RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 EVA1BQ9NVM1 165 aa12.15□□□□□ -0.46
DDX60-205ENST00000513997 CUEDC1Q9NWM3 386 aaPredicted RBP12.15□□□□□ -0.46
DDX60-205ENST00000513997 TMA7Q9Y2S6 64 aaKnown RBP12.15□□□□□ -0.46
DDX60-205ENST00000513997 ATP5J2-PTCD1G3V325 749 aa12.14□□□□□ -0.47
DDX60-205ENST00000513997 MARCH6O60337 910 aa12.14□□□□□ -0.47
DDX60-205ENST00000513997 ICMTO60725 284 aa12.14□□□□□ -0.47
DDX60-205ENST00000513997 ABL1P00519 1130 aa12.14□□□□□ -0.47
DDX60-205ENST00000513997 CCNYL3P0C7X3 344 aa12.14□□□□□ -0.47
DDX60-205ENST00000513997 C9orf131Q5VYM1 1079 aa12.14□□□□□ -0.47
DDX60-205ENST00000513997 FAM174AQ8TBP5 190 aa12.14□□□□□ -0.47
DDX60-205ENST00000513997 DNAJC2Q99543 621 aaKnown RBP12.14□□□□□ -0.47
DDX60-205ENST00000513997 DCTN4Q9UJW0 460 aa12.14□□□□□ -0.47
DDX60-205ENST00000513997 EAPPQ56P03 285 aaPredicted RBP12.13□□□□□ -0.47
DDX60-205ENST00000513997 ZSCAN29Q8IWY8 852 aaPredicted RBP12.13□□□□□ -0.47
DDX60-205ENST00000513997 BRPF3Q9ULD4 1205 aa12.13□□□□□ -0.47
DDX60-205ENST00000513997 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
DDX60-205ENST00000513997 RAD51AP2Q09MP3 1159 aa12.12□□□□□ -0.47
DDX60-205ENST00000513997 ZNF211Q13398 564 aaPredicted RBP12.12□□□□□ -0.47
DDX60-205ENST00000513997 GLYCTKQ8IVS8 523 aa12.12□□□□□ -0.47
DDX60-205ENST00000513997 MAP10Q9P2G4 905 aa12.12□□□□□ -0.47
DDX60-205ENST00000513997 KCNH2Q12809 1159 aa12.11□□□□□ -0.47
DDX60-205ENST00000513997 RNF135Q8IUD6 432 aa12.11□□□□□ -0.47
DDX60-205ENST00000513997 CTHP32929 405 aa12.1□□□□□ -0.47
DDX60-205ENST00000513997 TAS1R3Q7RTX0 852 aa12.1□□□□□ -0.47
DDX60-205ENST00000513997 FAM9AQ8IZU1 332 aaPredicted RBP12.1□□□□□ -0.47
DDX60-205ENST00000513997 TLDC2A0PJX2 215 aa12.09□□□□□ -0.47
DDX60-205ENST00000513997 DPYDQ12882 1025 aa12.09□□□□□ -0.47
DDX60-205ENST00000513997 NCOA4Q13772 614 aa12.09□□□□□ -0.47
DDX60-205ENST00000513997 TINF2Q9BSI4 451 aa12.09□□□□□ -0.47
DDX60-205ENST00000513997 ZBBXA8MT70 800 aa12.08□□□□□ -0.48
DDX60-205ENST00000513997 PPEF1O14829 653 aaPredicted RBP12.08□□□□□ -0.48
DDX60-205ENST00000513997 LDLRAD1Q5T700 205 aa12.08□□□□□ -0.48
DDX60-205ENST00000513997 CCDC24Q8N4L8 307 aa12.08□□□□□ -0.48
DDX60-205ENST00000513997 ANO2Q9NQ90 1003 aa12.08□□□□□ -0.48
DDX60-205ENST00000513997 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.48
DDX60-205ENST00000513997 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
DDX60-205ENST00000513997 C21orf2O43822 256 aa12.07□□□□□ -0.48
DDX60-205ENST00000513997 ECM1Q16610 540 aa12.07□□□□□ -0.48
DDX60-205ENST00000513997 PTCRAQ6ISU1 281 aaPredicted RBP12.07□□□□□ -0.48
DDX60-205ENST00000513997 SLC43A3Q8NBI5 491 aa12.07□□□□□ -0.48
DDX60-205ENST00000513997 SBNO2Q9Y2G9 1366 aa12.06□□□□□ -0.48
DDX60-205ENST00000513997 IFFO2Q5TF58 517 aa12.06□□□□□ -0.48
DDX60-205ENST00000513997 CC2D2BQ6DHV5 1058 aa12.06□□□□□ -0.48
DDX60-205ENST00000513997 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
DDX60-205ENST00000513997 RGL4Q8IZJ4 473 aa12.06□□□□□ -0.48
DDX60-205ENST00000513997 MICAL1Q8TDZ2 1067 aa12.06□□□□□ -0.48
DDX60-205ENST00000513997 PRKAG2Q9UGJ0 569 aa12.06□□□□□ -0.48
DDX60-205ENST00000513997 GGCXP38435 758 aa12.05□□□□□ -0.48
DDX60-205ENST00000513997 METTL16Q86W50 562 aaKnown RBP12.05□□□□□ -0.48
DDX60-205ENST00000513997 NT5DC4Q86YG4 428 aa12.05□□□□□ -0.48
DDX60-205ENST00000513997 DHX38Q92620 1227 aaKnown RBP12.05□□□□□ -0.48
DDX60-205ENST00000513997 CXXC1Q9P0U4 656 aaPredicted RBP12.05□□□□□ -0.48
DDX60-205ENST00000513997 FKBPLQ9UIM3 349 aa12.05□□□□□ -0.48
DDX60-205ENST00000513997 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.05□□□□□ -0.48
DDX60-205ENST00000513997 PRMT3O60678 531 aa12.04□□□□□ -0.48
DDX60-205ENST00000513997 CCDC144BQ3MJ40 725 aa12.04□□□□□ -0.48
DDX60-205ENST00000513997 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.04□□□□□ -0.48
DDX60-205ENST00000513997 RAB11FIP3O75154 756 aa12.03□□□□□ -0.48
DDX60-205ENST00000513997 ATP2B1P20020 1258 aa12.03□□□□□ -0.48
DDX60-205ENST00000513997 OCLNQ16625 522 aa12.03□□□□□ -0.48
DDX60-205ENST00000513997 OGFOD1Q8N543 542 aa12.03□□□□□ -0.48
DDX60-205ENST00000513997 ANKLE1Q8NAG6 615 aa12.03□□□□□ -0.48
DDX60-205ENST00000513997 ARMC5Q96C12 935 aa12.03□□□□□ -0.48
DDX60-205ENST00000513997 UNC93B1Q9H1C4 597 aa12.03□□□□□ -0.48
DDX60-205ENST00000513997 ARHGAP4P98171 946 aa12.02□□□□□ -0.49
DDX60-205ENST00000513997 EGFLAMQ63HQ2 1017 aa12.02□□□□□ -0.49
DDX60-205ENST00000513997 SDE2Q6IQ49 451 aa12.02□□□□□ -0.49
DDX60-205ENST00000513997 LARGE2Q8N3Y3 721 aa12.02□□□□□ -0.49
DDX60-205ENST00000513997 PSMD1Q99460 953 aa12.02□□□□□ -0.49
DDX60-205ENST00000513997 NLRP2Q9NX02 1062 aa12.02□□□□□ -0.49
DDX60-205ENST00000513997 ARMC2Q8NEN0 867 aa12.01□□□□□ -0.49
DDX60-205ENST00000513997 ZNF592Q92610 1267 aa12.01□□□□□ -0.49
DDX60-205ENST00000513997 TGIF2Q9GZN2 237 aa12.01□□□□□ -0.49
DDX60-205ENST00000513997 P4HBP07237 508 aaKnown RBP12□□□□□ -0.49
DDX60-205ENST00000513997 PLA2G2CQ5R387 149 aa12□□□□□ -0.49
DDX60-205ENST00000513997 ZNF594Q96JF6 807 aaPredicted RBP12□□□□□ -0.49
DDX60-205ENST00000513997 PLA2G2EQ9NZK7 142 aa12□□□□□ -0.49
DDX60-205ENST00000513997 GTF2F1P35269 517 aaKnown RBP eCLIP11.99□□□□□ -0.49
DDX60-205ENST00000513997 CLDN10P78369 228 aa11.99□□□□□ -0.49
DDX60-205ENST00000513997 SLFNL1Q499Z3 407 aa11.99□□□□□ -0.49
DDX60-205ENST00000513997 PLPP7Q8NBV4 271 aa11.99□□□□□ -0.49
DDX60-205ENST00000513997 GTF3C2Q8WUA4 911 aaPredicted RBP11.99□□□□□ -0.49
DDX60-205ENST00000513997 GPATCH3Q96I76 525 aa11.99□□□□□ -0.49
DDX60-205ENST00000513997 PRIMPOLQ96LW4 560 aa11.99□□□□□ -0.49
DDX60-205ENST00000513997 TBX22Q9Y458 520 aa11.99□□□□□ -0.49
DDX60-205ENST00000513997 FKBP4Q02790 459 aaKnown RBP eCLIP11.98□□□□□ -0.49
DDX60-205ENST00000513997 SF3B2Q13435 895 aaKnown RBP11.98□□□□□ -0.49
DDX60-205ENST00000513997 TMEM87AQ8NBN3 555 aa11.98□□□□□ -0.49
DDX60-205ENST00000513997 CCSER2Q9H7U1 834 aa11.98□□□□□ -0.49
DDX60-205ENST00000513997 CAPN10Q9HC96 672 aa11.98□□□□□ -0.49
DDX60-205ENST00000513997 DNAAF2Q9NVR5 837 aaKnown RBP11.98□□□□□ -0.49
DDX60-205ENST00000513997 CEP126Q9P2H0 1117 aa11.98□□□□□ -0.49
DDX60-205ENST00000513997 TRIM50Q86XT4 487 aa11.97□□□□□ -0.49
DDX60-205ENST00000513997 GPKOWQ92917 476 aaPredicted RBP eCLIP11.97□□□□□ -0.49
DDX60-205ENST00000513997 IQSEC3Q9UPP2 1182 aaPredicted RBP11.97□□□□□ -0.49
DDX60-205ENST00000513997 PPME1Q9Y570 386 aa11.97□□□□□ -0.49
DDX60-205ENST00000513997 DNMT3AQ9Y6K1 912 aaPredicted RBP11.97□□□□□ -0.49
DDX60-205ENST00000513997 DKK1O94907 266 aa11.96□□□□□ -0.49
DDX60-205ENST00000513997 EML3Q32P44 896 aa11.96□□□□□ -0.49
DDX60-205ENST00000513997 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms