RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ALDH1A1P00352 501 aa6.99□□□□□ -1.29
SDC2-204ENST00000519914 FDX1P10109 184 aa6.99□□□□□ -1.29
SDC2-204ENST00000519914 SNRPBP14678 240 aaKnown RBP6.99□□□□□ -1.29
SDC2-204ENST00000519914 SSTR3P32745 418 aaPredicted RBP6.99□□□□□ -1.29
SDC2-204ENST00000519914 E9PCH4 1651 aa6.98□□□□□ -1.29
SDC2-204ENST00000519914 KIF15Q9NS87 1388 aa6.98□□□□□ -1.29
SDC2-204ENST00000519914 ARID3CA6NKF2 412 aa6.98□□□□□ -1.29
SDC2-204ENST00000519914 NDUFV2P19404 249 aa6.98□□□□□ -1.29
SDC2-204ENST00000519914 NUDT12Q9BQG2 462 aa6.98□□□□□ -1.29
SDC2-204ENST00000519914 HIRIP3Q9BW71 556 aaPredicted RBP6.98□□□□□ -1.29
SDC2-204ENST00000519914 PCDHGC3Q9UN70 934 aa6.98□□□□□ -1.29
SDC2-204ENST00000519914 FAM135AQ9P2D6 1515 aa6.98□□□□□ -1.29
SDC2-204ENST00000519914 ROCK2O75116 1388 aaKnown RBP6.97□□□□□ -1.29
SDC2-204ENST00000519914 DUOX2Q9NRD8 1548 aa6.97□□□□□ -1.29
SDC2-204ENST00000519914 LCE2AQ5TA79 106 aaPredicted RBP6.97□□□□□ -1.29
SDC2-204ENST00000519914 RETREG3Q86VR2 466 aa6.97□□□□□ -1.29
SDC2-204ENST00000519914 PRKRIP1Q9H875 184 aaPredicted RBP6.97□□□□□ -1.29
SDC2-204ENST00000519914 ZCCHC11Q5TAX3 1644 aaKnown RBP6.96□□□□□ -1.3
SDC2-204ENST00000519914 TRPM1Q7Z4N2 1603 aa6.96□□□□□ -1.3
SDC2-204ENST00000519914 GPRASP1Q5JY77 1395 aa6.96□□□□□ -1.3
SDC2-204ENST00000519914 DHX29Q7Z478 1369 aaKnown RBP6.96□□□□□ -1.3
SDC2-204ENST00000519914 SYCP2Q9BX26 1530 aa6.96□□□□□ -1.3
SDC2-204ENST00000519914 TSPY4P0CV99 314 aa6.96□□□□□ -1.3
SDC2-204ENST00000519914 TSPY10P0CW01 314 aa6.96□□□□□ -1.3
SDC2-204ENST00000519914 WNT7BP56706 349 aa6.96□□□□□ -1.3
SDC2-204ENST00000519914 TTLL12Q14166 644 aaPredicted RBP6.96□□□□□ -1.3
SDC2-204ENST00000519914 ERICH6BQ5W0A0 696 aa6.96□□□□□ -1.3
SDC2-204ENST00000519914 EHBP1Q8NDI1 1231 aa6.96□□□□□ -1.3
SDC2-204ENST00000519914 SPIRE2Q8WWL2 714 aa6.96□□□□□ -1.3
SDC2-204ENST00000519914 ERBINQ96RT1 1412 aa6.96□□□□□ -1.3
SDC2-204ENST00000519914 KIF7Q2M1P5 1343 aa6.95□□□□□ -1.3
SDC2-204ENST00000519914 ABCC1P33527 1531 aa6.95□□□□□ -1.3
SDC2-204ENST00000519914 NUP155O75694 1391 aa6.95□□□□□ -1.3
SDC2-204ENST00000519914 USP47Q96K76 1375 aa6.95□□□□□ -1.3
SDC2-204ENST00000519914 NEURL4Q96JN8 1562 aa6.95□□□□□ -1.3
SDC2-204ENST00000519914 EIF2AK4Q9P2K8 1649 aaKnown RBP6.95□□□□□ -1.3
SDC2-204ENST00000519914 KTN1Q86UP2 1357 aaKnown RBP6.94□□□□□ -1.3
SDC2-204ENST00000519914 ERCC6L2Q5T890 1561 aa6.94□□□□□ -1.3
SDC2-204ENST00000519914 RTEL1-TNFRSF6BF6WH68 1400 aa6.94□□□□□ -1.3
SDC2-204ENST00000519914 PLCH2O75038 1416 aa6.94□□□□□ -1.3
SDC2-204ENST00000519914 DEPDC5O75140 1603 aa6.94□□□□□ -1.3
SDC2-204ENST00000519914 MOXD2PA6NHM9 499 aa6.94□□□□□ -1.3
SDC2-204ENST00000519914 MS4A1P11836 297 aa6.94□□□□□ -1.3
SDC2-204ENST00000519914 NFX1Q12986 1120 aaKnown RBP6.94□□□□□ -1.3
SDC2-204ENST00000519914 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
SDC2-204ENST00000519914 BCL11AQ9H165 835 aa6.94□□□□□ -1.3
SDC2-204ENST00000519914 WASF2Q9Y6W5 498 aa6.94□□□□□ -1.3
SDC2-204ENST00000519914 PLA2R1Q13018 1463 aa6.94□□□□□ -1.3
SDC2-204ENST00000519914 ARHGAP5Q13017 1502 aa6.93□□□□□ -1.3
SDC2-204ENST00000519914 RNF17Q9BXT8 1623 aaKnown RBP6.93□□□□□ -1.3
SDC2-204ENST00000519914 WDR7Q9Y4E6 1490 aa6.93□□□□□ -1.3
SDC2-204ENST00000519914 SH3BP2P78314 561 aa6.93□□□□□ -1.3
SDC2-204ENST00000519914 TRIM47Q96LD4 638 aa6.93□□□□□ -1.3
SDC2-204ENST00000519914 SENP2Q9HC62 589 aa6.93□□□□□ -1.3
SDC2-204ENST00000519914 ZNF777Q9ULD5 760 aaPredicted RBP6.93□□□□□ -1.3
SDC2-204ENST00000519914 PRDM15P57071 1507 aaPredicted RBP6.93□□□□□ -1.3
SDC2-204ENST00000519914 ZBED9Q6R2W3 1325 aa6.93□□□□□ -1.3
SDC2-204ENST00000519914 PRAG1Q86YV5 1406 aa6.92□□□□□ -1.3
SDC2-204ENST00000519914 SIAH2O43255 324 aa6.92□□□□□ -1.3
SDC2-204ENST00000519914 CCNYL3P0C7X3 344 aa6.92□□□□□ -1.3
SDC2-204ENST00000519914 PRKCSHP14314 528 aaPredicted RBP6.92□□□□□ -1.3
SDC2-204ENST00000519914 PRR7Q8TB68 274 aa6.92□□□□□ -1.3
SDC2-204ENST00000519914 BAP1Q92560 729 aa6.92□□□□□ -1.3
SDC2-204ENST00000519914 ABCA9Q8IUA7 1624 aa6.92□□□□□ -1.3
SDC2-204ENST00000519914 ZMYM4Q5VZL5 1548 aa6.91□□□□□ -1.3
SDC2-204ENST00000519914 VWDEQ8N2E2 1590 aa6.91□□□□□ -1.3
SDC2-204ENST00000519914 BMP1P13497 986 aa6.91□□□□□ -1.3
SDC2-204ENST00000519914 HNRNPMP52272 730 aaKnown RBP eCLIP6.91□□□□□ -1.3
SDC2-204ENST00000519914 BARGINQ6ZT62 677 aa6.91□□□□□ -1.3
SDC2-204ENST00000519914 UNC93B1Q9H1C4 597 aa6.91□□□□□ -1.3
SDC2-204ENST00000519914 INSRP06213 1382 aa6.91□□□□□ -1.3
SDC2-204ENST00000519914 A2MP01023 1474 aa6.9□□□□□ -1.3
SDC2-204ENST00000519914 TERTO14746 1132 aaKnown RBP6.9□□□□□ -1.3
SDC2-204ENST00000519914 CAPN5O15484 640 aaPredicted RBP6.9□□□□□ -1.3
SDC2-204ENST00000519914 NEFLP07196 543 aa6.9□□□□□ -1.3
SDC2-204ENST00000519914 GIGYF2Q6Y7W6 1299 aaKnown RBP6.9□□□□□ -1.3
SDC2-204ENST00000519914 BEGAINQ9BUH8 593 aa6.9□□□□□ -1.3
SDC2-204ENST00000519914 CCDC144AA2RUR9 1427 aa6.9□□□□□ -1.31
SDC2-204ENST00000519914 ZFYVE16Q7Z3T8 1539 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 INO80Q9ULG1 1556 aaPredicted RBP6.89□□□□□ -1.31
SDC2-204ENST00000519914 CEP152O94986 1710 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 KIAA1210Q9ULL0 1709 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 ZMYND10O75800 440 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 CTHP32929 405 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 KCNH2Q12809 1159 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 MTMR2Q13614 643 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 ZC3H15Q8WU90 426 aaKnown RBP6.89□□□□□ -1.31
SDC2-204ENST00000519914 KIFC2Q96AC6 838 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 EVA1BQ9NVM1 165 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 PTPRTO14522 1441 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 COL17A1Q9UMD9 1497 aaPredicted RBP6.89□□□□□ -1.31
SDC2-204ENST00000519914 TRPM2O94759 1503 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 TET3O43151 1660 aa6.89□□□□□ -1.31
SDC2-204ENST00000519914 SPHKAPQ2M3C7 1700 aa6.88□□□□□ -1.31
SDC2-204ENST00000519914 HNRNPUQ00839 825 aaKnown RBP eCLIP6.88□□□□□ -1.31
SDC2-204ENST00000519914 PTPRNQ16849 979 aa6.88□□□□□ -1.31
SDC2-204ENST00000519914 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
SDC2-204ENST00000519914 PCDHB15Q9Y5E8 787 aa6.88□□□□□ -1.31
SDC2-204ENST00000519914 TLL2Q9Y6L7 1015 aa6.88□□□□□ -1.31
SDC2-204ENST00000519914 LRPPRCP42704 1394 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms