□□ -0.16
CTNNA1-235ENST00000522730 MPRIPQ6WCQ1 1025 aa14.08□□□□□ -0.16
CTNNA1-235ENST00000522730 MTFR1LQ9H019 292 aa14.08□□□□□ -0.16
CTNNA1-235ENST00000522730 CCNL1Q9UK58 526 aaPredicted RBP14.08□□□□□ -0.16
CTNNA1-235ENST00000522730 RGPD3A6NKT7 1758 aaPredicted RBP14.07□□□□□ -0.16
CTNNA1-235ENST00000522730 RGPD4Q7Z3J3 1758 aa14.07□□□□□ -0.16
CTNNA1-235ENST00000522730 BTAF1O14981 1849 aa14.07□□□□□ -0.16
CTNNA1-235ENST00000522730 KLHL34Q8N239 644 aa14.07□□□□□ -0.16
CTNNA1-235ENST00000522730 POLKQ9UBT6 870 aa14.07□□□□□ -0.16
CTNNA1-235ENST00000522730 AKT1S1Q96B36 256 aa14.06□□□□□ -0.16
CTNNA1-235ENST00000522730 EYA1Q99502 592 aa14.06□□□□□ -0.16
CTNNA1-235ENST00000522730 FHDC1Q9C0D6 1143 aaPredicted RBP14.06□□□□□ -0.16
CTNNA1-235ENST00000522730 FAM208AQ9UK61 1670 aaKnown RBP14.06□□□□□ -0.16
CTNNA1-235ENST00000522730 WASHC2AQ641Q2 1341 aa14.06□□□□□ -0.16
CTNNA1-235ENST00000522730 PCDH11XQ9BZA7 1347 aa14.06□□□□□ -0.16
CTNNA1-235ENST00000522730 PCDH11YQ9BZA8 1340 aa14.06□□□□□ -0.16
CTNNA1-235ENST00000522730 KIF20BQ96Q89 1820 aa14.06□□□□□ -0.16
CTNNA1-235ENST00000522730 ZBTB22O15209 634 aa14.05□□□□□ -0.16
CTNNA1-235ENST00000522730 CYP27B1O15528 508 aa14.05□□□□□ -0.16
CTNNA1-235ENST00000522730 ARXQ96QS3 562 aa14.05□□□□□ -0.16
CTNNA1-235ENST00000522730 SPG7Q9UQ90 795 aa14.05□□□□□ -0.16
CTNNA1-235ENST00000522730 KIF24Q5T7B8 1368 aa14.05□□□□□ -0.16
CTNNA1-235ENST00000522730 YY1P25490 414 aa14.04□□□□□ -0.16
CTNNA1-235ENST00000522730 MORC1Q86VD1 984 aa14.04□□□□□ -0.16
CTNNA1-235ENST00000522730 MYOM1P52179 1685 aa14.04□□□□□ -0.16
CTNNA1-235ENST00000522730 EIF4A2Q14240 407 aaKnown RBP14.03□□□□□ -0.16
CTNNA1-235ENST00000522730 SYT17Q9BSW7 474 aa14.03□□□□□ -0.16
CTNNA1-235ENST00000522730 NSD2O96028 1365 aa14.03□□□□□ -0.16
CTNNA1-235ENST00000522730 CASZ1Q86V15 1759 aa14.02□□□□□ -0.16
CTNNA1-235ENST00000522730 PNPLA7Q6ZV29 1317 aa14.02□□□□□ -0.17
CTNNA1-235ENST00000522730 POLD1P28340 1107 aa14.02□□□□□ -0.17
CTNNA1-235ENST00000522730 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.17
CTNNA1-235ENST00000522730 KNSTRNQ9Y448 316 aa14.02□□□□□ -0.17
CTNNA1-235ENST00000522730 SLC16A10Q8TF71 515 aa14□□□□□ -0.17
CTNNA1-235ENST00000522730 PIGBQ92521 554 aa14□□□□□ -0.17
CTNNA1-235ENST00000522730 SGIP1Q9BQI5 828 aa14□□□□□ -0.17
CTNNA1-235ENST00000522730 DOT1LQ8TEK3 1739 aa14□□□□□ -0.17
CTNNA1-235ENST00000522730 MSL1Q68DK7 614 aa13.99□□□□□ -0.17
CTNNA1-235ENST00000522730 COL23A1Q86Y22 540 aaPredicted RBP13.99□□□□□ -0.17
CTNNA1-235ENST00000522730 IFNL2Q8IZJ0 200 aa13.99□□□□□ -0.17
CTNNA1-235ENST00000522730 PELP1Q8IZL8 1130 aaKnown RBP13.99□□□□□ -0.17
CTNNA1-235ENST00000522730 TMOD3Q9NYL9 352 aa13.99□□□□□ -0.17
CTNNA1-235ENST00000522730 MAP2P11137 1827 aaKnown RBP13.99□□□□□ -0.17
CTNNA1-235ENST00000522730 PALLDQ8WX93 1383 aa13.98□□□□□ -0.17
CTNNA1-235ENST00000522730 SMARCC1Q92922 1105 aaPredicted RBP13.98□□□□□ -0.17
CTNNA1-235ENST00000522730 PHKG2P15735 406 aa13.97□□□□□ -0.17
CTNNA1-235ENST00000522730 NKX1-1Q15270 411 aaPredicted RBP13.97□□□□□ -0.17
CTNNA1-235ENST00000522730 GPR162Q16538 588 aa13.97□□□□□ -0.17
CTNNA1-235ENST00000522730 SMIM5Q71RC9 77 aa13.97□□□□□ -0.17
CTNNA1-235ENST00000522730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.97□□□□□ -0.171e-9■□□□□ 9.3
CTNNA1-235ENST00000522730 SHANK3Q9BYB0 1731 aa13.97□□□□□ -0.17
CTNNA1-235ENST00000522730 PHF14O94880 888 aa13.96□□□□□ -0.17
CTNNA1-235ENST00000522730 PLEKHO1Q53GL0 409 aaPredicted RBP13.96□□□□□ -0.17
CTNNA1-235ENST00000522730 AK7Q96M32 723 aa13.96□□□□□ -0.17
CTNNA1-235ENST00000522730 ASAP1Q9ULH1 1129 aa13.96□□□□□ -0.17
CTNNA1-235ENST00000522730 PAPPAQ13219 1627 aa13.96□□□□□ -0.17
CTNNA1-235ENST00000522730 KIF7Q2M1P5 1343 aa13.95□□□□□ -0.18
CTNNA1-235ENST00000522730 SLC4A2P04920 1241 aa13.95□□□□□ -0.18
CTNNA1-235ENST00000522730 CC2D1BQ5T0F9 858 aaKnown RBP13.95□□□□□ -0.18
CTNNA1-235ENST00000522730 AEBP1Q8IUX7 1158 aa13.95□□□□□ -0.18
CTNNA1-235ENST00000522730 SULT6B1Q6IMI4 303 aa13.94□□□□□ -0.18
CTNNA1-235ENST00000522730 ZNF530Q6P9A1 599 aaPredicted RBP13.94□□□□□ -0.18
CTNNA1-235ENST00000522730 LOC102724428A0A0B4J2F2 783 aa13.93□□□□□ -0.18
CTNNA1-235ENST00000522730 HMGB2P26583 209 aaKnown RBP13.93□□□□□ -0.18
CTNNA1-235ENST00000522730 ATP6V1AP38606 617 aa13.93□□□□□ -0.18
CTNNA1-235ENST00000522730 SIK1P57059 783 aa13.93□□□□□ -0.18
CTNNA1-235ENST00000522730 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
CTNNA1-235ENST00000522730 IGSF1Q8N6C5 1336 aa13.92□□□□□ -0.18
CTNNA1-235ENST00000522730 MTHFSP49914 203 aa13.92□□□□□ -0.18
CTNNA1-235ENST00000522730 CABP4P57796 275 aa13.92□□□□□ -0.18
CTNNA1-235ENST00000522730 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
CTNNA1-235ENST00000522730 LINC00116Q8NCU8 138 aa13.92□□□□□ -0.18
CTNNA1-235ENST00000522730 FLAD1Q8NFF5 587 aa13.92□□□□□ -0.18
CTNNA1-235ENST00000522730 NLGN2Q8NFZ4 835 aa13.92□□□□□ -0.18
CTNNA1-235ENST00000522730 ATG3Q9NT62 314 aa13.92□□□□□ -0.18
CTNNA1-235ENST00000522730 LY75O60449 1722 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms