RNA–Protein interactions for RNA: ENST00000518271.1

MRPS28-202, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-202ENST00000518271 KCNQ2O43526 872 aa16.9■□□□□ 0.3
MRPS28-202ENST00000518271 USHBP1Q8N6Y0 703 aa16.9■□□□□ 0.3
MRPS28-202ENST00000518271 PLSCR1O15162 318 aa16.89■□□□□ 0.29
MRPS28-202ENST00000518271 R3HDM1Q15032 1099 aaKnown RBP16.89■□□□□ 0.29
MRPS28-202ENST00000518271 LY75O60449 1722 aa16.89■□□□□ 0.29
MRPS28-202ENST00000518271 NSD2O96028 1365 aa16.89■□□□□ 0.29
MRPS28-202ENST00000518271 PROM2Q8N271 834 aa16.88■□□□□ 0.29
MRPS28-202ENST00000518271 POLKQ9UBT6 870 aa16.87■□□□□ 0.29
MRPS28-202ENST00000518271 WASHC2AQ641Q2 1341 aa16.87■□□□□ 0.29
MRPS28-202ENST00000518271 ITGB4P16144 1822 aa16.86■□□□□ 0.29
MRPS28-202ENST00000518271 ACSBG1Q96GR2 724 aa16.86■□□□□ 0.29
MRPS28-202ENST00000518271 ANO8Q9HCE9 1232 aaPredicted RBP16.86■□□□□ 0.29
MRPS28-202ENST00000518271 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
MRPS28-202ENST00000518271 AMER1Q5JTC6 1135 aaPredicted RBP16.83■□□□□ 0.28
MRPS28-202ENST00000518271 ZCRB1Q8TBF4 217 aaKnown RBP16.83■□□□□ 0.28
MRPS28-202ENST00000518271 QSER1Q2KHR3 1735 aa16.82■□□□□ 0.28
MRPS28-202ENST00000518271 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
MRPS28-202ENST00000518271 DDX54Q8TDD1 881 aaKnown RBP16.82■□□□□ 0.28
MRPS28-202ENST00000518271 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
MRPS28-202ENST00000518271 TXNRD1Q16881 649 aa16.81■□□□□ 0.28
MRPS28-202ENST00000518271 PER1O15534 1290 aaPredicted RBP16.8■□□□□ 0.28
MRPS28-202ENST00000518271 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
MRPS28-202ENST00000518271 EYA1Q99502 592 aa16.8■□□□□ 0.28
MRPS28-202ENST00000518271 RAPGEF4Q8WZA2 1011 aa16.79■□□□□ 0.28
MRPS28-202ENST00000518271 TAF1LQ8IZX4 1826 aa16.79■□□□□ 0.28
MRPS28-202ENST00000518271 CYP27B1O15528 508 aa16.78■□□□□ 0.28
MRPS28-202ENST00000518271 TATP17735 454 aaPredicted RBP16.78■□□□□ 0.28
MRPS28-202ENST00000518271 IGSF1Q8N6C5 1336 aa16.77■□□□□ 0.28
MRPS28-202ENST00000518271 NBPF14Q5TI25 921 aa16.77■□□□□ 0.28
MRPS28-202ENST00000518271 KNSTRNQ9Y448 316 aa16.77■□□□□ 0.28
MRPS28-202ENST00000518271 PCDH11XQ9BZA7 1347 aa16.76■□□□□ 0.27
MRPS28-202ENST00000518271 PCDH11YQ9BZA8 1340 aa16.76■□□□□ 0.27
MRPS28-202ENST00000518271 PRIM1P49642 420 aaKnown RBP16.76■□□□□ 0.27
MRPS28-202ENST00000518271 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
MRPS28-202ENST00000518271 PDGFDQ9GZP0 370 aaPredicted RBP16.76■□□□□ 0.27
MRPS28-202ENST00000518271 LRRC4BQ9NT99 713 aa16.76■□□□□ 0.27
MRPS28-202ENST00000518271 C5P01031 1676 aa16.75■□□□□ 0.27
MRPS28-202ENST00000518271 VIRMAQ69YN4 1812 aaKnown RBP16.75■□□□□ 0.27
MRPS28-202ENST00000518271 COL24A1Q17RW2 1714 aa16.75■□□□□ 0.27
MRPS28-202ENST00000518271 PLEKHG2Q9H7P9 1386 aa16.75■□□□□ 0.27
MRPS28-202ENST00000518271 NPC1L1Q9UHC9 1359 aa16.74■□□□□ 0.27
MRPS28-202ENST00000518271 COL3A1P02461 1466 aaPredicted RBP16.73■□□□□ 0.27
MRPS28-202ENST00000518271 ZNF827Q17R98 1081 aa16.73■□□□□ 0.27
MRPS28-202ENST00000518271 SYTL4Q96C24 671 aaPredicted RBP16.72■□□□□ 0.27
MRPS28-202ENST00000518271 NKX1-1Q15270 411 aaPredicted RBP16.71■□□□□ 0.27
MRPS28-202ENST00000518271 SLC15A2Q16348 729 aa16.71■□□□□ 0.27
MRPS28-202ENST00000518271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.71■□□□□ 0.27
MRPS28-202ENST00000518271 KDRP35968 1356 aa16.71■□□□□ 0.27
MRPS28-202ENST00000518271 SCN11AQ9UI33 1791 aa16.7■□□□□ 0.26
MRPS28-202ENST00000518271 AEBP1Q8IUX7 1158 aa16.7■□□□□ 0.26
MRPS28-202ENST00000518271 IL13P35225 146 aa16.69■□□□□ 0.26
MRPS28-202ENST00000518271 KCNQ4P56696 695 aa16.69■□□□□ 0.26
MRPS28-202ENST00000518271 STK32BQ9NY57 414 aa16.69■□□□□ 0.26
MRPS28-202ENST00000518271 UBR3Q6ZT12 1888 aa16.68■□□□□ 0.26
MRPS28-202ENST00000518271 CC2D1BQ5T0F9 858 aaKnown RBP16.68■□□□□ 0.26
MRPS28-202ENST00000518271 AKT1S1Q96B36 256 aa16.68■□□□□ 0.26
MRPS28-202ENST00000518271 SPG7Q9UQ90 795 aa16.68■□□□□ 0.26
MRPS28-202ENST00000518271 PHKG2P15735 406 aa16.67■□□□□ 0.26
MRPS28-202ENST00000518271 SLC27A3Q5K4L6 730 aa16.67■□□□□ 0.26
MRPS28-202ENST00000518271 KDM6AO15550 1401 aaPredicted RBP16.67■□□□□ 0.26
MRPS28-202ENST00000518271 C4BP0C0L5 1744 aa16.67■□□□□ 0.26
MRPS28-202ENST00000518271 MTHFSP49914 203 aa16.66■□□□□ 0.26
MRPS28-202ENST00000518271 ZNF831Q5JPB2 1677 aa16.65■□□□□ 0.26
MRPS28-202ENST00000518271 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
MRPS28-202ENST00000518271 PALLDQ8WX93 1383 aa16.65■□□□□ 0.26
MRPS28-202ENST00000518271 PTGER2P43116 358 aa16.65■□□□□ 0.26
MRPS28-202ENST00000518271 SPON1Q9HCB6 807 aa16.65■□□□□ 0.26
MRPS28-202ENST00000518271 COL5A3P25940 1745 aaPredicted RBP16.65■□□□□ 0.26
MRPS28-202ENST00000518271 ZBTB7AO95365 584 aa16.64■□□□□ 0.25
MRPS28-202ENST00000518271 MPRIPQ6WCQ1 1025 aa16.64■□□□□ 0.25
MRPS28-202ENST00000518271 IFNL2Q8IZJ0 200 aa16.64■□□□□ 0.25
MRPS28-202ENST00000518271 PIGBQ92521 554 aa16.64■□□□□ 0.25
MRPS28-202ENST00000518271 SGIP1Q9BQI5 828 aa16.64■□□□□ 0.25
MRPS28-202ENST00000518271 CCNL1Q9UK58 526 aaPredicted RBP16.63■□□□□ 0.25
MRPS28-202ENST00000518271 PNPLA7Q6ZV29 1317 aa16.63■□□□□ 0.25
MRPS28-202ENST00000518271 SULT6B1Q6IMI4 303 aa16.62■□□□□ 0.25
MRPS28-202ENST00000518271 CICQ96RK0 1608 aaPredicted RBP16.61■□□□□ 0.25
MRPS28-202ENST00000518271 ZNF530Q6P9A1 599 aaPredicted RBP16.6■□□□□ 0.25
MRPS28-202ENST00000518271 ATF5Q9Y2D1 282 aaPredicted RBP16.6■□□□□ 0.25
MRPS28-202ENST00000518271 MRC1P22897 1456 aa16.6■□□□□ 0.25
MRPS28-202ENST00000518271 TJP1Q07157 1748 aa16.59■□□□□ 0.25
MRPS28-202ENST00000518271 MYH14Q7Z406 1995 aaKnown RBP16.59■□□□□ 0.25
MRPS28-202ENST00000518271 PLEKHO1Q53GL0 409 aaPredicted RBP16.59■□□□□ 0.25
MRPS28-202ENST00000518271 MTFR1LQ9H019 292 aa16.59■□□□□ 0.25
MRPS28-202ENST00000518271 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.24
MRPS28-202ENST00000518271 AMOTQ4VCS5 1084 aa16.58■□□□□ 0.24
MRPS28-202ENST00000518271 ASAP1Q9ULH1 1129 aa16.58■□□□□ 0.24
MRPS28-202ENST00000518271 SIPA1L3O60292 1781 aaPredicted RBP16.58■□□□□ 0.24
MRPS28-202ENST00000518271 AMIGO3Q86WK7 504 aa16.57■□□□□ 0.24
MRPS28-202ENST00000518271 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
MRPS28-202ENST00000518271 TMOD3Q9NYL9 352 aa16.57■□□□□ 0.24
MRPS28-202ENST00000518271 GOLGB1Q14789 3259 aaKnown RBP16.56■□□□□ 0.24
MRPS28-202ENST00000518271 DIAPH1O60610 1272 aaKnown RBP16.56■□□□□ 0.24
MRPS28-202ENST00000518271 HMOX1P09601 288 aa16.56■□□□□ 0.24
MRPS28-202ENST00000518271 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
MRPS28-202ENST00000518271 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
MRPS28-202ENST00000518271 UBR2Q8IWV8 1755 aa16.56■□□□□ 0.24
MRPS28-202ENST00000518271 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
MRPS28-202ENST00000518271 ITPK1Q13572 414 aa16.55■□□□□ 0.24
MRPS28-202ENST00000518271 SLC4A9Q96Q91 983 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms