RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 IGSF3O75054 1194 aa13.87□□□□□ -0.19
SPIDR-211ENST00000519401 CYP2E1P05181 493 aaPredicted RBP13.87□□□□□ -0.19
SPIDR-211ENST00000519401 FAM184AQ8NB25 1140 aa13.87□□□□□ -0.19
SPIDR-211ENST00000519401 TPM3P06753 285 aa13.86□□□□□ -0.19
SPIDR-211ENST00000519401 WDR43Q15061 677 aaKnown RBP eCLIP13.86□□□□□ -0.19
SPIDR-211ENST00000519401 KRT222Q8N1A0 295 aa13.86□□□□□ -0.19
SPIDR-211ENST00000519401 JARID2Q92833 1246 aaPredicted RBP13.86□□□□□ -0.19
SPIDR-211ENST00000519401 RAD50Q92878 1312 aa13.86□□□□□ -0.19
SPIDR-211ENST00000519401 IQSEC2Q5JU85 1478 aa13.86□□□□□ -0.19
SPIDR-211ENST00000519401 MBD3O95983 291 aa13.86□□□□□ -0.19
SPIDR-211ENST00000519401 CDCA8Q53HL2 280 aa13.85□□□□□ -0.19
SPIDR-211ENST00000519401 FAM53CQ9NYF3 392 aa13.85□□□□□ -0.19
SPIDR-211ENST00000519401 COG6Q9Y2V7 657 aa13.85□□□□□ -0.19
SPIDR-211ENST00000519401 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
SPIDR-211ENST00000519401 SAMD1Q6SPF0 538 aaPredicted RBP13.84□□□□□ -0.19
SPIDR-211ENST00000519401 TESK2Q96S53 571 aa13.84□□□□□ -0.19
SPIDR-211ENST00000519401 PCDHB15Q9Y5E8 787 aa13.84□□□□□ -0.19
SPIDR-211ENST00000519401 PIK3C2GO75747 1445 aa13.84□□□□□ -0.19
SPIDR-211ENST00000519401 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
SPIDR-211ENST00000519401 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
SPIDR-211ENST00000519401 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
SPIDR-211ENST00000519401 APPP05067 770 aa13.84□□□□□ -0.19
SPIDR-211ENST00000519401 DISP3Q9P2K9 1392 aa13.83□□□□□ -0.19
SPIDR-211ENST00000519401 MCTP1Q6DN14 999 aa13.83□□□□□ -0.2
SPIDR-211ENST00000519401 BRMS1Q9HCU9 246 aa13.83□□□□□ -0.2
SPIDR-211ENST00000519401 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.2
SPIDR-211ENST00000519401 KCNA6P17658 529 aa13.83□□□□□ -0.2
SPIDR-211ENST00000519401 NCBP1Q09161 790 aaKnown RBP13.83□□□□□ -0.2
SPIDR-211ENST00000519401 CWC22Q9HCG8 908 aaKnown RBP13.83□□□□□ -0.2
SPIDR-211ENST00000519401 TBX22Q9Y458 520 aa13.83□□□□□ -0.2
SPIDR-211ENST00000519401 NWD1Q149M9 1564 aa13.82□□□□□ -0.2
SPIDR-211ENST00000519401 RGL3Q3MIN7 710 aa13.82□□□□□ -0.2
SPIDR-211ENST00000519401 AEBP1Q8IUX7 1158 aa13.82□□□□□ -0.2
SPIDR-211ENST00000519401 KIF18AQ8NI77 898 aa13.82□□□□□ -0.2
SPIDR-211ENST00000519401 KIF2CQ99661 725 aa13.82□□□□□ -0.2
SPIDR-211ENST00000519401 DIP2AQ14689 1571 aa13.82□□□□□ -0.2
SPIDR-211ENST00000519401 HSP90B1P14625 803 aaKnown RBP13.81□□□□□ -0.2
SPIDR-211ENST00000519401 PANK1Q8TE04 598 aa13.81□□□□□ -0.2
SPIDR-211ENST00000519401 TSPY26PQ9H489 355 aa13.81□□□□□ -0.2
SPIDR-211ENST00000519401 RPGRIP1LQ68CZ1 1315 aa13.81□□□□□ -0.2
SPIDR-211ENST00000519401 CERS3Q8IU89 383 aa13.81□□□□□ -0.2
SPIDR-211ENST00000519401 CEP120Q8N960 986 aa13.81□□□□□ -0.2
SPIDR-211ENST00000519401 GPT2Q8TD30 523 aa13.81□□□□□ -0.2
SPIDR-211ENST00000519401 MYCBPQ99417 103 aaPredicted RBP13.81□□□□□ -0.2
SPIDR-211ENST00000519401 PPLO60437 1756 aa13.8□□□□□ -0.2
SPIDR-211ENST00000519401 NOP2P46087 812 aaKnown RBP13.8□□□□□ -0.2
SPIDR-211ENST00000519401 HDAC1Q13547 482 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-211ENST00000519401 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-211ENST00000519401 SYAP1Q96A49 352 aaPredicted RBP13.8□□□□□ -0.2
SPIDR-211ENST00000519401 PHF14O94880 888 aa13.79□□□□□ -0.2
SPIDR-211ENST00000519401 REC8O95072 547 aa13.79□□□□□ -0.2
SPIDR-211ENST00000519401 CYP2C19P33261 490 aa13.79□□□□□ -0.2
SPIDR-211ENST00000519401 TNNT3P45378 269 aaPredicted RBP13.79□□□□□ -0.2
SPIDR-211ENST00000519401 CC2D1BQ5T0F9 858 aaKnown RBP13.79□□□□□ -0.2
SPIDR-211ENST00000519401 KIAA1524Q8TCG1 905 aa13.79□□□□□ -0.2
SPIDR-211ENST00000519401 NCAPGQ9BPX3 1015 aa13.79□□□□□ -0.2
SPIDR-211ENST00000519401 PTPRUQ92729 1446 aa13.79□□□□□ -0.2
SPIDR-211ENST00000519401 UBAP1LF5GYI3 381 aa13.79□□□□□ -0.2
SPIDR-211ENST00000519401 MUM1L1Q5H9M0 696 aa13.79□□□□□ -0.2
SPIDR-211ENST00000519401 GAS2L2Q8NHY3 880 aa13.79□□□□□ -0.2
SPIDR-211ENST00000519401 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
SPIDR-211ENST00000519401 TMEM63CQ9P1W3 806 aa13.79□□□□□ -0.2
SPIDR-211ENST00000519401 METP08581 1390 aa13.78□□□□□ -0.2
SPIDR-211ENST00000519401 ANKRD36BQ8N2N9 1353 aa13.78□□□□□ -0.2
SPIDR-211ENST00000519401 HOMEZQ8IX15 550 aa13.78□□□□□ -0.2
SPIDR-211ENST00000519401 TMEM94Q12767 1356 aa13.78□□□□□ -0.2
SPIDR-211ENST00000519401 ADGRF5Q8IZF2 1346 aa13.78□□□□□ -0.2
SPIDR-211ENST00000519401 SYCE3A1L190 88 aa13.78□□□□□ -0.2
SPIDR-211ENST00000519401 SMTNL1A8MU46 457 aa13.78□□□□□ -0.2
SPIDR-211ENST00000519401 RASSF4Q9H2L5 321 aa13.78□□□□□ -0.2
SPIDR-211ENST00000519401 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
SPIDR-211ENST00000519401 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
SPIDR-211ENST00000519401 PROSER2Q86WR7 435 aaPredicted RBP13.77□□□□□ -0.21
SPIDR-211ENST00000519401 CNKSR2Q8WXI2 1034 aa13.77□□□□□ -0.21
SPIDR-211ENST00000519401 ALKQ9UM73 1620 aa13.77□□□□□ -0.21
SPIDR-211ENST00000519401 XIRP1Q702N8 1843 aaKnown RBP13.77□□□□□ -0.21
SPIDR-211ENST00000519401 IFT172Q9UG01 1749 aa13.77□□□□□ -0.21
SPIDR-211ENST00000519401 PIK3R4Q99570 1358 aa13.77□□□□□ -0.21
SPIDR-211ENST00000519401 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
SPIDR-211ENST00000519401 BRPF1P55201 1214 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-211ENST00000519401 RAD51AP2Q09MP3 1159 aa13.76□□□□□ -0.21
SPIDR-211ENST00000519401 GTF2A1P52655 376 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-211ENST00000519401 SLFNL1Q499Z3 407 aa13.76□□□□□ -0.21
SPIDR-211ENST00000519401 ICE2Q659A1 982 aa13.76□□□□□ -0.21
SPIDR-211ENST00000519401 ZNF397Q8NF99 534 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-211ENST00000519401 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
SPIDR-211ENST00000519401 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
SPIDR-211ENST00000519401 CNPY4Q8N129 248 aa13.75□□□□□ -0.21
SPIDR-211ENST00000519401 SMC4Q9NTJ3 1288 aa13.75□□□□□ -0.21
SPIDR-211ENST00000519401 KCNG1Q9UIX4 513 aa13.75□□□□□ -0.21
SPIDR-211ENST00000519401 SETD1AO15047 1707 aaKnown RBP13.75□□□□□ -0.21
SPIDR-211ENST00000519401 PRPF40AO75400 957 aaKnown RBP13.75□□□□□ -0.21
SPIDR-211ENST00000519401 TMF1P82094 1093 aa13.75□□□□□ -0.21
SPIDR-211ENST00000519401 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
SPIDR-211ENST00000519401 PAXBP1Q9Y5B6 917 aa13.75□□□□□ -0.21
SPIDR-211ENST00000519401 DHX16O60231 1041 aaKnown RBP13.74□□□□□ -0.21
SPIDR-211ENST00000519401 CD2BP2O95400 341 aaKnown RBP13.74□□□□□ -0.21
SPIDR-211ENST00000519401 MYCNP04198 464 aaPredicted RBP13.74□□□□□ -0.21
SPIDR-211ENST00000519401 HNRNPH2P55795 449 aaKnown RBP13.74□□□□□ -0.21
SPIDR-211ENST00000519401 LMOD3Q0VAK6 560 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms