RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 GIGYF1O75420 1035 aaPredicted RBP10.31□□□□□ -0.76
CLK4-207ENST00000520909 GPAT2Q6NUI2 795 aa10.31□□□□□ -0.76
CLK4-207ENST00000520909 WHAMMQ8TF30 809 aa10.31□□□□□ -0.76
CLK4-207ENST00000520909 ATP5J2-PTCD1G3V325 749 aa10.3□□□□□ -0.76
CLK4-207ENST00000520909 DNMT3AQ9Y6K1 912 aaPredicted RBP10.3□□□□□ -0.76
CLK4-207ENST00000520909 ARHGEF15O94989 841 aa10.28□□□□□ -0.76
CLK4-207ENST00000520909 ADAMTS2O95450 1211 aa10.28□□□□□ -0.76
CLK4-207ENST00000520909 IGHA1P01876 353 aa10.28□□□□□ -0.76
CLK4-207ENST00000520909 RHOQP17081 205 aa10.28□□□□□ -0.76
CLK4-207ENST00000520909 MARSP56192 900 aaKnown RBP10.28□□□□□ -0.76
CLK4-207ENST00000520909 RNF20Q5VTR2 975 aa10.28□□□□□ -0.76
CLK4-207ENST00000520909 MEN1O00255 615 aa10.27□□□□□ -0.77
CLK4-207ENST00000520909 FBXO45P0C2W1 286 aa10.27□□□□□ -0.77
CLK4-207ENST00000520909 IRS1P35568 1242 aa10.27□□□□□ -0.77
CLK4-207ENST00000520909 SRSF11Q05519 484 aaKnown RBP10.27□□□□□ -0.77
CLK4-207ENST00000520909 IL27Q8NEV9 243 aa10.27□□□□□ -0.77
CLK4-207ENST00000520909 GMCL1Q96IK5 515 aa10.27□□□□□ -0.77
CLK4-207ENST00000520909 GPC1P35052 558 aa10.26□□□□□ -0.77
CLK4-207ENST00000520909 MCCD1P59942 119 aaPredicted RBP10.26□□□□□ -0.77
CLK4-207ENST00000520909 FOXR1Q6PIV2 292 aa10.26□□□□□ -0.77
CLK4-207ENST00000520909 GJD4Q96KN9 370 aaPredicted RBP10.26□□□□□ -0.77
CLK4-207ENST00000520909 CUEDC1Q9NWM3 386 aaPredicted RBP10.26□□□□□ -0.77
CLK4-207ENST00000520909 A0A1W2PRU2 124 aa10.25□□□□□ -0.77
CLK4-207ENST00000520909 MAP3K10Q02779 954 aa10.25□□□□□ -0.77
CLK4-207ENST00000520909 NEUROD2Q15784 382 aa10.25□□□□□ -0.77
CLK4-207ENST00000520909 CC2D2BQ6DHV5 1058 aa10.25□□□□□ -0.77
CLK4-207ENST00000520909 ZNF592Q92610 1267 aa10.25□□□□□ -0.77
CLK4-207ENST00000520909 NLRP3Q96P20 1036 aa10.24□□□□□ -0.77
CLK4-207ENST00000520909 ERVK-9P63128 1117 aa10.23□□□□□ -0.77
CLK4-207ENST00000520909 SLC27A3Q5K4L6 730 aa10.23□□□□□ -0.77
CLK4-207ENST00000520909 LYPD4Q6UWN0 246 aa10.23□□□□□ -0.77
CLK4-207ENST00000520909 RIPOR1Q6ZS17 1223 aa10.23□□□□□ -0.77
CLK4-207ENST00000520909 TRIM22Q8IYM9 498 aa10.23□□□□□ -0.77
CLK4-207ENST00000520909 SCARF2Q96GP6 870 aaPredicted RBP10.23□□□□□ -0.77
CLK4-207ENST00000520909 ESF1Q9H501 851 aaKnown RBP10.23□□□□□ -0.77
CLK4-207ENST00000520909 ZNF330Q9Y3S2 320 aaPredicted RBP10.23□□□□□ -0.77
CLK4-207ENST00000520909 NR1H3Q13133 447 aa10.22□□□□□ -0.77
CLK4-207ENST00000520909 GAS6Q14393 721 aa10.22□□□□□ -0.77
CLK4-207ENST00000520909 ENAMQ9NRM1 1142 aa10.22□□□□□ -0.77
CLK4-207ENST00000520909 H7C1W4 665 aa10.21□□□□□ -0.78
CLK4-207ENST00000520909 FOXK2Q01167 660 aa10.21□□□□□ -0.78
CLK4-207ENST00000520909 KANK3Q6NY19 840 aa10.21□□□□□ -0.78
CLK4-207ENST00000520909 ZNF837Q96EG3 531 aaPredicted RBP10.21□□□□□ -0.78
CLK4-207ENST00000520909 DYRK1BQ9Y463 629 aa10.21□□□□□ -0.78
CLK4-207ENST00000520909 CELA2BP08218 269 aaPredicted RBP10.2□□□□□ -0.78
CLK4-207ENST00000520909 POU4F2Q12837 409 aa10.2□□□□□ -0.78
CLK4-207ENST00000520909 DBN1Q16643 649 aa10.2□□□□□ -0.78
CLK4-207ENST00000520909 XP32Q5T750 250 aa10.2□□□□□ -0.78
CLK4-207ENST00000520909 CYP2U1Q7Z449 544 aa10.2□□□□□ -0.78
CLK4-207ENST00000520909 MBIPQ9NS73 344 aa10.2□□□□□ -0.78
CLK4-207ENST00000520909 BANK1Q8NDB2 785 aa10.19□□□□□ -0.78
CLK4-207ENST00000520909 GAS2L1Q99501 681 aaPredicted RBP10.19□□□□□ -0.78
CLK4-207ENST00000520909 GRIP2Q9C0E4 1043 aa10.19□□□□□ -0.78
CLK4-207ENST00000520909 CLN3Q13286 438 aa10.18□□□□□ -0.78
CLK4-207ENST00000520909 PCDHB11Q9Y5F2 797 aa10.18□□□□□ -0.78
CLK4-207ENST00000520909 GPR25O00155 361 aa10.17□□□□□ -0.78
CLK4-207ENST00000520909 TRERF1Q96PN7 1200 aa10.17□□□□□ -0.78
CLK4-207ENST00000520909 SCTRP47872 440 aa10.16□□□□□ -0.78
CLK4-207ENST00000520909 WDR44Q5JSH3 913 aa10.16□□□□□ -0.78
CLK4-207ENST00000520909 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
CLK4-207ENST00000520909 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
CLK4-207ENST00000520909 GTPBP3Q969Y2 492 aaKnown RBP10.16□□□□□ -0.78
CLK4-207ENST00000520909 IGF1RP08069 1367 aa10.15□□□□□ -0.78
CLK4-207ENST00000520909 APBB1O00213 710 aa10.15□□□□□ -0.78
CLK4-207ENST00000520909 SPATA31C2B4DYI2 1134 aa10.14□□□□□ -0.79
CLK4-207ENST00000520909 TRAK2O60296 914 aa10.14□□□□□ -0.79
CLK4-207ENST00000520909 OSBPL3Q9H4L5 887 aa10.14□□□□□ -0.79
CLK4-207ENST00000520909 ARHGEF10LQ9HCE6 1279 aa10.14□□□□□ -0.79
CLK4-207ENST00000520909 TIMMDC1Q9NPL8 285 aa10.14□□□□□ -0.79
CLK4-207ENST00000520909 NDUFB9Q9Y6M9 179 aa10.14□□□□□ -0.79
CLK4-207ENST00000520909 SOCS7O14512 581 aa10.13□□□□□ -0.79
CLK4-207ENST00000520909 TAS1R3Q7RTX0 852 aa10.13□□□□□ -0.79
CLK4-207ENST00000520909 F11P03951 625 aa10.12□□□□□ -0.79
CLK4-207ENST00000520909 BCRP11274 1271 aa10.12□□□□□ -0.79
CLK4-207ENST00000520909 NSFL1CQ9UNZ2 370 aaKnown RBP10.12□□□□□ -0.79
CLK4-207ENST00000520909 WASLO00401 505 aaPredicted RBP10.11□□□□□ -0.79
CLK4-207ENST00000520909 GNRH1P01148 92 aa10.11□□□□□ -0.79
CLK4-207ENST00000520909 BEND7Q8N7W2 519 aaPredicted RBP10.11□□□□□ -0.79
CLK4-207ENST00000520909 MTMR14Q8NCE2 650 aa10.11□□□□□ -0.79
CLK4-207ENST00000520909 NEDD1Q8NHV4 660 aa10.11□□□□□ -0.79
CLK4-207ENST00000520909 NUCKS1Q9H1E3 243 aaKnown RBP10.11□□□□□ -0.79
CLK4-207ENST00000520909 PHF20L1A8MW92 1017 aa10.1□□□□□ -0.79
CLK4-207ENST00000520909 MYCP01106 439 aaPredicted RBP10.1□□□□□ -0.79
CLK4-207ENST00000520909 MX2P20592 715 aa10.1□□□□□ -0.79
CLK4-207ENST00000520909 CNKSR1Q969H4 720 aa10.1□□□□□ -0.79
CLK4-207ENST00000520909 ADAM23O75077 832 aa10.09□□□□□ -0.79
CLK4-207ENST00000520909 ESYT1Q9BSJ8 1104 aa10.09□□□□□ -0.79
CLK4-207ENST00000520909 RAB6BQ9NRW1 208 aa10.09□□□□□ -0.79
CLK4-207ENST00000520909 CEP126Q9P2H0 1117 aa10.09□□□□□ -0.79
CLK4-207ENST00000520909 BRPF1P55201 1214 aaPredicted RBP10.08□□□□□ -0.8
CLK4-207ENST00000520909 CENPCQ03188 943 aa10.08□□□□□ -0.8
CLK4-207ENST00000520909 PODNQ7Z5L7 613 aa10.08□□□□□ -0.8
CLK4-207ENST00000520909 ACDQ96AP0 544 aa10.08□□□□□ -0.8
CLK4-207ENST00000520909 SNRKQ9NRH2 765 aa10.08□□□□□ -0.8
CLK4-207ENST00000520909 CNTNAP5Q8WYK1 1306 aa10.08□□□□□ -0.8
CLK4-207ENST00000520909 GPR37L1O60883 481 aa10.07□□□□□ -0.8
CLK4-207ENST00000520909 GTF2E1P29083 439 aaPredicted RBP10.07□□□□□ -0.8
CLK4-207ENST00000520909 LRRC4BQ9NT99 713 aa10.07□□□□□ -0.8
CLK4-207ENST00000520909 MSTNO14793 375 aa10.07□□□□□ -0.8
CLK4-207ENST00000520909 ZSCAN10Q96SZ4 725 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms