RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.88□□□□□ -0.99
NIPBL-208ENST00000514335 MORC4Q8TE76 937 aa8.88□□□□□ -0.99
NIPBL-208ENST00000514335 CDCA7Q9BWT1 371 aaPredicted RBP8.88□□□□□ -0.99
NIPBL-208ENST00000514335 RANBP17Q9H2T7 1088 aaKnown RBP8.88□□□□□ -0.99
NIPBL-208ENST00000514335 MTERF4Q7Z6M4 381 aaKnown RBP8.88□□□□□ -0.99
NIPBL-208ENST00000514335 TPX2Q9ULW0 747 aaKnown RBP8.88□□□□□ -0.99
NIPBL-208ENST00000514335 VWDEQ8N2E2 1590 aa8.88□□□□□ -0.99
NIPBL-208ENST00000514335 CDC42BPAQ5VT25 1732 aa8.88□□□□□ -0.99
NIPBL-208ENST00000514335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-208ENST00000514335 U2AF1L5P0DN76 240 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-208ENST00000514335 U2AF1Q01081 240 aaKnown RBP eCLIP8.87□□□□□ -0.99
NIPBL-208ENST00000514335 SAMD9LQ8IVG5 1584 aa8.87□□□□□ -0.99
NIPBL-208ENST00000514335 ECEL1O95672 775 aa8.87□□□□□ -0.99
NIPBL-208ENST00000514335 GYS2P54840 703 aa8.87□□□□□ -0.99
NIPBL-208ENST00000514335 UBA5Q9GZZ9 404 aa8.87□□□□□ -0.99
NIPBL-208ENST00000514335 LAMC1P11047 1609 aa8.87□□□□□ -0.99
NIPBL-208ENST00000514335 NEURL4Q96JN8 1562 aa8.87□□□□□ -0.99
NIPBL-208ENST00000514335 FAM163BP0C2L3 166 aa8.87□□□□□ -0.99
NIPBL-208ENST00000514335 NOL10Q9BSC4 688 aaKnown RBP8.87□□□□□ -0.99
NIPBL-208ENST00000514335 METTL14Q9HCE5 456 aaKnown RBP8.87□□□□□ -0.99
NIPBL-208ENST00000514335 ATF5Q9Y2D1 282 aaPredicted RBP8.87□□□□□ -0.99
NIPBL-208ENST00000514335 FYCO1Q9BQS8 1478 aa8.86□□□□□ -0.99
NIPBL-208ENST00000514335 ZNF232Q9UNY5 417 aa8.86□□□□□ -0.99
NIPBL-208ENST00000514335 IPO7O95373 1038 aaKnown RBP8.86□□□□□ -0.99
NIPBL-208ENST00000514335 ABCD1P33897 745 aa8.86□□□□□ -0.99
NIPBL-208ENST00000514335 MCCD1P59942 119 aaPredicted RBP8.86□□□□□ -0.99
NIPBL-208ENST00000514335 E2F5Q15329 346 aa8.86□□□□□ -0.99
NIPBL-208ENST00000514335 FAM161AQ3B820 660 aa8.86□□□□□ -0.99
NIPBL-208ENST00000514335 FAM200BP0CF97 657 aa8.85□□□□□ -0.99
NIPBL-208ENST00000514335 MS4A1P11836 297 aa8.85□□□□□ -0.99
NIPBL-208ENST00000514335 C11orf96Q7Z7L8 435 aa8.85□□□□□ -0.99
NIPBL-208ENST00000514335 SUDS3Q9H7L9 328 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-208ENST00000514335 ATP7AQ04656 1500 aa8.85□□□□□ -0.99
NIPBL-208ENST00000514335 TULP2O00295 520 aa8.85□□□□□ -0.99
NIPBL-208ENST00000514335 CTAGE5O15320 804 aa8.85□□□□□ -0.99
NIPBL-208ENST00000514335 CD151P48509 253 aa8.85□□□□□ -0.99
NIPBL-208ENST00000514335 GTF2A1P52655 376 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-208ENST00000514335 MAGEC2Q9UBF1 373 aaPredicted RBP8.85□□□□□ -0.99
NIPBL-208ENST00000514335 ZRANB2O95218 330 aaKnown RBP eCLIP8.84□□□□□ -0.99
NIPBL-208ENST00000514335 LIG1P18858 919 aa8.84□□□□□ -0.99
NIPBL-208ENST00000514335 LRCH2Q5VUJ6 765 aa8.84□□□□□ -0.99
NIPBL-208ENST00000514335 C22orf23Q9BZE7 217 aa8.84□□□□□ -0.99
NIPBL-208ENST00000514335 KIAA1522Q9P206 1035 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-208ENST00000514335 DNMT1P26358 1616 aaKnown RBP8.84□□□□□ -0.99
NIPBL-208ENST00000514335 HMGN5P82970 282 aaKnown RBP8.84□□□□□ -0.99
NIPBL-208ENST00000514335 NUCKS1Q9H1E3 243 aaKnown RBP8.84□□□□□ -0.99
NIPBL-208ENST00000514335 SYNPO2Q9UMS6 1093 aa8.84□□□□□ -0.99
NIPBL-208ENST00000514335 CFAP69A5D8W1 941 aa8.84□□□□□ -0.99
NIPBL-208ENST00000514335 CAND2O75155 1236 aa8.84□□□□□ -0.99
NIPBL-208ENST00000514335 DUSP27Q5VZP5 1158 aa8.84□□□□□ -0.99
NIPBL-208ENST00000514335 TNPO1Q92973 898 aaKnown RBP8.84□□□□□ -0.99
NIPBL-208ENST00000514335 FAM212AQ96EL1 285 aa8.84□□□□□ -0.99
NIPBL-208ENST00000514335 RMI1Q9H9A7 625 aa8.84□□□□□ -0.99
NIPBL-208ENST00000514335 IQSEC3Q9UPP2 1182 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-208ENST00000514335 MAP3K1Q13233 1512 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 DIP2AQ14689 1571 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 PZPP20742 1482 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 TPM3P06753 285 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 NFKBIBQ15653 356 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 C16orf87Q6PH81 154 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 GNL3LQ9NVN8 582 aaKnown RBP8.83□□□□□ -1
NIPBL-208ENST00000514335 WDR70Q9NW82 654 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 SLIT1O75093 1534 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 BARGINQ6ZT62 677 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 LRRC27Q9C0I9 530 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 KLF15Q9UIH9 416 aa8.83□□□□□ -1
NIPBL-208ENST00000514335 DIS3Q9Y2L1 958 aaKnown RBP8.83□□□□□ -1
NIPBL-208ENST00000514335 CAMSAP1Q5T5Y3 1602 aa8.82□□□□□ -1
NIPBL-208ENST00000514335 WDHD1O75717 1129 aaPredicted RBP8.82□□□□□ -1
NIPBL-208ENST00000514335 PHC3Q8NDX5 983 aa8.82□□□□□ -1
NIPBL-208ENST00000514335 PPP1R12AO14974 1030 aaPredicted RBP8.82□□□□□ -1
NIPBL-208ENST00000514335 SKAP1Q86WV1 359 aa8.82□□□□□ -1
NIPBL-208ENST00000514335 CXorf56Q9H5V9 222 aa8.82□□□□□ -1
NIPBL-208ENST00000514335 IQGAP1P46940 1657 aa8.82□□□□□ -1
NIPBL-208ENST00000514335 LMTK2Q8IWU2 1503 aa8.82□□□□□ -1
NIPBL-208ENST00000514335 U2SURPO15042 1029 aaKnown RBP8.81□□□□□ -1
NIPBL-208ENST00000514335 SUFUQ9UMX1 484 aa8.81□□□□□ -1
NIPBL-208ENST00000514335 CASKIN1Q8WXD9 1431 aa8.81□□□□□ -1
NIPBL-208ENST00000514335 KIF1CO43896 1103 aaKnown RBP8.81□□□□□ -1
NIPBL-208ENST00000514335 TERF1P54274 439 aa8.81□□□□□ -1
NIPBL-208ENST00000514335 MORC1Q86VD1 984 aa8.81□□□□□ -1
NIPBL-208ENST00000514335 SMC5Q8IY18 1101 aa8.81□□□□□ -1
NIPBL-208ENST00000514335 JMYQ8N9B5 988 aa8.81□□□□□ -1
NIPBL-208ENST00000514335 MECOMQ03112 1051 aa8.81□□□□□ -1
NIPBL-208ENST00000514335 ZNF396Q96N95 335 aaPredicted RBP8.81□□□□□ -1
NIPBL-208ENST00000514335 LRRIQ1Q96JM4 1722 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 CCDC194A0A1B0GVG4 234 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 FLT3P36888 993 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 C11orf91Q3C1V1 193 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 RSPH1Q8WYR4 309 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 CCDC85AQ96PX6 553 aaPredicted RBP8.8□□□□□ -1
NIPBL-208ENST00000514335 FMNL2Q96PY5 1086 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 TSPYL1Q9H0U9 437 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 ARHGAP31Q2M1Z3 1444 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 FGD6Q6ZV73 1430 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 ARHGAP23Q9P227 1491 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 UGGT1Q9NYU2 1555 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 PPP4CP60510 307 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 CCDC15Q0P6D6 951 aa8.8□□□□□ -1
NIPBL-208ENST00000514335 IFT88Q13099 833 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms