RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 RHOQP17081 205 aa9.22□□□□□ -0.93
HDAC2-204ENST00000518756 PRICKLE2Q7Z3G6 844 aa9.22□□□□□ -0.93
HDAC2-204ENST00000518756 GJD4Q96KN9 370 aaPredicted RBP9.22□□□□□ -0.93
HDAC2-204ENST00000518756 ATP5J2-PTCD1G3V325 749 aa9.21□□□□□ -0.94
HDAC2-204ENST00000518756 MEN1O00255 615 aa9.2□□□□□ -0.94
HDAC2-204ENST00000518756 KCTD17Q8N5Z5 321 aa9.2□□□□□ -0.94
HDAC2-204ENST00000518756 MTMR14Q8NCE2 650 aa9.2□□□□□ -0.94
HDAC2-204ENST00000518756 WHAMMQ8TF30 809 aa9.2□□□□□ -0.94
HDAC2-204ENST00000518756 SLURP2P0DP57 97 aa9.19□□□□□ -0.94
HDAC2-204ENST00000518756 SNRKQ9NRH2 765 aa9.19□□□□□ -0.94
HDAC2-204ENST00000518756 GSK3AP49840 483 aa9.18□□□□□ -0.94
HDAC2-204ENST00000518756 RASSF7Q02833 373 aa9.18□□□□□ -0.94
HDAC2-204ENST00000518756 TMEM151AQ8N4L1 468 aa9.18□□□□□ -0.94
HDAC2-204ENST00000518756 CUEDC1Q9NWM3 386 aaPredicted RBP9.18□□□□□ -0.94
HDAC2-204ENST00000518756 NDUFB9Q9Y6M9 179 aa9.18□□□□□ -0.94
HDAC2-204ENST00000518756 GDF11O95390 407 aa9.17□□□□□ -0.94
HDAC2-204ENST00000518756 ADAMTS2O95450 1211 aa9.17□□□□□ -0.94
HDAC2-204ENST00000518756 RNF144AP50876 292 aaPredicted RBP9.17□□□□□ -0.94
HDAC2-204ENST00000518756 TMEM132AQ24JP5 1023 aa9.17□□□□□ -0.94
HDAC2-204ENST00000518756 RNF20Q5VTR2 975 aa9.16□□□□□ -0.94
HDAC2-204ENST00000518756 CC2D2BQ6DHV5 1058 aa9.16□□□□□ -0.94
HDAC2-204ENST00000518756 RIPOR1Q6ZS17 1223 aa9.16□□□□□ -0.94
HDAC2-204ENST00000518756 A0A1W2PRU2 124 aa9.15□□□□□ -0.94
HDAC2-204ENST00000518756 MARSP56192 900 aaKnown RBP9.15□□□□□ -0.94
HDAC2-204ENST00000518756 MAP3K10Q02779 954 aa9.15□□□□□ -0.94
HDAC2-204ENST00000518756 SLC27A3Q5K4L6 730 aa9.15□□□□□ -0.94
HDAC2-204ENST00000518756 NLRP3Q96P20 1036 aa9.15□□□□□ -0.94
HDAC2-204ENST00000518756 PRM3Q9NNZ6 103 aa9.15□□□□□ -0.94
HDAC2-204ENST00000518756 ERVK-9P63128 1117 aa9.14□□□□□ -0.95
HDAC2-204ENST00000518756 NR1H3Q13133 447 aa9.14□□□□□ -0.95
HDAC2-204ENST00000518756 GAS6Q14393 721 aa9.14□□□□□ -0.95
HDAC2-204ENST00000518756 ZNF837Q96EG3 531 aaPredicted RBP9.14□□□□□ -0.95
HDAC2-204ENST00000518756 ESF1Q9H501 851 aaKnown RBP9.14□□□□□ -0.95
HDAC2-204ENST00000518756 PCDHB11Q9Y5F2 797 aa9.14□□□□□ -0.95
HDAC2-204ENST00000518756 GPR25O00155 361 aa9.13□□□□□ -0.95
HDAC2-204ENST00000518756 ARHGEF15O94989 841 aa9.13□□□□□ -0.95
HDAC2-204ENST00000518756 GPC1P35052 558 aa9.13□□□□□ -0.95
HDAC2-204ENST00000518756 IRS1P35568 1242 aa9.13□□□□□ -0.95
HDAC2-204ENST00000518756 SRSF11Q05519 484 aaKnown RBP9.13□□□□□ -0.95
HDAC2-204ENST00000518756 CYP2U1Q7Z449 544 aa9.13□□□□□ -0.95
HDAC2-204ENST00000518756 CCDC125Q86Z20 511 aa9.13□□□□□ -0.95
HDAC2-204ENST00000518756 GAS2L1Q99501 681 aaPredicted RBP9.13□□□□□ -0.95
HDAC2-204ENST00000518756 ZNF330Q9Y3S2 320 aaPredicted RBP9.13□□□□□ -0.95
HDAC2-204ENST00000518756 SCTRP47872 440 aa9.12□□□□□ -0.95
HDAC2-204ENST00000518756 FOXR1Q6PIV2 292 aa9.12□□□□□ -0.95
HDAC2-204ENST00000518756 LYPD4Q6UWN0 246 aa9.12□□□□□ -0.95
HDAC2-204ENST00000518756 TRIM22Q8IYM9 498 aa9.12□□□□□ -0.95
HDAC2-204ENST00000518756 ZNF592Q92610 1267 aa9.12□□□□□ -0.95
HDAC2-204ENST00000518756 ARHGEF10LQ9HCE6 1279 aa9.12□□□□□ -0.95
HDAC2-204ENST00000518756 POU4F2Q12837 409 aa9.11□□□□□ -0.95
HDAC2-204ENST00000518756 GPR37L1O60883 481 aa9.1□□□□□ -0.95
HDAC2-204ENST00000518756 MCCD1P59942 119 aaPredicted RBP9.1□□□□□ -0.95
HDAC2-204ENST00000518756 MCM6Q14566 821 aa9.1□□□□□ -0.95
HDAC2-204ENST00000518756 CLN3Q13286 438 aa9.09□□□□□ -0.95
HDAC2-204ENST00000518756 GTPBP3Q969Y2 492 aaKnown RBP9.09□□□□□ -0.95
HDAC2-204ENST00000518756 SCARF2Q96GP6 870 aaPredicted RBP9.09□□□□□ -0.95
HDAC2-204ENST00000518756 GMCL1Q96IK5 515 aa9.09□□□□□ -0.95
HDAC2-204ENST00000518756 RAB6BQ9NRW1 208 aa9.09□□□□□ -0.95
HDAC2-204ENST00000518756 MBIPQ9NS73 344 aa9.09□□□□□ -0.95
HDAC2-204ENST00000518756 DYRK1BQ9Y463 629 aa9.09□□□□□ -0.95
HDAC2-204ENST00000518756 H7C1W4 665 aa9.08□□□□□ -0.96
HDAC2-204ENST00000518756 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
HDAC2-204ENST00000518756 DBN1Q16643 649 aa9.08□□□□□ -0.96
HDAC2-204ENST00000518756 NBPF10Q6P3W6 841 aaKnown RBP9.08□□□□□ -0.96
HDAC2-204ENST00000518756 NBPF15Q8N660 670 aa9.08□□□□□ -0.96
HDAC2-204ENST00000518756 TRERF1Q96PN7 1200 aa9.08□□□□□ -0.96
HDAC2-204ENST00000518756 TBC1D2BQ9UPU7 963 aa9.08□□□□□ -0.96
HDAC2-204ENST00000518756 GPAT2Q6NUI2 795 aa9.07□□□□□ -0.96
HDAC2-204ENST00000518756 OSBPL3Q9H4L5 887 aa9.07□□□□□ -0.96
HDAC2-204ENST00000518756 ENAMQ9NRM1 1142 aa9.07□□□□□ -0.96
HDAC2-204ENST00000518756 IGF1RP08069 1367 aa9.07□□□□□ -0.96
HDAC2-204ENST00000518756 WASLO00401 505 aaPredicted RBP9.06□□□□□ -0.96
HDAC2-204ENST00000518756 KANK3Q6NY19 840 aa9.06□□□□□ -0.96
HDAC2-204ENST00000518756 GRIP2Q9C0E4 1043 aa9.06□□□□□ -0.96
HDAC2-204ENST00000518756 TIMMDC1Q9NPL8 285 aa9.06□□□□□ -0.96
HDAC2-204ENST00000518756 DNMT3AQ9Y6K1 912 aaPredicted RBP9.06□□□□□ -0.96
HDAC2-204ENST00000518756 TRAK2O60296 914 aa9.05□□□□□ -0.96
HDAC2-204ENST00000518756 FLIIQ13045 1269 aa9.05□□□□□ -0.96
HDAC2-204ENST00000518756 SUZ12Q15022 739 aaKnown RBP9.05□□□□□ -0.96
HDAC2-204ENST00000518756 TAS1R3Q7RTX0 852 aa9.05□□□□□ -0.96
HDAC2-204ENST00000518756 MYCP01106 439 aaPredicted RBP9.04□□□□□ -0.96
HDAC2-204ENST00000518756 NUCKS1Q9H1E3 243 aaKnown RBP9.04□□□□□ -0.96
HDAC2-204ENST00000518756 GDPD2Q9HCC8 539 aa9.04□□□□□ -0.96
HDAC2-204ENST00000518756 SPATA31C2B4DYI2 1134 aa9.03□□□□□ -0.96
HDAC2-204ENST00000518756 NEDD1Q8NHV4 660 aa9.03□□□□□ -0.96
HDAC2-204ENST00000518756 F11P03951 625 aa9.02□□□□□ -0.97
HDAC2-204ENST00000518756 MX2P20592 715 aa9.02□□□□□ -0.97
HDAC2-204ENST00000518756 IRF5Q13568 498 aa9.02□□□□□ -0.97
HDAC2-204ENST00000518756 CNKSR1Q969H4 720 aa9.02□□□□□ -0.97
HDAC2-204ENST00000518756 GPAMQ9HCL2 828 aa9.02□□□□□ -0.97
HDAC2-204ENST00000518756 GNRH1P01148 92 aa9.01□□□□□ -0.97
HDAC2-204ENST00000518756 IL2RAP01589 272 aa9.01□□□□□ -0.97
HDAC2-204ENST00000518756 BCRP11274 1271 aa9.01□□□□□ -0.97
HDAC2-204ENST00000518756 GTF2E1P29083 439 aaPredicted RBP9.01□□□□□ -0.97
HDAC2-204ENST00000518756 ABL2P42684 1182 aa9.01□□□□□ -0.97
HDAC2-204ENST00000518756 PHKA2P46019 1235 aa9.01□□□□□ -0.97
HDAC2-204ENST00000518756 EIF4G2P78344 907 aaKnown RBP eCLIP9.01□□□□□ -0.97
HDAC2-204ENST00000518756 PODNQ7Z5L7 613 aa9.01□□□□□ -0.97
HDAC2-204ENST00000518756 CDCA7Q9BWT1 371 aaPredicted RBP9.01□□□□□ -0.97
HDAC2-204ENST00000518756 NSFL1CQ9UNZ2 370 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms