RNA–Protein interactions for RNA: ENST00000517621.5

TSPAN18-202, Transcript of tetraspanin 18, humanhuman

TSL 3

Gene TSPAN18, Length 827 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-202ENST00000517621 PCDH11XQ9BZA7 1347 aa21.57■■□□□ 1.04
TSPAN18-202ENST00000517621 PCDH11YQ9BZA8 1340 aa21.57■■□□□ 1.04
TSPAN18-202ENST00000517621 DIAPH1O60610 1272 aaKnown RBP21.57■■□□□ 1.04
TSPAN18-202ENST00000517621 PLSCR1O15162 318 aa21.56■■□□□ 1.04
TSPAN18-202ENST00000517621 IL13P35225 146 aa21.56■■□□□ 1.04
TSPAN18-202ENST00000517621 DDX10Q13206 875 aaKnown RBP21.56■■□□□ 1.04
TSPAN18-202ENST00000517621 AMOTQ4VCS5 1084 aa21.55■■□□□ 1.04
TSPAN18-202ENST00000517621 RGPD2P0DJD1 1756 aa21.55■■□□□ 1.04
TSPAN18-202ENST00000517621 HMGB2P26583 209 aaKnown RBP21.54■■□□□ 1.04
TSPAN18-202ENST00000517621 RALBP1Q15311 655 aa21.54■■□□□ 1.04
TSPAN18-202ENST00000517621 MEGF6O75095 1541 aa21.54■■□□□ 1.04
TSPAN18-202ENST00000517621 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
TSPAN18-202ENST00000517621 PLEKHO1Q53GL0 409 aaPredicted RBP21.53■■□□□ 1.04
TSPAN18-202ENST00000517621 DEFB132Q7Z7B7 95 aa21.53■■□□□ 1.04
TSPAN18-202ENST00000517621 NUDCQ9Y266 331 aa21.53■■□□□ 1.04
TSPAN18-202ENST00000517621 PPP2R1AP30153 589 aa21.51■■□□□ 1.03
TSPAN18-202ENST00000517621 EN1Q05925 392 aaPredicted RBP21.51■■□□□ 1.03
TSPAN18-202ENST00000517621 CAMKK2Q96RR4 588 aa21.51■■□□□ 1.03
TSPAN18-202ENST00000517621 HSP90AB1P08238 724 aaKnown RBP21.5■■□□□ 1.03
TSPAN18-202ENST00000517621 SULT6B1Q6IMI4 303 aa21.5■■□□□ 1.03
TSPAN18-202ENST00000517621 IFNL2Q8IZJ0 200 aa21.5■■□□□ 1.03
TSPAN18-202ENST00000517621 KDRP35968 1356 aa21.49■■□□□ 1.03
TSPAN18-202ENST00000517621 ZNF316A6NFI3 1004 aaPredicted RBP21.49■■□□□ 1.03
TSPAN18-202ENST00000517621 NKX1-1Q15270 411 aaPredicted RBP21.49■■□□□ 1.03
TSPAN18-202ENST00000517621 SBF2Q86WG5 1849 aa21.48■■□□□ 1.03
TSPAN18-202ENST00000517621 TNS1Q9HBL0 1735 aaKnown RBP21.46■■□□□ 1.03
TSPAN18-202ENST00000517621 CYP27B1O15528 508 aa21.46■■□□□ 1.03
TSPAN18-202ENST00000517621 NBPF14Q5TI25 921 aa21.46■■□□□ 1.03
TSPAN18-202ENST00000517621 ACSBG1Q96GR2 724 aa21.46■■□□□ 1.03
TSPAN18-202ENST00000517621 KAT6BQ8WYB5 2073 aa21.45■■□□□ 1.02
TSPAN18-202ENST00000517621 KCNQ2O43526 872 aa21.45■■□□□ 1.02
TSPAN18-202ENST00000517621 PRIM1P49642 420 aaKnown RBP21.45■■□□□ 1.02
TSPAN18-202ENST00000517621 EZH2Q15910 746 aaKnown RBP21.45■■□□□ 1.02
TSPAN18-202ENST00000517621 C1orf141Q5JVX7 400 aa21.44■■□□□ 1.02
TSPAN18-202ENST00000517621 SYTL4Q96C24 671 aaPredicted RBP21.44■■□□□ 1.02
TSPAN18-202ENST00000517621 U2SURPO15042 1029 aaKnown RBP21.43■■□□□ 1.02
TSPAN18-202ENST00000517621 PHKG2P15735 406 aa21.43■■□□□ 1.02
TSPAN18-202ENST00000517621 PKD1L3Q7Z443 1732 aa21.43■■□□□ 1.02
TSPAN18-202ENST00000517621 RGPD3A6NKT7 1758 aaPredicted RBP21.42■■□□□ 1.02
TSPAN18-202ENST00000517621 NHSQ6T4R5 1651 aa21.42■■□□□ 1.02
TSPAN18-202ENST00000517621 RGPD4Q7Z3J3 1758 aa21.42■■□□□ 1.02
TSPAN18-202ENST00000517621 DCAF5Q96JK2 942 aa21.42■■□□□ 1.02
TSPAN18-202ENST00000517621 AEBP1Q8IUX7 1158 aa21.41■■□□□ 1.02
TSPAN18-202ENST00000517621 PNNQ9H307 717 aaKnown RBP21.41■■□□□ 1.02
TSPAN18-202ENST00000517621 ERVV-2B6SEH9 535 aa21.4■■□□□ 1.02
TSPAN18-202ENST00000517621 SLC27A3Q5K4L6 730 aa21.4■■□□□ 1.02
TSPAN18-202ENST00000517621 ZNF530Q6P9A1 599 aaPredicted RBP21.4■■□□□ 1.02
TSPAN18-202ENST00000517621 FCHSD2O94868 740 aa21.39■■□□□ 1.01
TSPAN18-202ENST00000517621 SMARCC1Q92922 1105 aaPredicted RBP21.39■■□□□ 1.01
TSPAN18-202ENST00000517621 COL3A1P02461 1466 aaPredicted RBP21.39■■□□□ 1.01
TSPAN18-202ENST00000517621 SHANK3Q9BYB0 1731 aa21.38■■□□□ 1.01
TSPAN18-202ENST00000517621 MYBBP1AQ9BQG0 1328 aaKnown RBP21.38■■□□□ 1.01
TSPAN18-202ENST00000517621 HMOX1P09601 288 aa21.38■■□□□ 1.01
TSPAN18-202ENST00000517621 TXNRD1Q16881 649 aa21.38■■□□□ 1.01
TSPAN18-202ENST00000517621 AKAP4Q5JQC9 854 aa21.38■■□□□ 1.01
TSPAN18-202ENST00000517621 PTF1AQ7RTS3 328 aa21.38■■□□□ 1.01
TSPAN18-202ENST00000517621 NEFMP07197 916 aa21.37■■□□□ 1.01
TSPAN18-202ENST00000517621 U2AF1L5P0DN76 240 aaPredicted RBP21.37■■□□□ 1.01
TSPAN18-202ENST00000517621 U2AF1Q01081 240 aaKnown RBP eCLIP21.37■■□□□ 1.01
TSPAN18-202ENST00000517621 MPRIPQ6WCQ1 1025 aa21.36■■□□□ 1.01
TSPAN18-202ENST00000517621 GAS2L2Q8NHY3 880 aa21.36■■□□□ 1.01
TSPAN18-202ENST00000517621 TMOD3Q9NYL9 352 aa21.36■■□□□ 1.01
TSPAN18-202ENST00000517621 PROM2Q8N271 834 aa21.34■■□□□ 1.01
TSPAN18-202ENST00000517621 PRKRIP1Q9H875 184 aaPredicted RBP21.33■■□□□ 1.01
TSPAN18-202ENST00000517621 BTAF1O14981 1849 aa21.32■■□□□ 1
TSPAN18-202ENST00000517621 CABP4P57796 275 aa21.31■■□□□ 1
TSPAN18-202ENST00000517621 PIGBQ92521 554 aa21.31■■□□□ 1
TSPAN18-202ENST00000517621 RSPH6AQ9H0K4 717 aa21.31■■□□□ 1
TSPAN18-202ENST00000517621 DOT1LQ8TEK3 1739 aa21.31■■□□□ 1
TSPAN18-202ENST00000517621 RREB1Q92766 1687 aa21.31■■□□□ 1
TSPAN18-202ENST00000517621 MTHFSDQ2M296 383 aaKnown RBP21.3■■□□□ 1
TSPAN18-202ENST00000517621 STK32BQ9NY57 414 aa21.3■■□□□ 1
TSPAN18-202ENST00000517621 PRKAR2BP31323 418 aa21.29■■□□□ 1
TSPAN18-202ENST00000517621 GNAT3A8MTJ3 354 aa21.28■■□□□ 1
TSPAN18-202ENST00000517621 R3HDM1Q15032 1099 aaKnown RBP21.27■■□□□ 1
TSPAN18-202ENST00000517621 CCNL1Q9UK58 526 aaPredicted RBP21.27■■□□□ 1
TSPAN18-202ENST00000517621 PALLDQ8WX93 1383 aa21.25■□□□□ 0.99
TSPAN18-202ENST00000517621 ANP32CO43423 234 aa21.25■□□□□ 0.99
TSPAN18-202ENST00000517621 HTATSF1O43719 755 aaKnown RBP21.25■□□□□ 0.99
TSPAN18-202ENST00000517621 SLC15A2Q16348 729 aa21.25■□□□□ 0.99
TSPAN18-202ENST00000517621 NUP188Q5SRE5 1749 aa21.24■□□□□ 0.99
TSPAN18-202ENST00000517621 RNMTO43148 476 aaKnown RBP21.24■□□□□ 0.99
TSPAN18-202ENST00000517621 NFATC2IPQ8NCF5 419 aa21.24■□□□□ 0.99
TSPAN18-202ENST00000517621 ITGB4P16144 1822 aa21.24■□□□□ 0.99
TSPAN18-202ENST00000517621 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
TSPAN18-202ENST00000517621 RTF1Q92541 710 aaKnown RBP21.23■□□□□ 0.99
TSPAN18-202ENST00000517621 SLC52A2Q9HAB3 445 aa21.23■□□□□ 0.99
TSPAN18-202ENST00000517621 LRRC4BQ9NT99 713 aa21.23■□□□□ 0.99
TSPAN18-202ENST00000517621 MAP3K5Q99683 1374 aa21.23■□□□□ 0.99
TSPAN18-202ENST00000517621 KDM6AO15550 1401 aaPredicted RBP21.22■□□□□ 0.99
TSPAN18-202ENST00000517621 PSDA5PKW4 1024 aaPredicted RBP21.22■□□□□ 0.99
TSPAN18-202ENST00000517621 PHACTR3Q96KR7 559 aa21.22■□□□□ 0.99
TSPAN18-202ENST00000517621 ATG3Q9NT62 314 aa21.22■□□□□ 0.99
TSPAN18-202ENST00000517621 LOC102724428A0A0B4J2F2 783 aa21.21■□□□□ 0.99
TSPAN18-202ENST00000517621 SIK1P57059 783 aa21.21■□□□□ 0.99
TSPAN18-202ENST00000517621 ASAP1Q9ULH1 1129 aa21.21■□□□□ 0.99
TSPAN18-202ENST00000517621 MAPK8IP3Q9UPT6 1336 aa21.21■□□□□ 0.99
TSPAN18-202ENST00000517621 LY75O60449 1722 aa21.21■□□□□ 0.99
TSPAN18-202ENST00000517621 TEFQ10587 303 aa21.2■□□□□ 0.98
TSPAN18-202ENST00000517621 FLAD1Q8NFF5 587 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms