RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 KRT28Q7Z3Y7 464 aa19.27■□□□□ 0.68
PCDHA3-201ENST00000522353 AEBP1Q8IUX7 1158 aa19.27■□□□□ 0.68
PCDHA3-201ENST00000522353 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.27■□□□□ 0.68
PCDHA3-201ENST00000522353 ABCF2Q9UG63 623 aa19.27■□□□□ 0.68
PCDHA3-201ENST00000522353 NAIPQ13075 1403 aa19.27■□□□□ 0.67
PCDHA3-201ENST00000522353 BLOC1S2Q6QNY1 142 aa19.27■□□□□ 0.67
PCDHA3-201ENST00000522353 CCDC85AQ96PX6 553 aaPredicted RBP19.27■□□□□ 0.67
PCDHA3-201ENST00000522353 SETQ01105 290 aaPredicted RBP19.26■□□□□ 0.67
PCDHA3-201ENST00000522353 NME9Q86XW9 330 aa19.26■□□□□ 0.67
PCDHA3-201ENST00000522353 AIDAQ96BJ3 306 aa19.26■□□□□ 0.67
PCDHA3-201ENST00000522353 STK11IPQ8N1F8 1099 aa19.26■□□□□ 0.67
PCDHA3-201ENST00000522353 CDR1P51861 262 aa19.26■□□□□ 0.67
PCDHA3-201ENST00000522353 SYCP1Q15431 976 aa19.25■□□□□ 0.67
PCDHA3-201ENST00000522353 CUL7Q14999 1698 aa19.25■□□□□ 0.67
PCDHA3-201ENST00000522353 TEX13AQ9BXU3 409 aaPredicted RBP19.25■□□□□ 0.67
PCDHA3-201ENST00000522353 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
PCDHA3-201ENST00000522353 ABCC11Q96J66 1382 aa19.25■□□□□ 0.67
PCDHA3-201ENST00000522353 MCM10Q7L590 875 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 MRE11P49959 708 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 PDILTQ8N807 584 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 FANCAO15360 1455 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 PAF1Q8N7H5 531 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 STIM1Q13586 685 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 CHD1LQ86WJ1 897 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 MNS1Q8NEH6 495 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 KIF1BPQ96EK5 621 aa19.24■□□□□ 0.67
PCDHA3-201ENST00000522353 MPHOSPH10O00566 681 aaKnown RBP19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 FMNL2Q96PY5 1086 aa19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 NFKBIBQ15653 356 aa19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 IL1RAPL2Q9NP60 686 aa19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 ARGLU1Q9NWB6 273 aaPredicted RBP19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 SMARCE1Q969G3 411 aa19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 BMP2KQ9NSY1 1161 aaPredicted RBP19.23■□□□□ 0.67
PCDHA3-201ENST00000522353 TOM1O60784 492 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 IFIT5Q13325 482 aaKnown RBP19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 TEX35Q5T0J7 233 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 TTC21BQ7Z4L5 1316 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 HSP90AB2PQ58FF8 381 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 ACBD3Q9H3P7 528 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 ANKIB1Q9P2G1 1089 aa19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 IMMTQ16891 758 aaKnown RBP19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 TRMT112Q9UI30 125 aaKnown RBP19.22■□□□□ 0.67
PCDHA3-201ENST00000522353 WASF1Q92558 559 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 USHBP1Q8N6Y0 703 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 RPGRQ92834 1020 aaKnown RBP19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 RUFY1Q96T51 708 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 RAB11FIP3O75154 756 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 FAM43AQ8N2R8 423 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 CCDC39Q9UFE4 941 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 ABCC5O15440 1437 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 FIBPO43427 364 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 IFNL2Q8IZJ0 200 aa19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 ZSCAN31Q96LW9 406 aaPredicted RBP19.21■□□□□ 0.67
PCDHA3-201ENST00000522353 MAP4K4O95819 1239 aaPredicted RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 MYD88Q99836 296 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 HYPKQ9NX55 129 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 FAM13BQ9NYF5 915 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 TNRQ92752 1358 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 ADGRF5Q8IZF2 1346 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 STK3Q13188 491 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 CRACR2BQ8N4Y2 399 aaPredicted RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 MSH6P52701 1360 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 DHX29Q7Z478 1369 aaKnown RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 NASPP49321 788 aaPredicted RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 ZHX3Q9H4I2 956 aa19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 DBF4Q9UBU7 674 aaPredicted RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 GLRX3O76003 335 aaKnown RBP19.2■□□□□ 0.66
PCDHA3-201ENST00000522353 DACH1Q9UI36 760 aa19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 PDIA4P13667 645 aaKnown RBP19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 ZNF76P36508 570 aa19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 USP5P45974 858 aa19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 SLF2Q8IX21 1173 aa19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 PDCL3Q9H2J4 239 aa19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 WDR33Q9C0J8 1336 aaKnown RBP19.19■□□□□ 0.66
PCDHA3-201ENST00000522353 CWC27Q6UX04 472 aaKnown RBP19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 TRIM5Q9C035 493 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 EMILIN1Q9Y6C2 1016 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 CEBPZQ03701 1054 aaKnown RBP19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 POLR3DP05423 398 aaPredicted RBP19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 KRT85P78386 507 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 AK7Q96M32 723 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 THUMPD2Q9BTF0 503 aaKnown RBP19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 FAM135AQ9P2D6 1515 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 ALDH1L2Q3SY69 923 aa19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 DZIP1Q86YF9 867 aaKnown RBP19.18■□□□□ 0.66
PCDHA3-201ENST00000522353 ME1P48163 572 aa19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 LARP1BQ659C4 914 aaKnown RBP19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 SPINK5Q9NQ38 1064 aaPredicted RBP19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 MYO6Q9UM54 1294 aa19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 TRAK2O60296 914 aa19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 MAP3K12Q12852 859 aa19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 ZNHIT6Q9NWK9 470 aaKnown RBP19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 SLC5A1P13866 664 aa19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 U3KPZ7 1027 aaPredicted RBP19.17■□□□□ 0.66
PCDHA3-201ENST00000522353 SLFN5Q08AF3 891 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 LUC7LQ9NQ29 371 aaKnown RBP19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 PDRG1Q9NUG6 133 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 ANKRD18BA2A2Z9 1011 aa19.16■□□□□ 0.66
PCDHA3-201ENST00000522353 TEX14Q8IWB6 1497 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms