RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	MEGF6	O75095	1541 aa		33.02	■■■□□ 2.88
CNOT7-204	ENST00000518885	R3HDM1	Q15032	1099 aa	Known RBP	33.01	■■■□□ 2.87
CNOT7-204	ENST00000518885	ACSBG1	Q96GR2	724 aa		33	■■■□□ 2.87
CNOT7-204	ENST00000518885	NUP188	Q5SRE5	1749 aa		32.99	■■■□□ 2.87
CNOT7-204	ENST00000518885	KCNQ2	O43526	872 aa		32.97	■■■□□ 2.87
CNOT7-204	ENST00000518885	PCDH11X	Q9BZA7	1347 aa		32.97	■■■□□ 2.87
CNOT7-204	ENST00000518885	PCDH11Y	Q9BZA8	1340 aa		32.97	■■■□□ 2.87
CNOT7-204	ENST00000518885	PTF1A	Q7RTS3	328 aa		32.96	■■■□□ 2.87
CNOT7-204	ENST00000518885	SRCAP	Q6ZRS2	3230 aa		32.94	■■■□□ 2.86
CNOT7-204	ENST00000518885	NCAPD2	Q15021	1401 aa		32.93	■■■□□ 2.86
CNOT7-204	ENST00000518885	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.92	■■■□□ 2.86
CNOT7-204	ENST00000518885	TXNRD1	Q16881	649 aa		32.91	■■■□□ 2.86
CNOT7-204	ENST00000518885	SPG7	Q9UQ90	795 aa		32.91	■■■□□ 2.86
CNOT7-204	ENST00000518885	EIF4A2	Q14240	407 aa	Known RBP	32.9	■■■□□ 2.86
CNOT7-204	ENST00000518885	SYTL4	Q96C24	671 aa	Predicted RBP	32.9	■■■□□ 2.86
CNOT7-204	ENST00000518885	EYA1	Q99502	592 aa		32.9	■■■□□ 2.86
CNOT7-204	ENST00000518885	PLEKHG2	Q9H7P9	1386 aa		32.89	■■■□□ 2.86
CNOT7-204	ENST00000518885	LRP5	O75197	1615 aa		32.88	■■■□□ 2.85
CNOT7-204	ENST00000518885	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.87	■■■□□ 2.85
CNOT7-204	ENST00000518885	SHANK3	Q9BYB0	1731 aa		32.87	■■■□□ 2.85
CNOT7-204	ENST00000518885	BTAF1	O14981	1849 aa		32.86	■■■□□ 2.85
CNOT7-204	ENST00000518885	PER1	O15534	1290 aa	Predicted RBP	32.85	■■■□□ 2.85
CNOT7-204	ENST00000518885	PRIM1	P49642	420 aa	Known RBP	32.85	■■■□□ 2.85
CNOT7-204	ENST00000518885	PROM2	Q8N271	834 aa		32.84	■■■□□ 2.85
CNOT7-204	ENST00000518885	STK32B	Q9NY57	414 aa		32.84	■■■□□ 2.85
CNOT7-204	ENST00000518885	DOT1L	Q8TEK3	1739 aa		32.83	■■■□□ 2.85
CNOT7-204	ENST00000518885	NPC1L1	Q9UHC9	1359 aa		32.83	■■■□□ 2.85
CNOT7-204	ENST00000518885	KAT6B	Q8WYB5	2073 aa		32.82	■■■□□ 2.84
CNOT7-204	ENST00000518885	PKD1L3	Q7Z443	1732 aa		32.82	■■■□□ 2.84
CNOT7-204	ENST00000518885	IGSF1	Q8N6C5	1336 aa		32.81	■■■□□ 2.84
CNOT7-204	ENST00000518885	SLC27A3	Q5K4L6	730 aa		32.81	■■■□□ 2.84
CNOT7-204	ENST00000518885	HMGB2	P26583	209 aa	Known RBP	32.8	■■■□□ 2.84
CNOT7-204	ENST00000518885	CC2D1B	Q5T0F9	858 aa	Known RBP	32.79	■■■□□ 2.84
CNOT7-204	ENST00000518885	CYP27B1	O15528	508 aa		32.77	■■■□□ 2.84
CNOT7-204	ENST00000518885	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.76	■■■□□ 2.83
CNOT7-204	ENST00000518885	SLC15A2	Q16348	729 aa		32.75	■■■□□ 2.83
CNOT7-204	ENST00000518885	IFNL2	Q8IZJ0	200 aa		32.75	■■■□□ 2.83
CNOT7-204	ENST00000518885	MTHFS	P49914	203 aa		32.73	■■■□□ 2.83
CNOT7-204	ENST00000518885	NKX1-1	Q15270	411 aa	Predicted RBP	32.73	■■■□□ 2.83
CNOT7-204	ENST00000518885	AMOT	Q4VCS5	1084 aa		32.72	■■■□□ 2.83
CNOT7-204	ENST00000518885	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.72	■■■□□ 2.83
CNOT7-204	ENST00000518885	SPON1	Q9HCB6	807 aa		32.72	■■■□□ 2.83
CNOT7-204	ENST00000518885	HSP90AB1	P08238	724 aa	Known RBP	32.69	■■■□□ 2.82
CNOT7-204	ENST00000518885	MPRIP	Q6WCQ1	1025 aa		32.69	■■■□□ 2.82
CNOT7-204	ENST00000518885	PHKG2	P15735	406 aa		32.68	■■■□□ 2.82
CNOT7-204	ENST00000518885	IL13	P35225	146 aa		32.68	■■■□□ 2.82
CNOT7-204	ENST00000518885	SMARCC1	Q92922	1105 aa	Predicted RBP	32.68	■■■□□ 2.82
CNOT7-204	ENST00000518885	SULT6B1	Q6IMI4	303 aa		32.66	■■■□□ 2.82
CNOT7-204	ENST00000518885	CCNL1	Q9UK58	526 aa	Predicted RBP	32.66	■■■□□ 2.82
CNOT7-204	ENST00000518885	PAPPA	Q13219	1627 aa		32.66	■■■□□ 2.82
CNOT7-204	ENST00000518885	LRRC4B	Q9NT99	713 aa		32.65	■■■□□ 2.82
CNOT7-204	ENST00000518885	DIAPH1	O60610	1272 aa	Known RBP	32.64	■■■□□ 2.82
CNOT7-204	ENST00000518885	KDR	P35968	1356 aa		32.64	■■■□□ 2.82
CNOT7-204	ENST00000518885	CNGB1	Q14028	1251 aa	Predicted RBP	32.64	■■■□□ 2.82
CNOT7-204	ENST00000518885	TMOD3	Q9NYL9	352 aa		32.64	■■■□□ 2.82
CNOT7-204	ENST00000518885	LY75	O60449	1722 aa		32.63	■■■□□ 2.81
CNOT7-204	ENST00000518885	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.63	■■■□□ 2.81
CNOT7-204	ENST00000518885	C1orf141	Q5JVX7	400 aa		32.62	■■■□□ 2.81
CNOT7-204	ENST00000518885	PALLD	Q8WX93	1383 aa		32.61	■■■□□ 2.81
CNOT7-204	ENST00000518885	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.61	■■■□□ 2.81
CNOT7-204	ENST00000518885	CASZ1	Q86V15	1759 aa		32.6	■■■□□ 2.81
CNOT7-204	ENST00000518885	DCAF5	Q96JK2	942 aa		32.6	■■■□□ 2.81
CNOT7-204	ENST00000518885	AEBP1	Q8IUX7	1158 aa		32.59	■■■□□ 2.81
CNOT7-204	ENST00000518885	CFAP53	Q96M91	514 aa		32.59	■■■□□ 2.81
CNOT7-204	ENST00000518885	TOGARAM1	Q9Y4F4	1720 aa		32.59	■■■□□ 2.81
CNOT7-204	ENST00000518885	PIGB	Q92521	554 aa		32.58	■■■□□ 2.81
CNOT7-204	ENST00000518885	AKT1S1	Q96B36	256 aa		32.58	■■■□□ 2.81
CNOT7-204	ENST00000518885	TFCP2L1	Q9NZI6	479 aa		32.58	■■■□□ 2.81
CNOT7-204	ENST00000518885	ERVV-2	B6SEH9	535 aa		32.57	■■■□□ 2.8
CNOT7-204	ENST00000518885	ITGB4	P16144	1822 aa		32.56	■■■□□ 2.8
CNOT7-204	ENST00000518885	ZNF827	Q17R98	1081 aa		32.56	■■■□□ 2.8
CNOT7-204	ENST00000518885	MTFR1L	Q9H019	292 aa		32.56	■■■□□ 2.8
CNOT7-204	ENST00000518885	ZBTB7A	O95365	584 aa		32.54	■■■□□ 2.8
CNOT7-204	ENST00000518885	SLC16A10	Q8TF71	515 aa		32.52	■■■□□ 2.8
CNOT7-204	ENST00000518885	KCNQ4	P56696	695 aa		32.51	■■■□□ 2.79
CNOT7-204	ENST00000518885	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.51	■■■□□ 2.79
CNOT7-204	ENST00000518885	QSER1	Q2KHR3	1735 aa		32.5	■■■□□ 2.79
CNOT7-204	ENST00000518885	HMOX1	P09601	288 aa		32.49	■■■□□ 2.79
CNOT7-204	ENST00000518885	CABP4	P57796	275 aa		32.49	■■■□□ 2.79
CNOT7-204	ENST00000518885	U2SURP	O15042	1029 aa	Known RBP	32.48	■■■□□ 2.79
CNOT7-204	ENST00000518885	AKAP4	Q5JQC9	854 aa		32.48	■■■□□ 2.79
CNOT7-204	ENST00000518885	NUDC	Q9Y266	331 aa		32.48	■■■□□ 2.79
CNOT7-204	ENST00000518885	C5	P01031	1676 aa		32.47	■■■□□ 2.79
CNOT7-204	ENST00000518885	FLAD1	Q8NFF5	587 aa		32.47	■■■□□ 2.79
CNOT7-204	ENST00000518885	ATF5	Q9Y2D1	282 aa	Predicted RBP	32.47	■■■□□ 2.79
CNOT7-204	ENST00000518885	COL3A1	P02461	1466 aa	Predicted RBP	32.47	■■■□□ 2.79
CNOT7-204	ENST00000518885	LOC102724428	A0A0B4J2F2	783 aa		32.45	■■■□□ 2.79
CNOT7-204	ENST00000518885	SIK1	P57059	783 aa		32.45	■■■□□ 2.79
CNOT7-204	ENST00000518885	PNPLA7	Q6ZV29	1317 aa		32.45	■■■□□ 2.78
CNOT7-204	ENST00000518885	ASAP1	Q9ULH1	1129 aa		32.44	■■■□□ 2.78
CNOT7-204	ENST00000518885	KDM6A	O15550	1401 aa	Predicted RBP	32.43	■■■□□ 2.78
CNOT7-204	ENST00000518885	PPP2R1A	P30153	589 aa		32.43	■■■□□ 2.78
CNOT7-204	ENST00000518885	AK7	Q96M32	723 aa		32.43	■■■□□ 2.78
CNOT7-204	ENST00000518885	MSH5	O43196	834 aa		32.41	■■■□□ 2.78
CNOT7-204	ENST00000518885	ZEB1	P37275	1124 aa	Predicted RBP	32.41	■■■□□ 2.78
CNOT7-204	ENST00000518885	PTGER2	P43116	358 aa		32.41	■■■□□ 2.78
CNOT7-204	ENST00000518885	ATG3	Q9NT62	314 aa		32.41	■■■□□ 2.78
CNOT7-204	ENST00000518885	POLD1	P28340	1107 aa		32.4	■■■□□ 2.78
CNOT7-204	ENST00000518885	DCAF8L1	A6NGE4	600 aa		32.39	■■■□□ 2.78
CNOT7-204	ENST00000518885	ATP6V1A	P38606	617 aa		32.39	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms