RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 ANKRD24Q8TF21 1146 aa16.11■□□□□ 0.17
CTNNA1-234ENST00000522227 QRICH2Q9H0J4 1663 aa16.1■□□□□ 0.17
CTNNA1-234ENST00000522227 CENPJQ9HC77 1338 aaPredicted RBP16.1■□□□□ 0.17
CTNNA1-234ENST00000522227 NFAT5O94916 1531 aa16.09■□□□□ 0.17
CTNNA1-234ENST00000522227 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
CTNNA1-234ENST00000522227 LTV1Q96GA3 475 aaPredicted RBP16.08■□□□□ 0.16
CTNNA1-234ENST00000522227 PHF14O94880 888 aa16.07■□□□□ 0.16
CTNNA1-234ENST00000522227 RBM46Q8TBY0 533 aaKnown RBP16.07■□□□□ 0.16
CTNNA1-234ENST00000522227 NSD2O96028 1365 aa16.07■□□□□ 0.16
CTNNA1-234ENST00000522227 ANKRD36BQ8N2N9 1353 aa16.07■□□□□ 0.16
CTNNA1-234ENST00000522227 LY75O60449 1722 aa16.07■□□□□ 0.16
CTNNA1-234ENST00000522227 DOT1LQ8TEK3 1739 aa16.07■□□□□ 0.16
CTNNA1-234ENST00000522227 HSPA1AP0DMV8 641 aaKnown RBP16.06■□□□□ 0.16
CTNNA1-234ENST00000522227 HSPA1BP0DMV9 641 aaKnown RBP16.06■□□□□ 0.16
CTNNA1-234ENST00000522227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.06■□□□□ 0.161e-6■■□□□ 12.4
CTNNA1-234ENST00000522227 STAC3Q96MF2 364 aa16.06■□□□□ 0.16
CTNNA1-234ENST00000522227 USP47Q96K76 1375 aa16.05■□□□□ 0.16
CTNNA1-234ENST00000522227 ARHGAP27Q6ZUM4 889 aa16.05■□□□□ 0.16
CTNNA1-234ENST00000522227 TTC21AQ8NDW8 1320 aa16.04■□□□□ 0.16
CTNNA1-234ENST00000522227 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
CTNNA1-234ENST00000522227 BCS1LQ9Y276 419 aa16.04■□□□□ 0.16
CTNNA1-234ENST00000522227 FLAD1Q8NFF5 587 aa16.03■□□□□ 0.16
CTNNA1-234ENST00000522227 AMIGO3Q86WK7 504 aa16.02■□□□□ 0.16
CTNNA1-234ENST00000522227 KTN1Q86UP2 1357 aaKnown RBP16.01■□□□□ 0.15
CTNNA1-234ENST00000522227 FSTL1Q12841 308 aa16.01■□□□□ 0.15
CTNNA1-234ENST00000522227 NME9Q86XW9 330 aa16.01■□□□□ 0.15
CTNNA1-234ENST00000522227 AK7Q96M32 723 aa16.01■□□□□ 0.15
CTNNA1-234ENST00000522227 EVC2Q86UK5 1308 aa15.99■□□□□ 0.15
CTNNA1-234ENST00000522227 C5P01031 1676 aa15.99■□□□□ 0.15
CTNNA1-234ENST00000522227 A0A0G2JLW4 131 aa15.99■□□□□ 0.15
CTNNA1-234ENST00000522227 C9orf131Q5VYM1 1079 aa15.99■□□□□ 0.15
CTNNA1-234ENST00000522227 ZCRB1Q8TBF4 217 aaKnown RBP15.99■□□□□ 0.15
CTNNA1-234ENST00000522227 RRAGCQ9HB90 399 aa15.99■□□□□ 0.15
CTNNA1-234ENST00000522227 LTN1O94822 1766 aa15.99■□□□□ 0.15
CTNNA1-234ENST00000522227 CICQ96RK0 1608 aaPredicted RBP15.98■□□□□ 0.15
CTNNA1-234ENST00000522227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.97■□□□□ 0.15
CTNNA1-234ENST00000522227 KCPQ6ZWJ8 1503 aa15.97■□□□□ 0.15
CTNNA1-234ENST00000522227 FCHSD2O94868 740 aa15.96■□□□□ 0.15
CTNNA1-234ENST00000522227 PALLDQ8WX93 1383 aa15.95■□□□□ 0.14
CTNNA1-234ENST00000522227 RAB3GAP2Q9H2M9 1393 aa15.95■□□□□ 0.14
CTNNA1-234ENST00000522227 PXDNLA1KZ92 1463 aa15.95■□□□□ 0.14
CTNNA1-234ENST00000522227 USP54Q70EL1 1684 aa15.95■□□□□ 0.14
CTNNA1-234ENST00000522227 N4BP2Q86UW6 1770 aaPredicted RBP15.95■□□□□ 0.14
CTNNA1-234ENST00000522227 KIAA1210Q9ULL0 1709 aa15.94■□□□□ 0.14
CTNNA1-234ENST00000522227 MPRIPQ6WCQ1 1025 aa15.94■□□□□ 0.14
CTNNA1-234ENST00000522227 MMP10P09238 476 aa15.93■□□□□ 0.14
CTNNA1-234ENST00000522227 SMC1BQ8NDV3 1235 aa15.93■□□□□ 0.14
CTNNA1-234ENST00000522227 KDM2BQ8NHM5 1336 aa15.93■□□□□ 0.14
CTNNA1-234ENST00000522227 TAF1LQ8IZX4 1826 aa15.92■□□□□ 0.14
CTNNA1-234ENST00000522227 USP31Q70CQ4 1352 aa15.92■□□□□ 0.14
CTNNA1-234ENST00000522227 C4BP0C0L5 1744 aa15.92■□□□□ 0.14
CTNNA1-234ENST00000522227 USHBP1Q8N6Y0 703 aa15.92■□□□□ 0.14
CTNNA1-234ENST00000522227 IP6K1Q92551 441 aa15.92■□□□□ 0.14
CTNNA1-234ENST00000522227 RNF181Q9P0P0 153 aa15.92■□□□□ 0.14
CTNNA1-234ENST00000522227 MEGF6O75095 1541 aa15.92■□□□□ 0.14
CTNNA1-234ENST00000522227 PCNTO95613 3336 aa15.91■□□□□ 0.14
CTNNA1-234ENST00000522227 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
CTNNA1-234ENST00000522227 DPEP1P16444 411 aa15.91■□□□□ 0.14
CTNNA1-234ENST00000522227 TGFB2P61812 414 aa15.89■□□□□ 0.13
CTNNA1-234ENST00000522227 FAM161AQ3B820 660 aa15.89■□□□□ 0.13
CTNNA1-234ENST00000522227 UBR3Q6ZT12 1888 aa15.88■□□□□ 0.13
CTNNA1-234ENST00000522227 PLEKHG2Q9H7P9 1386 aa15.88■□□□□ 0.13
CTNNA1-234ENST00000522227 RGPD2P0DJD1 1756 aa15.88■□□□□ 0.13
CTNNA1-234ENST00000522227 GNPATO15228 680 aa15.88■□□□□ 0.13
CTNNA1-234ENST00000522227 FBLN1P23142 703 aa15.88■□□□□ 0.13
CTNNA1-234ENST00000522227 SSFA2P28290 1259 aa15.88■□□□□ 0.13
CTNNA1-234ENST00000522227 LINC00116Q8NCU8 138 aa15.88■□□□□ 0.13
CTNNA1-234ENST00000522227 TMC1Q8TDI8 760 aa15.87■□□□□ 0.13
CTNNA1-234ENST00000522227 MON2Q7Z3U7 1717 aa15.87■□□□□ 0.13
CTNNA1-234ENST00000522227 KIAA1551Q9HCM1 1747 aa15.87■□□□□ 0.13
CTNNA1-234ENST00000522227 HMGB2P26583 209 aaKnown RBP15.86■□□□□ 0.13
CTNNA1-234ENST00000522227 AMPHP49418 695 aa15.86■□□□□ 0.13
CTNNA1-234ENST00000522227 PCDH10Q9P2E7 1040 aa15.86■□□□□ 0.13
CTNNA1-234ENST00000522227 SBNO2Q9Y2G9 1366 aa15.86■□□□□ 0.13
CTNNA1-234ENST00000522227 FAM208AQ9UK61 1670 aaKnown RBP15.86■□□□□ 0.13
CTNNA1-234ENST00000522227 PKD1L3Q7Z443 1732 aa15.85■□□□□ 0.13
CTNNA1-234ENST00000522227 HOXC9P31274 260 aa15.85■□□□□ 0.13
CTNNA1-234ENST00000522227 RAPGEF4Q8WZA2 1011 aa15.85■□□□□ 0.13
CTNNA1-234ENST00000522227 SMARCC1Q92922 1105 aaPredicted RBP15.85■□□□□ 0.13
CTNNA1-234ENST00000522227 MKRN1Q9UHC7 482 aaKnown RBP15.85■□□□□ 0.13
CTNNA1-234ENST00000522227 NSD3Q9BZ95 1437 aa15.85■□□□□ 0.13
CTNNA1-234ENST00000522227 FOXN1O15353 648 aa15.84■□□□□ 0.13
CTNNA1-234ENST00000522227 NBPF6Q5VWK0 638 aa15.84■□□□□ 0.13
CTNNA1-234ENST00000522227 NBPF4Q96M43 638 aa15.84■□□□□ 0.13
CTNNA1-234ENST00000522227 HDGFL2Q7Z4V5 671 aaPredicted RBP15.83■□□□□ 0.12
CTNNA1-234ENST00000522227 CCDC87Q9NVE4 849 aa15.83■□□□□ 0.12
CTNNA1-234ENST00000522227 MAP3K19Q56UN5 1328 aa15.83■□□□□ 0.12
CTNNA1-234ENST00000522227 TATP17735 454 aaPredicted RBP15.82■□□□□ 0.12
CTNNA1-234ENST00000522227 C10orf71Q711Q0 1435 aa15.82■□□□□ 0.12
CTNNA1-234ENST00000522227 TNRC6CQ9HCJ0 1690 aaKnown RBP15.82■□□□□ 0.12
CTNNA1-234ENST00000522227 KIF13BQ9NQT8 1826 aa15.82■□□□□ 0.12
CTNNA1-234ENST00000522227 LOC102724428A0A0B4J2F2 783 aa15.81■□□□□ 0.12
CTNNA1-234ENST00000522227 KCNA3P22001 575 aa15.81■□□□□ 0.12
CTNNA1-234ENST00000522227 SIK1P57059 783 aa15.81■□□□□ 0.12
CTNNA1-234ENST00000522227 TMF1P82094 1093 aa15.81■□□□□ 0.12
CTNNA1-234ENST00000522227 PIGBQ92521 554 aa15.81■□□□□ 0.12
CTNNA1-234ENST00000522227 SLC12A5Q9H2X9 1139 aa15.81■□□□□ 0.12
CTNNA1-234ENST00000522227 PCDH11XQ9BZA7 1347 aa15.8■□□□□ 0.12
CTNNA1-234ENST00000522227 PCDH11YQ9BZA8 1340 aa15.8■□□□□ 0.12
CTNNA1-234ENST00000522227 RASSF7Q02833 373 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms