RNA–Protein interactions for RNA: ENST00000521209.6

MSRA-206, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 3 BASIC

Gene MSRA, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-206ENST00000521209 MTHFSP49914 203 aa23.53■■□□□ 1.36
MSRA-206ENST00000521209 SPG7Q9UQ90 795 aa23.52■■□□□ 1.36
MSRA-206ENST00000521209 PCDH11XQ9BZA7 1347 aa23.52■■□□□ 1.36
MSRA-206ENST00000521209 PCDH11YQ9BZA8 1340 aa23.52■■□□□ 1.36
MSRA-206ENST00000521209 SBF2Q86WG5 1849 aa23.52■■□□□ 1.36
MSRA-206ENST00000521209 ACSBG1Q96GR2 724 aa23.5■■□□□ 1.35
MSRA-206ENST00000521209 NCAPD2Q15021 1401 aa23.49■■□□□ 1.35
MSRA-206ENST00000521209 EZH2Q15910 746 aaKnown RBP23.48■■□□□ 1.35
MSRA-206ENST00000521209 CFAP53Q96M91 514 aa23.48■■□□□ 1.35
MSRA-206ENST00000521209 IGSF1Q8N6C5 1336 aa23.48■■□□□ 1.35
MSRA-206ENST00000521209 CAMKK2Q96RR4 588 aa23.47■■□□□ 1.35
MSRA-206ENST00000521209 PLSCR1O15162 318 aa23.46■■□□□ 1.35
MSRA-206ENST00000521209 SYTL4Q96C24 671 aaPredicted RBP23.46■■□□□ 1.35
MSRA-206ENST00000521209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.46■■□□□ 1.35
MSRA-206ENST00000521209 PLEKHG2Q9H7P9 1386 aa23.45■■□□□ 1.34
MSRA-206ENST00000521209 DIAPH1O60610 1272 aaKnown RBP23.45■■□□□ 1.34
MSRA-206ENST00000521209 NHSQ6T4R5 1651 aa23.44■■□□□ 1.34
MSRA-206ENST00000521209 KCNQ2O43526 872 aa23.43■■□□□ 1.34
MSRA-206ENST00000521209 IL13P35225 146 aa23.43■■□□□ 1.34
MSRA-206ENST00000521209 NBPF14Q5TI25 921 aa23.43■■□□□ 1.34
MSRA-206ENST00000521209 DDX10Q13206 875 aaKnown RBP23.42■■□□□ 1.34
MSRA-206ENST00000521209 PLEKHO1Q53GL0 409 aaPredicted RBP23.42■■□□□ 1.34
MSRA-206ENST00000521209 SULT6B1Q6IMI4 303 aa23.42■■□□□ 1.34
MSRA-206ENST00000521209 AMOTQ4VCS5 1084 aa23.41■■□□□ 1.34
MSRA-206ENST00000521209 PKD1L3Q7Z443 1732 aa23.41■■□□□ 1.34
MSRA-206ENST00000521209 RGPD3A6NKT7 1758 aaPredicted RBP23.4■■□□□ 1.34
MSRA-206ENST00000521209 RGPD4Q7Z3J3 1758 aa23.4■■□□□ 1.34
MSRA-206ENST00000521209 SHANK3Q9BYB0 1731 aa23.4■■□□□ 1.34
MSRA-206ENST00000521209 PRIM1P49642 420 aaKnown RBP23.4■■□□□ 1.34
MSRA-206ENST00000521209 PTF1AQ7RTS3 328 aa23.4■■□□□ 1.34
MSRA-206ENST00000521209 IFNL2Q8IZJ0 200 aa23.4■■□□□ 1.34
MSRA-206ENST00000521209 CYP27B1O15528 508 aa23.39■■□□□ 1.33
MSRA-206ENST00000521209 U2SURPO15042 1029 aaKnown RBP23.38■■□□□ 1.33
MSRA-206ENST00000521209 NUDCQ9Y266 331 aa23.38■■□□□ 1.33
MSRA-206ENST00000521209 DOT1LQ8TEK3 1739 aa23.37■■□□□ 1.33
MSRA-206ENST00000521209 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
MSRA-206ENST00000521209 PPP2R1AP30153 589 aa23.37■■□□□ 1.33
MSRA-206ENST00000521209 BTAF1O14981 1849 aa23.36■■□□□ 1.33
MSRA-206ENST00000521209 C1orf141Q5JVX7 400 aa23.36■■□□□ 1.33
MSRA-206ENST00000521209 AEBP1Q8IUX7 1158 aa23.36■■□□□ 1.33
MSRA-206ENST00000521209 RREB1Q92766 1687 aa23.35■■□□□ 1.33
MSRA-206ENST00000521209 TXNRD1Q16881 649 aa23.35■■□□□ 1.33
MSRA-206ENST00000521209 ZNF530Q6P9A1 599 aaPredicted RBP23.35■■□□□ 1.33
MSRA-206ENST00000521209 KDRP35968 1356 aa23.35■■□□□ 1.33
MSRA-206ENST00000521209 HMOX1P09601 288 aa23.34■■□□□ 1.33
MSRA-206ENST00000521209 PHKG2P15735 406 aa23.34■■□□□ 1.33
MSRA-206ENST00000521209 NKX1-1Q15270 411 aaPredicted RBP23.33■■□□□ 1.33
MSRA-206ENST00000521209 RALBP1Q15311 655 aa23.33■■□□□ 1.33
MSRA-206ENST00000521209 PSDA5PKW4 1024 aaPredicted RBP23.32■■□□□ 1.32
MSRA-206ENST00000521209 R3HDM1Q15032 1099 aaKnown RBP23.32■■□□□ 1.32
MSRA-206ENST00000521209 MPRIPQ6WCQ1 1025 aa23.32■■□□□ 1.32
MSRA-206ENST00000521209 NUP188Q5SRE5 1749 aa23.31■■□□□ 1.32
MSRA-206ENST00000521209 HMGB2P26583 209 aaKnown RBP23.31■■□□□ 1.32
MSRA-206ENST00000521209 SLC27A3Q5K4L6 730 aa23.3■■□□□ 1.32
MSRA-206ENST00000521209 DCAF5Q96JK2 942 aa23.3■■□□□ 1.32
MSRA-206ENST00000521209 TMOD3Q9NYL9 352 aa23.3■■□□□ 1.32
MSRA-206ENST00000521209 COL3A1P02461 1466 aaPredicted RBP23.3■■□□□ 1.32
MSRA-206ENST00000521209 SMARCC1Q92922 1105 aaPredicted RBP23.29■■□□□ 1.32
MSRA-206ENST00000521209 STK32BQ9NY57 414 aa23.29■■□□□ 1.32
MSRA-206ENST00000521209 ZNF316A6NFI3 1004 aaPredicted RBP23.27■■□□□ 1.32
MSRA-206ENST00000521209 PROM2Q8N271 834 aa23.27■■□□□ 1.32
MSRA-206ENST00000521209 U2AF1L5P0DN76 240 aaPredicted RBP23.26■■□□□ 1.31
MSRA-206ENST00000521209 U2AF1Q01081 240 aaKnown RBP eCLIP23.26■■□□□ 1.31
MSRA-206ENST00000521209 ERVV-2B6SEH9 535 aa23.25■■□□□ 1.31
MSRA-206ENST00000521209 NEFMP07197 916 aa23.25■■□□□ 1.31
MSRA-206ENST00000521209 AKAP4Q5JQC9 854 aa23.24■■□□□ 1.31
MSRA-206ENST00000521209 CCNL1Q9UK58 526 aaPredicted RBP23.24■■□□□ 1.31
MSRA-206ENST00000521209 ITGB4P16144 1822 aa23.24■■□□□ 1.31
MSRA-206ENST00000521209 CABP4P57796 275 aa23.23■■□□□ 1.31
MSRA-206ENST00000521209 PIGBQ92521 554 aa23.23■■□□□ 1.31
MSRA-206ENST00000521209 PALLDQ8WX93 1383 aa23.23■■□□□ 1.31
MSRA-206ENST00000521209 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
MSRA-206ENST00000521209 TOGARAM1Q9Y4F4 1720 aa23.22■■□□□ 1.31
MSRA-206ENST00000521209 MYBBP1AQ9BQG0 1328 aaKnown RBP23.21■■□□□ 1.31
MSRA-206ENST00000521209 SLC15A2Q16348 729 aa23.2■■□□□ 1.3
MSRA-206ENST00000521209 ANO8Q9HCE9 1232 aaPredicted RBP23.2■■□□□ 1.3
MSRA-206ENST00000521209 FCHSD2O94868 740 aa23.19■■□□□ 1.3
MSRA-206ENST00000521209 PRKAR2BP31323 418 aa23.19■■□□□ 1.3
MSRA-206ENST00000521209 MTHFSDQ2M296 383 aaKnown RBP23.18■■□□□ 1.3
MSRA-206ENST00000521209 PNNQ9H307 717 aaKnown RBP23.18■■□□□ 1.3
MSRA-206ENST00000521209 LRRC4BQ9NT99 713 aa23.18■■□□□ 1.3
MSRA-206ENST00000521209 LY75O60449 1722 aa23.18■■□□□ 1.3
MSRA-206ENST00000521209 KDM6AO15550 1401 aaPredicted RBP23.16■■□□□ 1.3
MSRA-206ENST00000521209 RSPH6AQ9H0K4 717 aa23.16■■□□□ 1.3
MSRA-206ENST00000521209 TFCP2L1Q9NZI6 479 aa23.15■■□□□ 1.3
MSRA-206ENST00000521209 GNAT3A8MTJ3 354 aa23.14■■□□□ 1.29
MSRA-206ENST00000521209 KCNQ4P56696 695 aa23.14■■□□□ 1.29
MSRA-206ENST00000521209 ASAP1Q9ULH1 1129 aa23.14■■□□□ 1.29
MSRA-206ENST00000521209 MAP3K5Q99683 1374 aa23.14■■□□□ 1.29
MSRA-206ENST00000521209 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
MSRA-206ENST00000521209 RNMTO43148 476 aaKnown RBP23.13■■□□□ 1.29
MSRA-206ENST00000521209 SIK1P57059 783 aa23.13■■□□□ 1.29
MSRA-206ENST00000521209 NFATC2IPQ8NCF5 419 aa23.13■■□□□ 1.29
MSRA-206ENST00000521209 PRKRIP1Q9H875 184 aaPredicted RBP23.13■■□□□ 1.29
MSRA-206ENST00000521209 SCN11AQ9UI33 1791 aa23.12■■□□□ 1.29
MSRA-206ENST00000521209 RTF1Q92541 710 aaKnown RBP23.12■■□□□ 1.29
MSRA-206ENST00000521209 ATG3Q9NT62 314 aa23.12■■□□□ 1.29
MSRA-206ENST00000521209 PAPPAQ13219 1627 aa23.11■■□□□ 1.29
MSRA-206ENST00000521209 TEFQ10587 303 aa23.11■■□□□ 1.29
MSRA-206ENST00000521209 RBM42Q9BTD8 480 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms