RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 PDZRN3Q9UPQ7 1066 aa10.68□□□□□ -0.7
HMGB4-203ENST00000519684 KIAA0232Q92628 1395 aa10.68□□□□□ -0.7
HMGB4-203ENST00000519684 KIF1AQ12756 1690 aa10.68□□□□□ -0.7
HMGB4-203ENST00000519684 PROSER2Q86WR7 435 aaPredicted RBP10.68□□□□□ -0.7
HMGB4-203ENST00000519684 KCNH5Q8NCM2 988 aa10.68□□□□□ -0.7
HMGB4-203ENST00000519684 ZBTB40Q9NUA8 1239 aa10.68□□□□□ -0.7
HMGB4-203ENST00000519684 NFAT5O94916 1531 aa10.67□□□□□ -0.7
HMGB4-203ENST00000519684 CRB1P82279 1406 aa10.67□□□□□ -0.7
HMGB4-203ENST00000519684 LTV1Q96GA3 475 aaPredicted RBP10.67□□□□□ -0.7
HMGB4-203ENST00000519684 HTATSF1O43719 755 aaKnown RBP10.67□□□□□ -0.7
HMGB4-203ENST00000519684 ABCC4O15439 1325 aa10.66□□□□□ -0.7
HMGB4-203ENST00000519684 IP6K1Q92551 441 aa10.66□□□□□ -0.7
HMGB4-203ENST00000519684 LRRC37A3O60309 1634 aa10.65□□□□□ -0.7
HMGB4-203ENST00000519684 PHRF1Q9P1Y6 1649 aaKnown RBP10.65□□□□□ -0.7
HMGB4-203ENST00000519684 ZBTB7CA1YPR0 619 aa10.65□□□□□ -0.7
HMGB4-203ENST00000519684 FOXO3O43524 673 aa10.65□□□□□ -0.7
HMGB4-203ENST00000519684 TSPYL4Q9UJ04 414 aa10.65□□□□□ -0.7
HMGB4-203ENST00000519684 GNAT3A8MTJ3 354 aa10.64□□□□□ -0.71
HMGB4-203ENST00000519684 MAP3K5Q99683 1374 aa10.64□□□□□ -0.71
HMGB4-203ENST00000519684 ORAI2Q96SN7 254 aa10.64□□□□□ -0.71
HMGB4-203ENST00000519684 ZBTB7BO15156 539 aaPredicted RBP10.63□□□□□ -0.71
HMGB4-203ENST00000519684 SLIT3O75094 1523 aa10.63□□□□□ -0.71
HMGB4-203ENST00000519684 TRPM3Q9HCF6 1732 aaPredicted RBP10.63□□□□□ -0.71
HMGB4-203ENST00000519684 PTPRCP08575 1304 aa10.63□□□□□ -0.71
HMGB4-203ENST00000519684 LMOD2Q6P5Q4 547 aa10.63□□□□□ -0.71
HMGB4-203ENST00000519684 SMC5Q8IY18 1101 aa10.63□□□□□ -0.71
HMGB4-203ENST00000519684 C19orf44Q9H6X5 657 aa10.63□□□□□ -0.71
HMGB4-203ENST00000519684 C1orf167Q5SNV9 1468 aa10.62□□□□□ -0.71
HMGB4-203ENST00000519684 KRT24Q2M2I5 525 aa10.62□□□□□ -0.71
HMGB4-203ENST00000519684 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
HMGB4-203ENST00000519684 XPCQ01831 940 aaPredicted RBP10.62□□□□□ -0.71
HMGB4-203ENST00000519684 MIS18AQ9NYP9 233 aa10.62□□□□□ -0.71
HMGB4-203ENST00000519684 ATF3P18847 181 aa10.61□□□□□ -0.71
HMGB4-203ENST00000519684 KRT28Q7Z3Y7 464 aa10.61□□□□□ -0.71
HMGB4-203ENST00000519684 USHBP1Q8N6Y0 703 aa10.61□□□□□ -0.71
HMGB4-203ENST00000519684 UPF2Q9HAU5 1272 aaKnown RBP10.61□□□□□ -0.71
HMGB4-203ENST00000519684 GCC1Q96CN9 775 aa10.61□□□□□ -0.71
HMGB4-203ENST00000519684 MSH6P52701 1360 aa10.6□□□□□ -0.71
HMGB4-203ENST00000519684 GCP02774 474 aa10.6□□□□□ -0.71
HMGB4-203ENST00000519684 INTS3Q68E01 1043 aaKnown RBP10.6□□□□□ -0.71
HMGB4-203ENST00000519684 STK31Q9BXU1 1019 aa10.6□□□□□ -0.71
HMGB4-203ENST00000519684 BABAM1Q9NWV8 329 aa10.6□□□□□ -0.71
HMGB4-203ENST00000519684 RGPD2P0DJD1 1756 aa10.6□□□□□ -0.71
HMGB4-203ENST00000519684 DCCP43146 1447 aa10.6□□□□□ -0.71
HMGB4-203ENST00000519684 SOS1Q07889 1333 aaPredicted RBP10.6□□□□□ -0.71
HMGB4-203ENST00000519684 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
HMGB4-203ENST00000519684 NUCB1Q02818 461 aa10.59□□□□□ -0.71
HMGB4-203ENST00000519684 C1orf115Q9H7X2 142 aa10.59□□□□□ -0.71
HMGB4-203ENST00000519684 FAM208AQ9UK61 1670 aaKnown RBP10.59□□□□□ -0.71
HMGB4-203ENST00000519684 NCOA3Q9Y6Q9 1424 aa10.59□□□□□ -0.71
HMGB4-203ENST00000519684 USP19O94966 1318 aa10.59□□□□□ -0.71
HMGB4-203ENST00000519684 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
HMGB4-203ENST00000519684 TAF7Q15545 349 aaPredicted RBP10.59□□□□□ -0.71
HMGB4-203ENST00000519684 NBPF6Q5VWK0 638 aa10.59□□□□□ -0.71
HMGB4-203ENST00000519684 NBPF4Q96M43 638 aa10.59□□□□□ -0.71
HMGB4-203ENST00000519684 TMEM94Q12767 1356 aa10.59□□□□□ -0.71
HMGB4-203ENST00000519684 STRCP1A6NGW2 1772 aa10.58□□□□□ -0.72
HMGB4-203ENST00000519684 ARHGEF25Q86VW2 580 aa10.58□□□□□ -0.72
HMGB4-203ENST00000519684 RGS12O14924 1447 aa10.58□□□□□ -0.72
HMGB4-203ENST00000519684 LMO7Q8WWI1 1683 aa10.58□□□□□ -0.72
HMGB4-203ENST00000519684 ALS2Q96Q42 1657 aa10.58□□□□□ -0.72
HMGB4-203ENST00000519684 MST1RQ04912 1400 aa10.58□□□□□ -0.72
HMGB4-203ENST00000519684 CCDC30Q5VVM6 783 aa10.58□□□□□ -0.72
HMGB4-203ENST00000519684 CHD1LQ86WJ1 897 aa10.58□□□□□ -0.72
HMGB4-203ENST00000519684 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
HMGB4-203ENST00000519684 IL17REQ8NFR9 667 aa10.57□□□□□ -0.72
HMGB4-203ENST00000519684 ANKRD45Q5TZF3 282 aa10.57□□□□□ -0.72
HMGB4-203ENST00000519684 ANKRD24Q8TF21 1146 aa10.57□□□□□ -0.72
HMGB4-203ENST00000519684 LNPKQ9C0E8 428 aa10.57□□□□□ -0.72
HMGB4-203ENST00000519684 CAMTA1Q9Y6Y1 1673 aa10.57□□□□□ -0.72
HMGB4-203ENST00000519684 CCT4P50991 539 aaKnown RBP10.56□□□□□ -0.72
HMGB4-203ENST00000519684 AMOTQ4VCS5 1084 aa10.56□□□□□ -0.72
HMGB4-203ENST00000519684 LRRC59Q96AG4 307 aaKnown RBP10.56□□□□□ -0.72
HMGB4-203ENST00000519684 CACNA1FO60840 1977 aa10.56□□□□□ -0.72
HMGB4-203ENST00000519684 ZNF530Q6P9A1 599 aaPredicted RBP10.56□□□□□ -0.72
HMGB4-203ENST00000519684 CADPS2Q86UW7 1296 aa10.56□□□□□ -0.72
HMGB4-203ENST00000519684 NCAPD2Q15021 1401 aa10.55□□□□□ -0.72
HMGB4-203ENST00000519684 MED1Q15648 1581 aaPredicted RBP10.55□□□□□ -0.72
HMGB4-203ENST00000519684 CEMIPQ8WUJ3 1361 aa10.55□□□□□ -0.72
HMGB4-203ENST00000519684 SEC24BO95487 1268 aa10.55□□□□□ -0.72
HMGB4-203ENST00000519684 AKAP4Q5JQC9 854 aa10.55□□□□□ -0.72
HMGB4-203ENST00000519684 C1orf141Q5JVX7 400 aa10.55□□□□□ -0.72
HMGB4-203ENST00000519684 CHMP4AQ9BY43 222 aa10.55□□□□□ -0.72
HMGB4-203ENST00000519684 TEFQ10587 303 aa10.55□□□□□ -0.72
HMGB4-203ENST00000519684 SLC4A10Q6U841 1118 aa10.55□□□□□ -0.72
HMGB4-203ENST00000519684 RPAP2Q8IXW5 612 aaPredicted RBP10.55□□□□□ -0.72
HMGB4-203ENST00000519684 KDM3BQ7LBC6 1761 aa10.55□□□□□ -0.72
HMGB4-203ENST00000519684 NPHP3Q7Z494 1330 aa10.54□□□□□ -0.72
HMGB4-203ENST00000519684 RGPD5Q99666 1765 aa10.54□□□□□ -0.72
HMGB4-203ENST00000519684 SIRT2Q8IXJ6 389 aa10.54□□□□□ -0.72
HMGB4-203ENST00000519684 ANKRD44Q8N8A2 993 aa10.54□□□□□ -0.72
HMGB4-203ENST00000519684 HSPA2P54652 639 aa10.53□□□□□ -0.72
HMGB4-203ENST00000519684 NBR1Q14596 966 aa10.53□□□□□ -0.72
HMGB4-203ENST00000519684 G2E3Q7L622 706 aa10.53□□□□□ -0.72
HMGB4-203ENST00000519684 OVOS2A0A0G2JMS6 1433 aa10.53□□□□□ -0.72
HMGB4-203ENST00000519684 N4BP2Q86UW6 1770 aaPredicted RBP10.53□□□□□ -0.72
HMGB4-203ENST00000519684 FLIIQ13045 1269 aa10.53□□□□□ -0.72
HMGB4-203ENST00000519684 FKBP5Q13451 457 aaPredicted RBP10.53□□□□□ -0.72
HMGB4-203ENST00000519684 BECN1Q14457 450 aa10.53□□□□□ -0.72
HMGB4-203ENST00000519684 NECTIN2Q92692 538 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms