RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 GDF11O95390 407 aa10.4□□□□□ -0.74
CCDC6-203ENST00000518638 RASSF7Q02833 373 aa10.4□□□□□ -0.74
CCDC6-203ENST00000518638 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.74
CCDC6-203ENST00000518638 ZNF511Q8NB15 262 aa10.4□□□□□ -0.74
CCDC6-203ENST00000518638 BAP1Q92560 729 aa10.4□□□□□ -0.74
CCDC6-203ENST00000518638 ARHGEF12Q9NZN5 1544 aa10.39□□□□□ -0.75
CCDC6-203ENST00000518638 C6orf229H3BNL8 230 aa10.39□□□□□ -0.75
CCDC6-203ENST00000518638 DDRGK1Q96HY6 314 aa10.39□□□□□ -0.75
CCDC6-203ENST00000518638 UHRF1BP1Q6BDS2 1440 aa10.39□□□□□ -0.75
CCDC6-203ENST00000518638 SETD1BQ9UPS6 1966 aaKnown RBP10.38□□□□□ -0.75
CCDC6-203ENST00000518638 FDX1P10109 184 aa10.38□□□□□ -0.75
CCDC6-203ENST00000518638 FAM117AQ9C073 453 aa10.38□□□□□ -0.75
CCDC6-203ENST00000518638 EVA1BQ9NVM1 165 aa10.38□□□□□ -0.75
CCDC6-203ENST00000518638 PTPRTO14522 1441 aa10.38□□□□□ -0.75
CCDC6-203ENST00000518638 SAMD9Q5K651 1589 aa10.38□□□□□ -0.75
CCDC6-203ENST00000518638 PRXQ9BXM0 1461 aa10.37□□□□□ -0.75
CCDC6-203ENST00000518638 STRCQ7RTU9 1775 aa10.37□□□□□ -0.75
CCDC6-203ENST00000518638 ARID3CA6NKF2 412 aa10.37□□□□□ -0.75
CCDC6-203ENST00000518638 PPFIA3O75145 1194 aa10.37□□□□□ -0.75
CCDC6-203ENST00000518638 C9orf84Q5VXU9 1444 aa10.36□□□□□ -0.75
CCDC6-203ENST00000518638 PLEKHD1A6NEE1 506 aa10.36□□□□□ -0.75
CCDC6-203ENST00000518638 KCNH2Q12809 1159 aa10.36□□□□□ -0.75
CCDC6-203ENST00000518638 KLF16Q9BXK1 252 aaPredicted RBP10.36□□□□□ -0.75
CCDC6-203ENST00000518638 SIGLEC1Q9BZZ2 1709 aa10.36□□□□□ -0.75
CCDC6-203ENST00000518638 DIXDC1Q155Q3 683 aa10.35□□□□□ -0.75
CCDC6-203ENST00000518638 FAM174AQ8TBP5 190 aa10.35□□□□□ -0.75
CCDC6-203ENST00000518638 SPIRE2Q8WWL2 714 aa10.35□□□□□ -0.75
CCDC6-203ENST00000518638 HECW1Q76N89 1606 aa10.35□□□□□ -0.75
CCDC6-203ENST00000518638 C6orf118Q5T5N4 469 aa10.34□□□□□ -0.75
CCDC6-203ENST00000518638 PCDHGC3Q9UN70 934 aa10.34□□□□□ -0.75
CCDC6-203ENST00000518638 ATP10AO60312 1499 aa10.34□□□□□ -0.75
CCDC6-203ENST00000518638 NUP153P49790 1475 aaKnown RBP10.34□□□□□ -0.75
CCDC6-203ENST00000518638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.33□□□□□ -0.76
CCDC6-203ENST00000518638 ZIC2O95409 532 aaPredicted RBP10.33□□□□□ -0.76
CCDC6-203ENST00000518638 MLECQ14165 292 aa10.33□□□□□ -0.76
CCDC6-203ENST00000518638 TBC1D2Q9BYX2 928 aa10.33□□□□□ -0.76
CCDC6-203ENST00000518638 ZFAND3Q9H8U3 227 aa10.32□□□□□ -0.76
CCDC6-203ENST00000518638 ADAMTS8Q9UP79 889 aa10.32□□□□□ -0.76
CCDC6-203ENST00000518638 UPP2O95045 317 aa10.31□□□□□ -0.76
CCDC6-203ENST00000518638 LTBP4Q8N2S1 1624 aa10.31□□□□□ -0.76
CCDC6-203ENST00000518638 BMP2P12643 396 aa10.3□□□□□ -0.76
CCDC6-203ENST00000518638 ITPKCQ96DU7 683 aa10.3□□□□□ -0.76
CCDC6-203ENST00000518638 CDK15Q96Q40 435 aa10.3□□□□□ -0.76
CCDC6-203ENST00000518638 RSPH6AQ9H0K4 717 aa10.3□□□□□ -0.76
CCDC6-203ENST00000518638 SCAPERQ9BY12 1400 aa10.3□□□□□ -0.76
CCDC6-203ENST00000518638 ZNF518AQ6AHZ1 1483 aa10.3□□□□□ -0.76
CCDC6-203ENST00000518638 MYSM1Q5VVJ2 828 aa10.29□□□□□ -0.76
CCDC6-203ENST00000518638 IL27Q8NEV9 243 aa10.29□□□□□ -0.76
CCDC6-203ENST00000518638 PRR7Q8TB68 274 aa10.29□□□□□ -0.76
CCDC6-203ENST00000518638 REREQ9P2R6 1566 aa10.29□□□□□ -0.76
CCDC6-203ENST00000518638 PLCH2O75038 1416 aa10.28□□□□□ -0.76
CCDC6-203ENST00000518638 MOXD2PA6NHM9 499 aa10.28□□□□□ -0.76
CCDC6-203ENST00000518638 KRT76Q01546 638 aa10.28□□□□□ -0.76
CCDC6-203ENST00000518638 NR5A1Q13285 461 aa10.28□□□□□ -0.76
CCDC6-203ENST00000518638 ARID5BQ14865 1188 aa10.28□□□□□ -0.76
CCDC6-203ENST00000518638 CNTNAP3BQ96NU0 1288 aa10.28□□□□□ -0.76
CCDC6-203ENST00000518638 CNTNAP3Q9BZ76 1288 aa10.28□□□□□ -0.76
CCDC6-203ENST00000518638 MYO5CQ9NQX4 1742 aa10.27□□□□□ -0.76
CCDC6-203ENST00000518638 GJA5P36382 358 aa10.27□□□□□ -0.77
CCDC6-203ENST00000518638 SH3D19Q5HYK7 790 aa10.27□□□□□ -0.77
CCDC6-203ENST00000518638 DESI1Q6ICB0 168 aa10.27□□□□□ -0.77
CCDC6-203ENST00000518638 LINC00528Q8N1L1 170 aa10.27□□□□□ -0.77
CCDC6-203ENST00000518638 ESF1Q9H501 851 aaKnown RBP10.27□□□□□ -0.77
CCDC6-203ENST00000518638 DNMT3AQ9Y6K1 912 aaPredicted RBP10.27□□□□□ -0.77
CCDC6-203ENST00000518638 C3P01024 1663 aa10.27□□□□□ -0.77
CCDC6-203ENST00000518638 NCOA1Q15788 1441 aa10.26□□□□□ -0.77
CCDC6-203ENST00000518638 RSBN1LQ6PCB5 846 aaPredicted RBP10.26□□□□□ -0.77
CCDC6-203ENST00000518638 MEIOBQ8N635 442 aa10.26□□□□□ -0.77
CCDC6-203ENST00000518638 DNMT3LQ9UJW3 386 aa10.26□□□□□ -0.77
CCDC6-203ENST00000518638 KDM5CP41229 1560 aa10.26□□□□□ -0.77
CCDC6-203ENST00000518638 CNTLNQ9NXG0 1405 aa10.25□□□□□ -0.77
CCDC6-203ENST00000518638 TRAPPC8Q9Y2L5 1435 aa10.25□□□□□ -0.77
CCDC6-203ENST00000518638 AGLP35573 1532 aa10.25□□□□□ -0.77
CCDC6-203ENST00000518638 SPDYE5A6NIY4 337 aa10.25□□□□□ -0.77
CCDC6-203ENST00000518638 SPTLC1O15269 473 aa10.25□□□□□ -0.77
CCDC6-203ENST00000518638 IGHA1P01876 353 aa10.25□□□□□ -0.77
CCDC6-203ENST00000518638 NDUFV2P19404 249 aa10.25□□□□□ -0.77
CCDC6-203ENST00000518638 CEBPAP49715 358 aaPredicted RBP10.25□□□□□ -0.77
CCDC6-203ENST00000518638 GPAT2Q6NUI2 795 aa10.25□□□□□ -0.77
CCDC6-203ENST00000518638 GOPCQ9HD26 462 aa10.25□□□□□ -0.77
CCDC6-203ENST00000518638 SOS2Q07890 1332 aaPredicted RBP10.25□□□□□ -0.77
CCDC6-203ENST00000518638 NR3C2P08235 984 aa10.24□□□□□ -0.77
CCDC6-203ENST00000518638 CTHP32929 405 aa10.24□□□□□ -0.77
CCDC6-203ENST00000518638 SKIV2LQ15477 1246 aaKnown RBP10.24□□□□□ -0.77
CCDC6-203ENST00000518638 EFCAB2Q5VUJ9 269 aa10.24□□□□□ -0.77
CCDC6-203ENST00000518638 RIC3Q7Z5B4 369 aa10.24□□□□□ -0.77
CCDC6-203ENST00000518638 GPR161Q8N6U8 529 aaKnown RBP10.24□□□□□ -0.77
CCDC6-203ENST00000518638 CLK2P49760 499 aaKnown RBP10.23□□□□□ -0.77
CCDC6-203ENST00000518638 MTMR2Q13614 643 aa10.23□□□□□ -0.77
CCDC6-203ENST00000518638 TUSC1Q2TAM9 212 aa10.23□□□□□ -0.77
CCDC6-203ENST00000518638 SVOPQ8N4V2 548 aa10.23□□□□□ -0.77
CCDC6-203ENST00000518638 FOXJ1Q92949 421 aa10.23□□□□□ -0.77
CCDC6-203ENST00000518638 DIP2CQ9Y2E4 1556 aa10.22□□□□□ -0.77
CCDC6-203ENST00000518638 LIMD1Q9UGP4 676 aa10.22□□□□□ -0.77
CCDC6-203ENST00000518638 NPATQ14207 1427 aa10.22□□□□□ -0.77
CCDC6-203ENST00000518638 MROH2AA6NES4 1674 aa10.22□□□□□ -0.77
CCDC6-203ENST00000518638 UBAP1LF5GYI3 381 aa10.21□□□□□ -0.77
CCDC6-203ENST00000518638 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.21□□□□□ -0.773e-11■■□□□ 12.7
CCDC6-203ENST00000518638 ZNF385CQ66K41 422 aaPredicted RBP10.21□□□□□ -0.77
CCDC6-203ENST00000518638 COL25A1Q9BXS0 654 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms