RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 RGPD2P0DJD1 1756 aa15.08■□□□□ 0.01
SCARNA20-201ENST00000516768 PLSCR1O15162 318 aa15.08■□□□□ 0
SCARNA20-201ENST00000516768 KCNQ2O43526 872 aa15.08■□□□□ 0
SCARNA20-201ENST00000516768 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.08■□□□□ 0
SCARNA20-201ENST00000516768 MEGF6O75095 1541 aa15.07■□□□□ 0
SCARNA20-201ENST00000516768 DIAPH1O60610 1272 aaKnown RBP15.06■□□□□ 0
SCARNA20-201ENST00000516768 PPP2R1AP30153 589 aa15.06■□□□□ 0
SCARNA20-201ENST00000516768 EZH2Q15910 746 aaKnown RBP15.06■□□□□ 0
SCARNA20-201ENST00000516768 ACSBG1Q96GR2 724 aa15.06■□□□□ 0
SCARNA20-201ENST00000516768 SPG7Q9UQ90 795 aa15.06■□□□□ 0
SCARNA20-201ENST00000516768 WNK3Q9BYP7 1800 aa15.06■□□□□ 0
SCARNA20-201ENST00000516768 CYP27B1O15528 508 aa15.05■□□□□ -0
SCARNA20-201ENST00000516768 SULT6B1Q6IMI4 303 aa15.04■□□□□ -0
SCARNA20-201ENST00000516768 PCDH11XQ9BZA7 1347 aa15.03■□□□□ -0
SCARNA20-201ENST00000516768 PCDH11YQ9BZA8 1340 aa15.03■□□□□ -0
SCARNA20-201ENST00000516768 PRIM1P49642 420 aaKnown RBP15.03■□□□□ -0
SCARNA20-201ENST00000516768 NKX1-1Q15270 411 aaPredicted RBP15.03■□□□□ -0
SCARNA20-201ENST00000516768 AMOTQ4VCS5 1084 aa15.02■□□□□ -0
SCARNA20-201ENST00000516768 PLEKHO1Q53GL0 409 aaPredicted RBP15.02■□□□□ -0
SCARNA20-201ENST00000516768 AEBP1Q8IUX7 1158 aa15.02■□□□□ -0
SCARNA20-201ENST00000516768 PROM2Q8N271 834 aa15.02■□□□□ -0
SCARNA20-201ENST00000516768 PARD3Q8TEW0 1356 aa15.01□□□□□ -0.01
SCARNA20-201ENST00000516768 PLEKHG2Q9H7P9 1386 aa15.01□□□□□ -0.01
SCARNA20-201ENST00000516768 RGPD1P0DJD0 1748 aa15.01□□□□□ -0.01
SCARNA20-201ENST00000516768 ZNF316A6NFI3 1004 aaPredicted RBP15.01□□□□□ -0.01
SCARNA20-201ENST00000516768 IFNL2Q8IZJ0 200 aa15.01□□□□□ -0.01
SCARNA20-201ENST00000516768 CFAP53Q96M91 514 aa15.01□□□□□ -0.01
SCARNA20-201ENST00000516768 KDRP35968 1356 aa15□□□□□ -0.01
SCARNA20-201ENST00000516768 RALBP1Q15311 655 aa15□□□□□ -0.01
SCARNA20-201ENST00000516768 SBF2Q86WG5 1849 aa15□□□□□ -0.01
SCARNA20-201ENST00000516768 HMOX1P09601 288 aa14.99□□□□□ -0.01
SCARNA20-201ENST00000516768 PHKG2P15735 406 aa14.99□□□□□ -0.01
SCARNA20-201ENST00000516768 SYTL4Q96C24 671 aaPredicted RBP14.99□□□□□ -0.01
SCARNA20-201ENST00000516768 KAT6BQ8WYB5 2073 aa14.99□□□□□ -0.01
SCARNA20-201ENST00000516768 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
SCARNA20-201ENST00000516768 NUDCQ9Y266 331 aa14.98□□□□□ -0.01
SCARNA20-201ENST00000516768 TNS1Q9HBL0 1735 aaKnown RBP14.97□□□□□ -0.01
SCARNA20-201ENST00000516768 TXNRD1Q16881 649 aa14.97□□□□□ -0.01
SCARNA20-201ENST00000516768 COL3A1P02461 1466 aaPredicted RBP14.95□□□□□ -0.02
SCARNA20-201ENST00000516768 HSP90AB1P08238 724 aaKnown RBP14.95□□□□□ -0.02
SCARNA20-201ENST00000516768 NBPF14Q5TI25 921 aa14.95□□□□□ -0.02
SCARNA20-201ENST00000516768 ZNF530Q6P9A1 599 aaPredicted RBP14.95□□□□□ -0.02
SCARNA20-201ENST00000516768 MPRIPQ6WCQ1 1025 aa14.95□□□□□ -0.02
SCARNA20-201ENST00000516768 DCAF5Q96JK2 942 aa14.95□□□□□ -0.02
SCARNA20-201ENST00000516768 SHANK3Q9BYB0 1731 aa14.95□□□□□ -0.02
SCARNA20-201ENST00000516768 ERVV-2B6SEH9 535 aa14.94□□□□□ -0.02
SCARNA20-201ENST00000516768 FCHSD2O94868 740 aa14.94□□□□□ -0.02
SCARNA20-201ENST00000516768 C1orf141Q5JVX7 400 aa14.94□□□□□ -0.02
SCARNA20-201ENST00000516768 PIGBQ92521 554 aa14.94□□□□□ -0.02
SCARNA20-201ENST00000516768 U2AF1L5P0DN76 240 aaPredicted RBP14.93□□□□□ -0.02
SCARNA20-201ENST00000516768 U2AF1Q01081 240 aaKnown RBP eCLIP14.93□□□□□ -0.02
SCARNA20-201ENST00000516768 MTHFSDQ2M296 383 aaKnown RBP14.93□□□□□ -0.02
SCARNA20-201ENST00000516768 AKAP4Q5JQC9 854 aa14.93□□□□□ -0.02
SCARNA20-201ENST00000516768 PKD1L3Q7Z443 1732 aa14.92□□□□□ -0.02
SCARNA20-201ENST00000516768 R3HDM1Q15032 1099 aaKnown RBP14.92□□□□□ -0.02
SCARNA20-201ENST00000516768 SLC27A3Q5K4L6 730 aa14.92□□□□□ -0.02
SCARNA20-201ENST00000516768 PRKRIP1Q9H875 184 aaPredicted RBP14.92□□□□□ -0.02
SCARNA20-201ENST00000516768 LRRC4BQ9NT99 713 aa14.92□□□□□ -0.02
SCARNA20-201ENST00000516768 NHSQ6T4R5 1651 aa14.92□□□□□ -0.02
SCARNA20-201ENST00000516768 RSPH6AQ9H0K4 717 aa14.91□□□□□ -0.02
SCARNA20-201ENST00000516768 MYBBP1AQ9BQG0 1328 aaKnown RBP14.91□□□□□ -0.02
SCARNA20-201ENST00000516768 PSDA5PKW4 1024 aaPredicted RBP14.9□□□□□ -0.02
SCARNA20-201ENST00000516768 SMARCC1Q92922 1105 aaPredicted RBP14.9□□□□□ -0.02
SCARNA20-201ENST00000516768 PHACTR3Q96KR7 559 aa14.9□□□□□ -0.02
SCARNA20-201ENST00000516768 LGR6Q9HBX8 967 aa14.9□□□□□ -0.02
SCARNA20-201ENST00000516768 TMOD3Q9NYL9 352 aa14.9□□□□□ -0.02
SCARNA20-201ENST00000516768 PRKAR2BP31323 418 aa14.89□□□□□ -0.03
SCARNA20-201ENST00000516768 CABP4P57796 275 aa14.89□□□□□ -0.03
SCARNA20-201ENST00000516768 BTAF1O14981 1849 aa14.88□□□□□ -0.03
SCARNA20-201ENST00000516768 KCNQ4P56696 695 aa14.88□□□□□ -0.03
SCARNA20-201ENST00000516768 SLC15A2Q16348 729 aa14.88□□□□□ -0.03
SCARNA20-201ENST00000516768 NFATC2IPQ8NCF5 419 aa14.88□□□□□ -0.03
SCARNA20-201ENST00000516768 ASAP1Q9ULH1 1129 aa14.88□□□□□ -0.03
SCARNA20-201ENST00000516768 RNMTO43148 476 aaKnown RBP14.87□□□□□ -0.03
SCARNA20-201ENST00000516768 HMGB2P26583 209 aaKnown RBP14.87□□□□□ -0.03
SCARNA20-201ENST00000516768 GAS2L2Q8NHY3 880 aa14.87□□□□□ -0.03
SCARNA20-201ENST00000516768 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
SCARNA20-201ENST00000516768 ATG3Q9NT62 314 aa14.87□□□□□ -0.03
SCARNA20-201ENST00000516768 CCNL1Q9UK58 526 aaPredicted RBP14.87□□□□□ -0.03
SCARNA20-201ENST00000516768 RGPD3A6NKT7 1758 aaPredicted RBP14.87□□□□□ -0.03
SCARNA20-201ENST00000516768 RGPD4Q7Z3J3 1758 aa14.87□□□□□ -0.03
SCARNA20-201ENST00000516768 GNAT3A8MTJ3 354 aa14.86□□□□□ -0.03
SCARNA20-201ENST00000516768 STK32BQ9NY57 414 aa14.86□□□□□ -0.03
SCARNA20-201ENST00000516768 DOT1LQ8TEK3 1739 aa14.86□□□□□ -0.03
SCARNA20-201ENST00000516768 KDM6AO15550 1401 aaPredicted RBP14.85□□□□□ -0.03
SCARNA20-201ENST00000516768 RREB1Q92766 1687 aa14.85□□□□□ -0.03
SCARNA20-201ENST00000516768 IL17REQ8NFR9 667 aa14.85□□□□□ -0.03
SCARNA20-201ENST00000516768 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
SCARNA20-201ENST00000516768 PLEKHF1Q96S99 279 aa14.85□□□□□ -0.03
SCARNA20-201ENST00000516768 PNNQ9H307 717 aaKnown RBP14.85□□□□□ -0.03
SCARNA20-201ENST00000516768 SLC52A2Q9HAB3 445 aa14.85□□□□□ -0.03
SCARNA20-201ENST00000516768 PALLDQ8WX93 1383 aa14.85□□□□□ -0.03
SCARNA20-201ENST00000516768 LOC102724428A0A0B4J2F2 783 aa14.83□□□□□ -0.04
SCARNA20-201ENST00000516768 SIK1P57059 783 aa14.83□□□□□ -0.04
SCARNA20-201ENST00000516768 NUP188Q5SRE5 1749 aa14.83□□□□□ -0.04
SCARNA20-201ENST00000516768 ITGB4P16144 1822 aa14.82□□□□□ -0.04
SCARNA20-201ENST00000516768 NEFMP07197 916 aa14.82□□□□□ -0.04
SCARNA20-201ENST00000516768 TOGARAM1Q9Y4F4 1720 aa14.82□□□□□ -0.04
SCARNA20-201ENST00000516768 HTATSF1O43719 755 aaKnown RBP14.81□□□□□ -0.04
SCARNA20-201ENST00000516768 ATP6V1AP38606 617 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms