RNA–Protein interactions for RNA: ENST00000518146.5

NSMCE2-205, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-205ENST00000518146 ERBB3P21860 1342 aa12.98□□□□□ -0.33
NSMCE2-205ENST00000518146 CEP350Q5VT06 3117 aa12.98□□□□□ -0.33
NSMCE2-205ENST00000518146 GPR162Q16538 588 aa12.97□□□□□ -0.33
NSMCE2-205ENST00000518146 ZNF827Q17R98 1081 aa12.97□□□□□ -0.33
NSMCE2-205ENST00000518146 CLEC11AQ9Y240 323 aa12.97□□□□□ -0.33
NSMCE2-205ENST00000518146 MON2Q7Z3U7 1717 aa12.96□□□□□ -0.33
NSMCE2-205ENST00000518146 USP54Q70EL1 1684 aa12.96□□□□□ -0.33
NSMCE2-205ENST00000518146 IL2RBP14784 551 aa12.96□□□□□ -0.33
NSMCE2-205ENST00000518146 NLRP2Q9NX02 1062 aa12.96□□□□□ -0.33
NSMCE2-205ENST00000518146 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
NSMCE2-205ENST00000518146 LRRC4BQ9NT99 713 aa12.95□□□□□ -0.34
NSMCE2-205ENST00000518146 QSER1Q2KHR3 1735 aa12.95□□□□□ -0.34
NSMCE2-205ENST00000518146 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
NSMCE2-205ENST00000518146 LTN1O94822 1766 aa12.94□□□□□ -0.34
NSMCE2-205ENST00000518146 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
NSMCE2-205ENST00000518146 POLD1P28340 1107 aa12.94□□□□□ -0.34
NSMCE2-205ENST00000518146 KLHL34Q8N239 644 aa12.94□□□□□ -0.34
NSMCE2-205ENST00000518146 SLC16A10Q8TF71 515 aa12.94□□□□□ -0.34
NSMCE2-205ENST00000518146 COL24A1Q17RW2 1714 aa12.93□□□□□ -0.34
NSMCE2-205ENST00000518146 ROCK2O75116 1388 aaKnown RBP12.93□□□□□ -0.34
NSMCE2-205ENST00000518146 SLC27A3Q5K4L6 730 aa12.92□□□□□ -0.34
NSMCE2-205ENST00000518146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.92□□□□□ -0.34
NSMCE2-205ENST00000518146 ANKRD24Q8TF21 1146 aa12.92□□□□□ -0.34
NSMCE2-205ENST00000518146 L3MBTL2Q969R5 705 aa12.92□□□□□ -0.34
NSMCE2-205ENST00000518146 PNPLA7Q6ZV29 1317 aa12.91□□□□□ -0.34
NSMCE2-205ENST00000518146 PELP1Q8IZL8 1130 aaKnown RBP12.91□□□□□ -0.34
NSMCE2-205ENST00000518146 KAT6BQ8WYB5 2073 aa12.91□□□□□ -0.34
NSMCE2-205ENST00000518146 SHANK3Q9BYB0 1731 aa12.91□□□□□ -0.34
NSMCE2-205ENST00000518146 NME9Q86XW9 330 aa12.9□□□□□ -0.34
NSMCE2-205ENST00000518146 SBNO2Q9Y2G9 1366 aa12.9□□□□□ -0.34
NSMCE2-205ENST00000518146 CD163L1Q9NR16 1453 aa12.9□□□□□ -0.34
NSMCE2-205ENST00000518146 TUBGCP6Q96RT7 1819 aa12.9□□□□□ -0.34
NSMCE2-205ENST00000518146 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
NSMCE2-205ENST00000518146 IFFO2Q5TF58 517 aa12.89□□□□□ -0.35
NSMCE2-205ENST00000518146 NLGN2Q8NFZ4 835 aa12.89□□□□□ -0.35
NSMCE2-205ENST00000518146 TFCP2L1Q9NZI6 479 aa12.89□□□□□ -0.35
NSMCE2-205ENST00000518146 DDX54Q8TDD1 881 aaKnown RBP12.88□□□□□ -0.35
NSMCE2-205ENST00000518146 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
NSMCE2-205ENST00000518146 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
NSMCE2-205ENST00000518146 HDGFL2Q7Z4V5 671 aaPredicted RBP12.87□□□□□ -0.35
NSMCE2-205ENST00000518146 LY75O60449 1722 aa12.87□□□□□ -0.35
NSMCE2-205ENST00000518146 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
NSMCE2-205ENST00000518146 GRIN3BO60391 1043 aa12.86□□□□□ -0.35
NSMCE2-205ENST00000518146 TMC1Q8TDI8 760 aa12.86□□□□□ -0.35
NSMCE2-205ENST00000518146 SYTL4Q96C24 671 aaPredicted RBP12.86□□□□□ -0.35
NSMCE2-205ENST00000518146 NSD2O96028 1365 aa12.85□□□□□ -0.35
NSMCE2-205ENST00000518146 KCNQ4P56696 695 aa12.85□□□□□ -0.35
NSMCE2-205ENST00000518146 IP6K1Q92551 441 aa12.85□□□□□ -0.35
NSMCE2-205ENST00000518146 C19orf67A6NJJ6 358 aa12.84□□□□□ -0.35
NSMCE2-205ENST00000518146 YBX3P16989 372 aaKnown RBP eCLIP12.84□□□□□ -0.35
NSMCE2-205ENST00000518146 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
NSMCE2-205ENST00000518146 LTV1Q96GA3 475 aaPredicted RBP12.84□□□□□ -0.35
NSMCE2-205ENST00000518146 A0A1W2PP64 1363 aa12.83□□□□□ -0.36
NSMCE2-205ENST00000518146 TERF2IPQ9NYB0 399 aa12.83□□□□□ -0.36
NSMCE2-205ENST00000518146 CCNL1Q9UK58 526 aaPredicted RBP12.83□□□□□ -0.36
NSMCE2-205ENST00000518146 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
NSMCE2-205ENST00000518146 SIN3AQ96ST3 1273 aa12.82□□□□□ -0.36
NSMCE2-205ENST00000518146 SLC12A5Q9H2X9 1139 aa12.82□□□□□ -0.36
NSMCE2-205ENST00000518146 COL23A1Q86Y22 540 aaPredicted RBP12.81□□□□□ -0.36
NSMCE2-205ENST00000518146 ZCRB1Q8TBF4 217 aaKnown RBP12.81□□□□□ -0.36
NSMCE2-205ENST00000518146 MEGF6O75095 1541 aa12.81□□□□□ -0.36
NSMCE2-205ENST00000518146 USP47Q96K76 1375 aa12.81□□□□□ -0.36
NSMCE2-205ENST00000518146 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
NSMCE2-205ENST00000518146 CARD11Q9BXL7 1154 aa12.8□□□□□ -0.36
NSMCE2-205ENST00000518146 C5P01031 1676 aa12.8□□□□□ -0.36
NSMCE2-205ENST00000518146 HOXC9P31274 260 aa12.79□□□□□ -0.36
NSMCE2-205ENST00000518146 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
NSMCE2-205ENST00000518146 GPBP1L1Q9HC44 474 aaPredicted RBP12.79□□□□□ -0.36
NSMCE2-205ENST00000518146 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
NSMCE2-205ENST00000518146 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
NSMCE2-205ENST00000518146 AMPHP49418 695 aa12.78□□□□□ -0.36
NSMCE2-205ENST00000518146 COG3Q96JB2 828 aa12.78□□□□□ -0.36
NSMCE2-205ENST00000518146 CD2APQ9Y5K6 639 aa12.78□□□□□ -0.36
NSMCE2-205ENST00000518146 ADCY9O60503 1353 aa12.78□□□□□ -0.36
NSMCE2-205ENST00000518146 PUS7Q96PZ0 661 aaKnown RBP12.77□□□□□ -0.37
NSMCE2-205ENST00000518146 CGNL1Q0VF96 1302 aa12.77□□□□□ -0.37
NSMCE2-205ENST00000518146 RTL1A6NKG5 1358 aa12.77□□□□□ -0.37
NSMCE2-205ENST00000518146 PRR29P0C7W0 189 aa12.76□□□□□ -0.37
NSMCE2-205ENST00000518146 HSPA6P17066 643 aa12.76□□□□□ -0.37
NSMCE2-205ENST00000518146 HMGB2P26583 209 aaKnown RBP12.76□□□□□ -0.37
NSMCE2-205ENST00000518146 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
NSMCE2-205ENST00000518146 FLAD1Q8NFF5 587 aa12.76□□□□□ -0.37
NSMCE2-205ENST00000518146 SMG6Q86US8 1419 aaKnown RBP12.75□□□□□ -0.37
NSMCE2-205ENST00000518146 TAF1LQ8IZX4 1826 aa12.74□□□□□ -0.37
NSMCE2-205ENST00000518146 PALLDQ8WX93 1383 aa12.74□□□□□ -0.37
NSMCE2-205ENST00000518146 FBLN1P23142 703 aa12.74□□□□□ -0.37
NSMCE2-205ENST00000518146 NBPF6Q5VWK0 638 aa12.74□□□□□ -0.37
NSMCE2-205ENST00000518146 ZNF526Q8TF50 670 aaPredicted RBP12.74□□□□□ -0.37
NSMCE2-205ENST00000518146 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
NSMCE2-205ENST00000518146 NBPF4Q96M43 638 aa12.74□□□□□ -0.37
NSMCE2-205ENST00000518146 PCDH11XQ9BZA7 1347 aa12.73□□□□□ -0.37
NSMCE2-205ENST00000518146 PCDH11YQ9BZA8 1340 aa12.73□□□□□ -0.37
NSMCE2-205ENST00000518146 USHBP1Q8N6Y0 703 aa12.73□□□□□ -0.37
NSMCE2-205ENST00000518146 C4BP0C0L5 1744 aa12.73□□□□□ -0.37
NSMCE2-205ENST00000518146 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
NSMCE2-205ENST00000518146 NSD3Q9BZ95 1437 aa12.71□□□□□ -0.37
NSMCE2-205ENST00000518146 TOGARAM1Q9Y4F4 1720 aa12.71□□□□□ -0.37
NSMCE2-205ENST00000518146 IGSF1Q8N6C5 1336 aa12.71□□□□□ -0.37
NSMCE2-205ENST00000518146 RRS1Q15050 365 aaKnown RBP12.71□□□□□ -0.37
NSMCE2-205ENST00000518146 AK7Q96M32 723 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms