RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 HTATSF1O43719 755 aaKnown RBP33.8■■■■□ 3
COL13A1-210ENST00000517713 RGS3P49796 1198 aa33.8■■■■□ 3
COL13A1-210ENST00000517713 KIAA0232Q92628 1395 aa33.79■■■■□ 3
COL13A1-210ENST00000517713 GCP02774 474 aa33.79■■■■□ 3
COL13A1-210ENST00000517713 DCCP43146 1447 aa33.79■■■■□ 3
COL13A1-210ENST00000517713 HAP1P54257 671 aaPredicted RBP33.79■■■■□ 3
COL13A1-210ENST00000517713 LMOD2Q6P5Q4 547 aa33.78■■■■□ 3
COL13A1-210ENST00000517713 MST1RQ04912 1400 aa33.78■■■■□ 3
COL13A1-210ENST00000517713 ZBTB7CA1YPR0 619 aa33.77■■■■□ 3
COL13A1-210ENST00000517713 MSH5O43196 834 aa33.75■■■□□ 2.99
COL13A1-210ENST00000517713 USP19O94966 1318 aa33.75■■■□□ 2.99
COL13A1-210ENST00000517713 GNAT3A8MTJ3 354 aa33.75■■■□□ 2.99
COL13A1-210ENST00000517713 USHBP1Q8N6Y0 703 aa33.75■■■□□ 2.99
COL13A1-210ENST00000517713 ARHGEF25Q86VW2 580 aa33.74■■■□□ 2.99
COL13A1-210ENST00000517713 ZBTB40Q9NUA8 1239 aa33.74■■■□□ 2.99
COL13A1-210ENST00000517713 KRT24Q2M2I5 525 aa33.73■■■□□ 2.99
COL13A1-210ENST00000517713 ANP32AP39687 249 aaKnown RBP33.72■■■□□ 2.99
COL13A1-210ENST00000517713 NBPF6Q5VWK0 638 aa33.72■■■□□ 2.99
COL13A1-210ENST00000517713 NBPF4Q96M43 638 aa33.72■■■□□ 2.99
COL13A1-210ENST00000517713 TSPYL4Q9UJ04 414 aa33.72■■■□□ 2.99
COL13A1-210ENST00000517713 MIS18AQ9NYP9 233 aa33.71■■■□□ 2.99
COL13A1-210ENST00000517713 MAP3K5Q99683 1374 aa33.71■■■□□ 2.99
COL13A1-210ENST00000517713 PLEKHG5O94827 1062 aa33.7■■■□□ 2.99
COL13A1-210ENST00000517713 LRRC37A3O60309 1634 aa33.7■■■□□ 2.99
COL13A1-210ENST00000517713 ABCC4O15439 1325 aa33.7■■■□□ 2.99
COL13A1-210ENST00000517713 API5Q9BZZ5 524 aaKnown RBP33.7■■■□□ 2.99
COL13A1-210ENST00000517713 MSH6P52701 1360 aa33.69■■■□□ 2.98
COL13A1-210ENST00000517713 HDAC1Q13547 482 aaPredicted RBP33.69■■■□□ 2.98
COL13A1-210ENST00000517713 FAM161AQ3B820 660 aa33.69■■■□□ 2.98
COL13A1-210ENST00000517713 CADPS2Q86UW7 1296 aa33.69■■■□□ 2.98
COL13A1-210ENST00000517713 KDM4FA0A1W2PPD8 638 aa33.68■■■□□ 2.98
COL13A1-210ENST00000517713 CHMP4BQ9H444 224 aaKnown RBP33.68■■■□□ 2.98
COL13A1-210ENST00000517713 ALS2Q96Q42 1657 aa33.68■■■□□ 2.98
COL13A1-210ENST00000517713 PDZRN3Q9UPQ7 1066 aa33.65■■■□□ 2.98
COL13A1-210ENST00000517713 RGPD2P0DJD1 1756 aa33.65■■■□□ 2.98
COL13A1-210ENST00000517713 LMTK3Q96Q04 1460 aa33.65■■■□□ 2.98
COL13A1-210ENST00000517713 ZBTB7BO15156 539 aaPredicted RBP33.64■■■□□ 2.98
COL13A1-210ENST00000517713 C8orf34Q49A92 452 aa33.63■■■□□ 2.97
COL13A1-210ENST00000517713 IL17REQ8NFR9 667 aa33.63■■■□□ 2.97
COL13A1-210ENST00000517713 LRRC59Q96AG4 307 aaKnown RBP33.63■■■□□ 2.97
COL13A1-210ENST00000517713 STRCQ7RTU9 1775 aa33.6■■■□□ 2.97
COL13A1-210ENST00000517713 ANKRD24Q8TF21 1146 aa33.6■■■□□ 2.97
COL13A1-210ENST00000517713 DDX17Q92841 729 aaKnown RBP33.6■■■□□ 2.97
COL13A1-210ENST00000517713 NPM2Q86SE8 214 aaKnown RBP33.6■■■□□ 2.97
COL13A1-210ENST00000517713 BABAM1Q9NWV8 329 aa33.59■■■□□ 2.97
COL13A1-210ENST00000517713 NPHP3Q7Z494 1330 aa33.59■■■□□ 2.97
COL13A1-210ENST00000517713 MED1Q15648 1581 aaPredicted RBP33.59■■■□□ 2.97
COL13A1-210ENST00000517713 IPO9Q96P70 1041 aaKnown RBP33.58■■■□□ 2.97
COL13A1-210ENST00000517713 NCAPD2Q15021 1401 aa33.58■■■□□ 2.97
COL13A1-210ENST00000517713 TAF7Q15545 349 aaPredicted RBP33.57■■■□□ 2.96
COL13A1-210ENST00000517713 XIRP1Q702N8 1843 aaKnown RBP33.57■■■□□ 2.96
COL13A1-210ENST00000517713 AXIN2Q9Y2T1 843 aa33.57■■■□□ 2.96
COL13A1-210ENST00000517713 PTPRCP08575 1304 aa33.56■■■□□ 2.96
COL13A1-210ENST00000517713 SMC5Q8IY18 1101 aa33.54■■■□□ 2.96
COL13A1-210ENST00000517713 SLC4A2P04920 1241 aa33.53■■■□□ 2.96
COL13A1-210ENST00000517713 ZC3H6P61129 1189 aaKnown RBP33.53■■■□□ 2.96
COL13A1-210ENST00000517713 PLEKHO1Q53GL0 409 aaPredicted RBP33.53■■■□□ 2.96
COL13A1-210ENST00000517713 RGS12O14924 1447 aa33.53■■■□□ 2.96
COL13A1-210ENST00000517713 INTS3Q68E01 1043 aaKnown RBP33.53■■■□□ 2.96
COL13A1-210ENST00000517713 CAMTA1Q9Y6Y1 1673 aa33.53■■■□□ 2.96
COL13A1-210ENST00000517713 CEMIPQ8WUJ3 1361 aa33.52■■■□□ 2.96
COL13A1-210ENST00000517713 AMOTQ4VCS5 1084 aa33.52■■■□□ 2.96
COL13A1-210ENST00000517713 TNS3Q68CZ2 1445 aa33.51■■■□□ 2.95
COL13A1-210ENST00000517713 RGPD5Q99666 1765 aa33.5■■■□□ 2.95
COL13A1-210ENST00000517713 AKAP4Q5JQC9 854 aa33.5■■■□□ 2.95
COL13A1-210ENST00000517713 LMO7Q8WWI1 1683 aa33.5■■■□□ 2.95
COL13A1-210ENST00000517713 PXDNQ92626 1479 aa33.49■■■□□ 2.95
COL13A1-210ENST00000517713 SOS1Q07889 1333 aaPredicted RBP33.49■■■□□ 2.95
COL13A1-210ENST00000517713 ZNF530Q6P9A1 599 aaPredicted RBP33.49■■■□□ 2.95
COL13A1-210ENST00000517713 C1orf115Q9H7X2 142 aa33.48■■■□□ 2.95
COL13A1-210ENST00000517713 VIRMAQ69YN4 1812 aaKnown RBP33.47■■■□□ 2.95
COL13A1-210ENST00000517713 ERICH6Q7L0X2 663 aa33.47■■■□□ 2.95
COL13A1-210ENST00000517713 ERBB3P21860 1342 aa33.47■■■□□ 2.95
COL13A1-210ENST00000517713 LGR6Q9HBX8 967 aa33.46■■■□□ 2.95
COL13A1-210ENST00000517713 STK31Q9BXU1 1019 aa33.46■■■□□ 2.95
COL13A1-210ENST00000517713 CCDC30Q5VVM6 783 aa33.45■■■□□ 2.95
COL13A1-210ENST00000517713 SPATA31A3Q5VYP0 1347 aa33.45■■■□□ 2.95
COL13A1-210ENST00000517713 NOP58Q9Y2X3 529 aaKnown RBP33.45■■■□□ 2.94
COL13A1-210ENST00000517713 BRINP3Q76B58 766 aa33.43■■■□□ 2.94
COL13A1-210ENST00000517713 G2E3Q7L622 706 aa33.43■■■□□ 2.94
COL13A1-210ENST00000517713 ZNF335Q9H4Z2 1342 aaPredicted RBP33.43■■■□□ 2.94
COL13A1-210ENST00000517713 C1orf141Q5JVX7 400 aa33.42■■■□□ 2.94
COL13A1-210ENST00000517713 NUCB1Q02818 461 aa33.41■■■□□ 2.94
COL13A1-210ENST00000517713 CABLES1Q8TDN4 633 aa33.41■■■□□ 2.94
COL13A1-210ENST00000517713 ANP32EQ9BTT0 268 aa33.41■■■□□ 2.94
COL13A1-210ENST00000517713 FAM208AQ9UK61 1670 aaKnown RBP33.41■■■□□ 2.94
COL13A1-210ENST00000517713 GCC1Q96CN9 775 aa33.4■■■□□ 2.94
COL13A1-210ENST00000517713 ZBTB47Q9UFB7 747 aaPredicted RBP33.4■■■□□ 2.94
COL13A1-210ENST00000517713 COL18A1P39060 1754 aa33.4■■■□□ 2.94
COL13A1-210ENST00000517713 SIRT2Q8IXJ6 389 aa33.4■■■□□ 2.94
COL13A1-210ENST00000517713 TEFQ10587 303 aa33.38■■■□□ 2.93
COL13A1-210ENST00000517713 MPRIPQ6WCQ1 1025 aa33.38■■■□□ 2.93
COL13A1-210ENST00000517713 CRYBG1Q9Y4K1 1723 aa33.38■■■□□ 2.93
COL13A1-210ENST00000517713 RNMTO43148 476 aaKnown RBP33.37■■■□□ 2.93
COL13A1-210ENST00000517713 KDM3BQ7LBC6 1761 aa33.37■■■□□ 2.93
COL13A1-210ENST00000517713 NECTIN2Q92692 538 aa33.36■■■□□ 2.93
COL13A1-210ENST00000517713 SLAIN2Q9P270 581 aa33.36■■■□□ 2.93
COL13A1-210ENST00000517713 OVOS2A0A0G2JMS6 1433 aa33.36■■■□□ 2.93
COL13A1-210ENST00000517713 ABCC6O95255 1503 aa33.35■■■□□ 2.93
COL13A1-210ENST00000517713 NLRP2Q9NX02 1062 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms