RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TTC21AQ8NDW8 1320 aa19.34■□□□□ 0.69
USP42-207ENST00000521713 MCM2P49736 904 aa19.33■□□□□ 0.69
USP42-207ENST00000521713 ZNF592Q92610 1267 aa19.33■□□□□ 0.69
USP42-207ENST00000521713 TRAK2O60296 914 aa19.33■□□□□ 0.69
USP42-207ENST00000521713 IGHMBP2P38935 993 aaKnown RBP19.33■□□□□ 0.69
USP42-207ENST00000521713 BRPF3Q9ULD4 1205 aa19.33■□□□□ 0.69
USP42-207ENST00000521713 RIMS2Q9UQ26 1411 aa19.33■□□□□ 0.68
USP42-207ENST00000521713 ANKRD20A12PQ8NF67 263 aa19.32■□□□□ 0.68
USP42-207ENST00000521713 USHBP1Q8N6Y0 703 aa19.32■□□□□ 0.68
USP42-207ENST00000521713 EIF4G3O43432 1585 aaKnown RBP19.32■□□□□ 0.68
USP42-207ENST00000521713 SAMD1Q6SPF0 538 aaPredicted RBP19.32■□□□□ 0.68
USP42-207ENST00000521713 MBD3O95983 291 aa19.32■□□□□ 0.68
USP42-207ENST00000521713 IKQ13123 557 aaPredicted RBP19.32■□□□□ 0.68
USP42-207ENST00000521713 HSP90AB3PQ58FF7 597 aa19.31■□□□□ 0.68
USP42-207ENST00000521713 ZPR1O75312 459 aa19.31■□□□□ 0.68
USP42-207ENST00000521713 ALDH1L2Q3SY69 923 aa19.31■□□□□ 0.68
USP42-207ENST00000521713 LETM1O95202 739 aaPredicted RBP19.31■□□□□ 0.68
USP42-207ENST00000521713 IFNL2Q8IZJ0 200 aa19.31■□□□□ 0.68
USP42-207ENST00000521713 CCAR2Q8N163 923 aaKnown RBP19.31■□□□□ 0.68
USP42-207ENST00000521713 ANKRD36BQ8N2N9 1353 aa19.3■□□□□ 0.68
USP42-207ENST00000521713 IL27Q8NEV9 243 aa19.3■□□□□ 0.68
USP42-207ENST00000521713 THUMPD2Q9BTF0 503 aaKnown RBP19.3■□□□□ 0.68
USP42-207ENST00000521713 TEX13AQ9BXU3 409 aaPredicted RBP19.3■□□□□ 0.68
USP42-207ENST00000521713 FMNL2Q96PY5 1086 aa19.3■□□□□ 0.68
USP42-207ENST00000521713 MPRIPQ6WCQ1 1025 aa19.29■□□□□ 0.68
USP42-207ENST00000521713 CCDC73Q6ZRK6 1079 aa19.29■□□□□ 0.68
USP42-207ENST00000521713 C11orf95C9JLR9 678 aaPredicted RBP19.29■□□□□ 0.68
USP42-207ENST00000521713 MIS18AQ9NYP9 233 aa19.29■□□□□ 0.68
USP42-207ENST00000521713 PDCP20941 246 aa19.29■□□□□ 0.68
USP42-207ENST00000521713 BICDL1Q6ZP65 573 aa19.29■□□□□ 0.68
USP42-207ENST00000521713 CTTNBP2Q8WZ74 1663 aa19.28■□□□□ 0.68
USP42-207ENST00000521713 AACSQ86V21 672 aa19.28■□□□□ 0.68
USP42-207ENST00000521713 CALRP27797 417 aaKnown RBP19.28■□□□□ 0.68
USP42-207ENST00000521713 CCDC184Q52MB2 194 aa19.28■□□□□ 0.68
USP42-207ENST00000521713 HOMER1Q86YM7 354 aa19.28■□□□□ 0.68
USP42-207ENST00000521713 DCTN1Q14203 1278 aa19.28■□□□□ 0.68
USP42-207ENST00000521713 RABEP1Q15276 862 aa19.27■□□□□ 0.68
USP42-207ENST00000521713 DBF4Q9UBU7 674 aaPredicted RBP19.27■□□□□ 0.68
USP42-207ENST00000521713 MNS1Q8NEH6 495 aa19.27■□□□□ 0.68
USP42-207ENST00000521713 HYPKQ9NX55 129 aa19.26■□□□□ 0.67
USP42-207ENST00000521713 UBAP1LF5GYI3 381 aa19.26■□□□□ 0.67
USP42-207ENST00000521713 NEK4P51957 841 aa19.26■□□□□ 0.67
USP42-207ENST00000521713 ANKRD24Q8TF21 1146 aa19.26■□□□□ 0.67
USP42-207ENST00000521713 RRP12Q5JTH9 1297 aaKnown RBP19.26■□□□□ 0.67
USP42-207ENST00000521713 PUS7Q96PZ0 661 aaKnown RBP19.26■□□□□ 0.67
USP42-207ENST00000521713 IPO7O95373 1038 aaKnown RBP19.26■□□□□ 0.67
USP42-207ENST00000521713 HSP90B2PQ58FF3 399 aa19.26■□□□□ 0.67
USP42-207ENST00000521713 SASS6Q6UVJ0 657 aa19.25■□□□□ 0.67
USP42-207ENST00000521713 C19orf44Q9H6X5 657 aa19.25■□□□□ 0.67
USP42-207ENST00000521713 MTMR7Q9Y216 660 aa19.25■□□□□ 0.67
USP42-207ENST00000521713 AKAP2Q9Y2D5 859 aa19.25■□□□□ 0.67
USP42-207ENST00000521713 CHD1LQ86WJ1 897 aa19.25■□□□□ 0.67
USP42-207ENST00000521713 KIF21AQ7Z4S6 1674 aa19.24■□□□□ 0.67
USP42-207ENST00000521713 FKBP4Q02790 459 aaKnown RBP eCLIP19.24■□□□□ 0.67
USP42-207ENST00000521713 ZMYM3Q14202 1370 aa19.24■□□□□ 0.67
USP42-207ENST00000521713 CTNNA3Q9UI47 895 aa19.24■□□□□ 0.67
USP42-207ENST00000521713 PTPRKQ15262 1439 aa19.24■□□□□ 0.67
USP42-207ENST00000521713 BACH2Q9BYV9 841 aa19.24■□□□□ 0.67
USP42-207ENST00000521713 ANKRD1Q15327 319 aa19.23■□□□□ 0.67
USP42-207ENST00000521713 TMEM57Q8N5G2 664 aa19.23■□□□□ 0.67
USP42-207ENST00000521713 SHANK2Q9UPX8 1470 aa19.23■□□□□ 0.67
USP42-207ENST00000521713 TCOF1Q13428 1488 aaKnown RBP19.23■□□□□ 0.67
USP42-207ENST00000521713 CDR1P51861 262 aa19.23■□□□□ 0.67
USP42-207ENST00000521713 KIF1BPQ96EK5 621 aa19.23■□□□□ 0.67
USP42-207ENST00000521713 AK7Q96M32 723 aa19.22■□□□□ 0.67
USP42-207ENST00000521713 METTL24Q5JXM2 366 aa19.22■□□□□ 0.67
USP42-207ENST00000521713 TAF3Q5VWG9 929 aa19.22■□□□□ 0.67
USP42-207ENST00000521713 CYP46A1Q9Y6A2 500 aa19.22■□□□□ 0.67
USP42-207ENST00000521713 DISP3Q9P2K9 1392 aa19.22■□□□□ 0.67
USP42-207ENST00000521713 RAB11FIP3O75154 756 aa19.22■□□□□ 0.67
USP42-207ENST00000521713 FOSBP53539 338 aa19.22■□□□□ 0.67
USP42-207ENST00000521713 DHX8Q14562 1220 aaKnown RBP19.22■□□□□ 0.67
USP42-207ENST00000521713 SSH1Q8WYL5 1049 aa19.22■□□□□ 0.67
USP42-207ENST00000521713 TBX22Q9Y458 520 aa19.22■□□□□ 0.67
USP42-207ENST00000521713 DNAAF4Q8WXU2 420 aa19.21■□□□□ 0.67
USP42-207ENST00000521713 MYD88Q99836 296 aa19.21■□□□□ 0.67
USP42-207ENST00000521713 IFIT1P09914 478 aaKnown RBP19.21■□□□□ 0.67
USP42-207ENST00000521713 CCAR1Q8IX12 1150 aaKnown RBP19.21■□□□□ 0.67
USP42-207ENST00000521713 RBM5P52756 815 aaKnown RBP eCLIP19.21■□□□□ 0.67
USP42-207ENST00000521713 RAI14Q9P0K7 980 aa19.21■□□□□ 0.67
USP42-207ENST00000521713 CHRNA2Q15822 529 aa19.2■□□□□ 0.66
USP42-207ENST00000521713 LRP2BPQ9P2M1 347 aa19.2■□□□□ 0.66
USP42-207ENST00000521713 RARSP54136 660 aaKnown RBP19.2■□□□□ 0.66
USP42-207ENST00000521713 ERCC4Q92889 916 aaPredicted RBP19.2■□□□□ 0.66
USP42-207ENST00000521713 PCMTD1Q96MG8 357 aaPredicted RBP19.2■□□□□ 0.66
USP42-207ENST00000521713 IL1RAPL2Q9NP60 686 aa19.2■□□□□ 0.66
USP42-207ENST00000521713 CCDC85AQ96PX6 553 aaPredicted RBP19.19■□□□□ 0.66
USP42-207ENST00000521713 CCP110O43303 1012 aa19.19■□□□□ 0.66
USP42-207ENST00000521713 TRIM22Q8IYM9 498 aa19.19■□□□□ 0.66
USP42-207ENST00000521713 TMOD2Q9NZR1 351 aa19.19■□□□□ 0.66
USP42-207ENST00000521713 TRMT112Q9UI30 125 aaKnown RBP19.18■□□□□ 0.66
USP42-207ENST00000521713 IFIT5Q13325 482 aaKnown RBP19.18■□□□□ 0.66
USP42-207ENST00000521713 CAVIN4Q5BKX8 364 aa19.18■□□□□ 0.66
USP42-207ENST00000521713 NAT10Q9H0A0 1025 aaKnown RBP19.18■□□□□ 0.66
USP42-207ENST00000521713 PPIP5K1Q6PFW1 1433 aa19.18■□□□□ 0.66
USP42-207ENST00000521713 PTPRCP08575 1304 aa19.18■□□□□ 0.66
USP42-207ENST00000521713 RALGAPBQ86X10 1494 aa19.18■□□□□ 0.66
USP42-207ENST00000521713 KRT32Q14532 448 aa19.17■□□□□ 0.66
USP42-207ENST00000521713 GLRX3O76003 335 aaKnown RBP19.17■□□□□ 0.66
USP42-207ENST00000521713 ATP2B2Q01814 1243 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms